RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
RRP8-201ENST00000254605 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
RRP8-201ENST00000254605 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
RRP8-201ENST00000254605 DNAH3Q8TD57 4116 aa3.73□□□□□ -1.81
RRP8-201ENST00000254605 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
RRP8-201ENST00000254605 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
RRP8-201ENST00000254605 ANK2Q01484 3957 aa3.71□□□□□ -1.82
RRP8-201ENST00000254605 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
RRP8-201ENST00000254605 KRTAP3-2Q9BYR7 98 aa3.65□□□□□ -1.82
RRP8-201ENST00000254605 DNAH10Q8IVF4 4471 aa3.64□□□□□ -1.83
RRP8-201ENST00000254605 INE1O15225 51 aa3.63□□□□□ -1.83
RRP8-201ENST00000254605 KMT2AQ03164 3969 aa3.62□□□□□ -1.83
RRP8-201ENST00000254605 PLECQ15149 4684 aaKnown RBP3.61□□□□□ -1.83
RRP8-201ENST00000254605 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
RRP8-201ENST00000254605 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
RRP8-201ENST00000254605 PRKDCP78527 4128 aaKnown RBP3.57□□□□□ -1.84
RRP8-201ENST00000254605 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
RRP8-201ENST00000254605 VPS13DQ5THJ4 4388 aa3.56□□□□□ -1.84
RRP8-201ENST00000254605 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
RRP8-201ENST00000254605 DNAH6Q9C0G6 4158 aa3.55□□□□□ -1.84
RRP8-201ENST00000254605 LYSTQ99698 3801 aa3.55□□□□□ -1.84
RRP8-201ENST00000254605 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
RRP8-201ENST00000254605 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
RRP8-201ENST00000254605 DNAH7Q8WXX0 4024 aa3.53□□□□□ -1.84
RRP8-201ENST00000254605 DYNC2H1Q8NCM8 4307 aaKnown RBP3.52□□□□□ -1.85
RRP8-201ENST00000254605 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
RRP8-201ENST00000254605 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
RRP8-201ENST00000254605 MT1HP80294 61 aa3.5□□□□□ -1.85
RRP8-201ENST00000254605 DNAH5Q8TE73 4624 aa3.49□□□□□ -1.85
RRP8-201ENST00000254605 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
RRP8-201ENST00000254605 LRP1BQ9NZR2 4599 aa3.44□□□□□ -1.86
RRP8-201ENST00000254605 SPRR2EP22531 72 aa3.44□□□□□ -1.86
RRP8-201ENST00000254605 SPRR2BP35325 72 aa3.44□□□□□ -1.86
RRP8-201ENST00000254605 SPRR2AP35326 72 aa3.44□□□□□ -1.86
RRP8-201ENST00000254605 VPS13BQ7Z7G8 4022 aa3.44□□□□□ -1.86
RRP8-201ENST00000254605 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
RRP8-201ENST00000254605 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.86
RRP8-201ENST00000254605 MT2AP02795 61 aa3.4□□□□□ -1.87
RRP8-201ENST00000254605 DNAH8Q96JB1 4490 aa3.39□□□□□ -1.87
RRP8-201ENST00000254605 DNHD1Q96M86 4753 aa3.39□□□□□ -1.87
RRP8-201ENST00000254605 HECTD4Q9Y4D8 3996 aa3.37□□□□□ -1.87
RRP8-201ENST00000254605 MT1FP04733 61 aa3.35□□□□□ -1.87
RRP8-201ENST00000254605 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
RRP8-201ENST00000254605 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
RRP8-201ENST00000254605 FAT1Q14517 4588 aa3.32□□□□□ -1.88
RRP8-201ENST00000254605 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
RRP8-201ENST00000254605 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
RRP8-201ENST00000254605 SPRR2DP22532 72 aa3.31□□□□□ -1.88
RRP8-201ENST00000254605 HSPG2P98160 4391 aa3.26□□□□□ -1.89
RRP8-201ENST00000254605 RYR1P21817 5038 aa3.26□□□□□ -1.89
RRP8-201ENST00000254605 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
RRP8-201ENST00000254605 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
RRP8-201ENST00000254605 APOBP04114 4563 aaKnown RBP3.24□□□□□ -1.89
RRP8-201ENST00000254605 MT1GP13640 62 aa3.23□□□□□ -1.89
RRP8-201ENST00000254605 LCE2BO14633 110 aa3.2□□□□□ -1.9
RRP8-201ENST00000254605 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
RRP8-201ENST00000254605 HYDINQ4G0P3 5121 aa3.17□□□□□ -1.9
RRP8-201ENST00000254605 RYR2Q92736 4967 aa3.16□□□□□ -1.9
RRP8-201ENST00000254605 PKD1P98161 4303 aa3.16□□□□□ -1.9
RRP8-201ENST00000254605 PKHD1P08F94 4074 aa3.15□□□□□ -1.9
RRP8-201ENST00000254605 LPAP08519 4548 aa3.14□□□□□ -1.91
RRP8-201ENST00000254605 RYR3Q15413 4870 aa3.14□□□□□ -1.91
RRP8-201ENST00000254605 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
RRP8-201ENST00000254605 TNXBP22105 4242 aa3.12□□□□□ -1.91
RRP8-201ENST00000254605 HERC1Q15751 4861 aa3.11□□□□□ -1.91
RRP8-201ENST00000254605 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
RRP8-201ENST00000254605 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
RRP8-201ENST00000254605 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
RRP8-201ENST00000254605 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
RRP8-201ENST00000254605 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.92
RRP8-201ENST00000254605 MT4P47944 62 aa3.09□□□□□ -1.92
RRP8-201ENST00000254605 MYCBP2O75592 4640 aa3.08□□□□□ -1.92
RRP8-201ENST00000254605 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
RRP8-201ENST00000254605 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
RRP8-201ENST00000254605 KRTAP19-1Q8IUB9 90 aa3.05□□□□□ -1.92
RRP8-201ENST00000254605 LCE2DQ5TA82 110 aaPredicted RBP3.04□□□□□ -1.92
RRP8-201ENST00000254605 MT1XP80297 61 aa2.99□□□□□ -1.93
RRP8-201ENST00000254605 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
RRP8-201ENST00000254605 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
RRP8-201ENST00000254605 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
RRP8-201ENST00000254605 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
RRP8-201ENST00000254605 KRTAP9-8Q9BYQ0 159 aa2.96□□□□□ -1.94
RRP8-201ENST00000254605 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
RRP8-201ENST00000254605 MT1BP07438 61 aa2.95□□□□□ -1.94
RRP8-201ENST00000254605 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
RRP8-201ENST00000254605 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
RRP8-201ENST00000254605 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
RRP8-201ENST00000254605 HERC2O95714 4834 aa2.9□□□□□ -1.95
RRP8-201ENST00000254605 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
RRP8-201ENST00000254605 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
RRP8-201ENST00000254605 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
RRP8-201ENST00000254605 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
RRP8-201ENST00000254605 LRP2P98164 4655 aa2.84□□□□□ -1.95
RRP8-201ENST00000254605 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.96
RRP8-201ENST00000254605 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
RRP8-201ENST00000254605 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
RRP8-201ENST00000254605 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
RRP8-201ENST00000254605 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
RRP8-201ENST00000254605 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
RRP8-201ENST00000254605 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms