RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
UBE4B-201ENST00000253251 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
UBE4B-201ENST00000253251 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
UBE4B-201ENST00000253251 DNHD1Q96M86 4753 aa6.78□□□□□ -1.32
UBE4B-201ENST00000253251 DYNC1H1Q14204 4646 aaKnown RBP6.68□□□□□ -1.34
UBE4B-201ENST00000253251 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
UBE4B-201ENST00000253251 ANK2Q01484 3957 aa6.63□□□□□ -1.35
UBE4B-201ENST00000253251 STARD9Q9P2P6 4700 aa6.6□□□□□ -1.35
UBE4B-201ENST00000253251 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.35
UBE4B-201ENST00000253251 LRP1BQ9NZR2 4599 aa6.57□□□□□ -1.36
UBE4B-201ENST00000253251 DNAH3Q8TD57 4116 aa6.56□□□□□ -1.36
UBE4B-201ENST00000253251 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
UBE4B-201ENST00000253251 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
UBE4B-201ENST00000253251 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
UBE4B-201ENST00000253251 FAT2Q9NYQ8 4349 aa6.5□□□□□ -1.37
UBE4B-201ENST00000253251 SACSQ9NZJ4 4579 aa6.49□□□□□ -1.37
UBE4B-201ENST00000253251 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
UBE4B-201ENST00000253251 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
UBE4B-201ENST00000253251 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
UBE4B-201ENST00000253251 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-201ENST00000253251 FAT1Q14517 4588 aa6.41□□□□□ -1.38
UBE4B-201ENST00000253251 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
UBE4B-201ENST00000253251 MT1HP80294 61 aa6.37□□□□□ -1.39
UBE4B-201ENST00000253251 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
UBE4B-201ENST00000253251 RYR1P21817 5038 aa6.35□□□□□ -1.39
UBE4B-201ENST00000253251 INE1O15225 51 aa6.35□□□□□ -1.39
UBE4B-201ENST00000253251 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
UBE4B-201ENST00000253251 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
UBE4B-201ENST00000253251 MT2AP02795 61 aa6.26□□□□□ -1.41
UBE4B-201ENST00000253251 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
UBE4B-201ENST00000253251 RYR2Q92736 4967 aa6.23□□□□□ -1.41
UBE4B-201ENST00000253251 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
UBE4B-201ENST00000253251 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
UBE4B-201ENST00000253251 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
UBE4B-201ENST00000253251 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
UBE4B-201ENST00000253251 RYR3Q15413 4870 aa6.18□□□□□ -1.42
UBE4B-201ENST00000253251 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
UBE4B-201ENST00000253251 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
UBE4B-201ENST00000253251 MT1FP04733 61 aa6.1□□□□□ -1.43
UBE4B-201ENST00000253251 DNAH7Q8WXX0 4024 aa6.1□□□□□ -1.43
UBE4B-201ENST00000253251 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
UBE4B-201ENST00000253251 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
UBE4B-201ENST00000253251 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
UBE4B-201ENST00000253251 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
UBE4B-201ENST00000253251 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
UBE4B-201ENST00000253251 HSPG2P98160 4391 aa5.93□□□□□ -1.46
UBE4B-201ENST00000253251 LYSTQ99698 3801 aa5.92□□□□□ -1.46
UBE4B-201ENST00000253251 HERC1Q15751 4861 aa5.92□□□□□ -1.46
UBE4B-201ENST00000253251 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
UBE4B-201ENST00000253251 HERC2O95714 4834 aa5.89□□□□□ -1.47
UBE4B-201ENST00000253251 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
UBE4B-201ENST00000253251 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
UBE4B-201ENST00000253251 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
UBE4B-201ENST00000253251 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
UBE4B-201ENST00000253251 HYDINQ4G0P3 5121 aa5.83□□□□□ -1.48
UBE4B-201ENST00000253251 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
UBE4B-201ENST00000253251 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
UBE4B-201ENST00000253251 PKD1P98161 4303 aa5.73□□□□□ -1.49
UBE4B-201ENST00000253251 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
UBE4B-201ENST00000253251 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
UBE4B-201ENST00000253251 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
UBE4B-201ENST00000253251 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
UBE4B-201ENST00000253251 MT1BP07438 61 aa5.66□□□□□ -1.5
UBE4B-201ENST00000253251 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
UBE4B-201ENST00000253251 MT1XP80297 61 aa5.62□□□□□ -1.51
UBE4B-201ENST00000253251 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
UBE4B-201ENST00000253251 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
UBE4B-201ENST00000253251 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
UBE4B-201ENST00000253251 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.52
UBE4B-201ENST00000253251 LRP2P98164 4655 aa5.57□□□□□ -1.52
UBE4B-201ENST00000253251 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-201ENST00000253251 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
UBE4B-201ENST00000253251 KMT2CQ8NEZ4 4911 aaKnown RBP5.54□□□□□ -1.52
UBE4B-201ENST00000253251 TNXBP22105 4242 aa5.48□□□□□ -1.53
UBE4B-201ENST00000253251 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
UBE4B-201ENST00000253251 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
UBE4B-201ENST00000253251 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
UBE4B-201ENST00000253251 LPAP08519 4548 aa5.31□□□□□ -1.56
UBE4B-201ENST00000253251 LCE2BO14633 110 aa5.31□□□□□ -1.56
UBE4B-201ENST00000253251 FLGP20930 4061 aaPredicted RBP5.31□□□□□ -1.56
UBE4B-201ENST00000253251 MT1GP13640 62 aa5.29□□□□□ -1.56
UBE4B-201ENST00000253251 SPRR2EP22531 72 aa5.29□□□□□ -1.56
UBE4B-201ENST00000253251 SPRR2BP35325 72 aa5.29□□□□□ -1.56
UBE4B-201ENST00000253251 SPRR2AP35326 72 aa5.29□□□□□ -1.56
UBE4B-201ENST00000253251 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
UBE4B-201ENST00000253251 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
UBE4B-201ENST00000253251 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.57
UBE4B-201ENST00000253251 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.57
UBE4B-201ENST00000253251 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
UBE4B-201ENST00000253251 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
UBE4B-201ENST00000253251 SPRR2DP22532 72 aa5.14□□□□□ -1.59
UBE4B-201ENST00000253251 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
UBE4B-201ENST00000253251 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
UBE4B-201ENST00000253251 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
UBE4B-201ENST00000253251 MT1EP04732 61 aa5.07□□□□□ -1.6
UBE4B-201ENST00000253251 MT1LQ93083 61 aa5.06□□□□□ -1.6
UBE4B-201ENST00000253251 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
UBE4B-201ENST00000253251 KRTAP12-4P60329 112 aa5□□□□□ -1.61
UBE4B-201ENST00000253251 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
UBE4B-201ENST00000253251 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms