RNA–Protein interactions for RNA: ENST00000252996.8

TAF4-201, Transcript of TATA-box binding protein associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TAF4, Length 4,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4-201ENST00000252996 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
TAF4-201ENST00000252996 VPS13DQ5THJ4 4388 aa9.16□□□□□ -0.94
TAF4-201ENST00000252996 STARD9Q9P2P6 4700 aa9.16□□□□□ -0.94
TAF4-201ENST00000252996 KRTAP15-1Q3LI76 137 aa9.13□□□□□ -0.95
TAF4-201ENST00000252996 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
TAF4-201ENST00000252996 FAT1Q14517 4588 aa9.05□□□□□ -0.96
TAF4-201ENST00000252996 KRTAP4-5Q9BYR2 181 aa9.04□□□□□ -0.96
TAF4-201ENST00000252996 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
TAF4-201ENST00000252996 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
TAF4-201ENST00000252996 ANK2Q01484 3957 aa8.97□□□□□ -0.97
TAF4-201ENST00000252996 DNAH8Q96JB1 4490 aa8.96□□□□□ -0.97
TAF4-201ENST00000252996 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
TAF4-201ENST00000252996 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
TAF4-201ENST00000252996 DYNC1H1Q14204 4646 aaKnown RBP8.92□□□□□ -0.98
TAF4-201ENST00000252996 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
TAF4-201ENST00000252996 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
TAF4-201ENST00000252996 LYSTQ99698 3801 aa8.78□□□□□ -1
TAF4-201ENST00000252996 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
TAF4-201ENST00000252996 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
TAF4-201ENST00000252996 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
TAF4-201ENST00000252996 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
TAF4-201ENST00000252996 RYR1P21817 5038 aa8.65□□□□□ -1.02
TAF4-201ENST00000252996 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.03
TAF4-201ENST00000252996 SACSQ9NZJ4 4579 aa8.63□□□□□ -1.03
TAF4-201ENST00000252996 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
TAF4-201ENST00000252996 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
TAF4-201ENST00000252996 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
TAF4-201ENST00000252996 KRTAP12-3P60328 96 aa8.6□□□□□ -1.03
TAF4-201ENST00000252996 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
TAF4-201ENST00000252996 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
TAF4-201ENST00000252996 FAT2Q9NYQ8 4349 aa8.54□□□□□ -1.04
TAF4-201ENST00000252996 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
TAF4-201ENST00000252996 DNAH6Q9C0G6 4158 aa8.54□□□□□ -1.04
TAF4-201ENST00000252996 INE1O15225 51 aa8.52□□□□□ -1.05
TAF4-201ENST00000252996 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
TAF4-201ENST00000252996 HECTD4Q9Y4D8 3996 aa8.47□□□□□ -1.05
TAF4-201ENST00000252996 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
TAF4-201ENST00000252996 LRP1Q07954 4544 aaKnown RBP8.43□□□□□ -1.06
TAF4-201ENST00000252996 KRTAP23-1A1A580 65 aa8.38□□□□□ -1.07
TAF4-201ENST00000252996 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
TAF4-201ENST00000252996 RYR3Q15413 4870 aa8.35□□□□□ -1.07
TAF4-201ENST00000252996 HYDINQ4G0P3 5121 aa8.29□□□□□ -1.08
TAF4-201ENST00000252996 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
TAF4-201ENST00000252996 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
TAF4-201ENST00000252996 RYR2Q92736 4967 aa8.07□□□□□ -1.12
TAF4-201ENST00000252996 LRP2P98164 4655 aa8.05□□□□□ -1.12
TAF4-201ENST00000252996 KRTAP10-5P60370 271 aa8□□□□□ -1.13
TAF4-201ENST00000252996 KRTAP8-1Q8IUC2 63 aa7.97□□□□□ -1.13
TAF4-201ENST00000252996 MT1HP80294 61 aa7.96□□□□□ -1.13
TAF4-201ENST00000252996 MT2AP02795 61 aa7.95□□□□□ -1.14
TAF4-201ENST00000252996 PKD1P98161 4303 aa7.89□□□□□ -1.15
TAF4-201ENST00000252996 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
TAF4-201ENST00000252996 HERC2O95714 4834 aa7.87□□□□□ -1.15
TAF4-201ENST00000252996 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
TAF4-201ENST00000252996 HSPG2P98160 4391 aa7.84□□□□□ -1.16
TAF4-201ENST00000252996 MT1FP04733 61 aa7.82□□□□□ -1.16
TAF4-201ENST00000252996 LPAP08519 4548 aa7.67□□□□□ -1.18
TAF4-201ENST00000252996 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
TAF4-201ENST00000252996 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
TAF4-201ENST00000252996 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
TAF4-201ENST00000252996 TNXBP22105 4242 aa7.48□□□□□ -1.21
TAF4-201ENST00000252996 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
TAF4-201ENST00000252996 SPRR2FQ96RM1 72 aa7.44□□□□□ -1.22
TAF4-201ENST00000252996 EPPK1P58107 5090 aaKnown RBP7.41□□□□□ -1.22
TAF4-201ENST00000252996 KRTAP10-7P60409 375 aaPredicted RBP7.4□□□□□ -1.22
TAF4-201ENST00000252996 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
TAF4-201ENST00000252996 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.23
TAF4-201ENST00000252996 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
TAF4-201ENST00000252996 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
TAF4-201ENST00000252996 HERC1Q15751 4861 aa7.36□□□□□ -1.23
TAF4-201ENST00000252996 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
TAF4-201ENST00000252996 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
TAF4-201ENST00000252996 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
TAF4-201ENST00000252996 MT1XP80297 61 aa7.28□□□□□ -1.24
TAF4-201ENST00000252996 MT1BP07438 61 aa7.27□□□□□ -1.25
TAF4-201ENST00000252996 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
TAF4-201ENST00000252996 SYNE1Q8NF91 8797 aaKnown RBP7.21□□□□□ -1.26
TAF4-201ENST00000252996 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
TAF4-201ENST00000252996 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
TAF4-201ENST00000252996 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
TAF4-201ENST00000252996 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
TAF4-201ENST00000252996 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
TAF4-201ENST00000252996 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
TAF4-201ENST00000252996 MUC2Q02817 5179 aa7□□□□□ -1.29
TAF4-201ENST00000252996 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
TAF4-201ENST00000252996 MT1GP13640 62 aa6.97□□□□□ -1.29
TAF4-201ENST00000252996 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
TAF4-201ENST00000252996 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
TAF4-201ENST00000252996 KRTAP12-4P60329 112 aa6.92□□□□□ -1.3
TAF4-201ENST00000252996 RNF213Q63HN8 5207 aa6.88□□□□□ -1.31
TAF4-201ENST00000252996 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
TAF4-201ENST00000252996 LCE2BO14633 110 aa6.82□□□□□ -1.32
TAF4-201ENST00000252996 SPRR2EP22531 72 aa6.81□□□□□ -1.32
TAF4-201ENST00000252996 SPRR2BP35325 72 aa6.81□□□□□ -1.32
TAF4-201ENST00000252996 SPRR2AP35326 72 aa6.81□□□□□ -1.32
TAF4-201ENST00000252996 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
TAF4-201ENST00000252996 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
TAF4-201ENST00000252996 LCE3DQ9BYE3 92 aa6.58□□□□□ -1.36
TAF4-201ENST00000252996 SPRR2DP22532 72 aa6.56□□□□□ -1.36
TAF4-201ENST00000252996 MT1LQ93083 61 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms