RNA–Protein interactions for RNA: ENST00000244769.8

ATXN1-201, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-201ENST00000244769 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.8
ATXN1-201ENST00000244769 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
ATXN1-201ENST00000244769 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
ATXN1-201ENST00000244769 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
ATXN1-201ENST00000244769 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
ATXN1-201ENST00000244769 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
ATXN1-201ENST00000244769 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
ATXN1-201ENST00000244769 ZNF469Q96JG9 3925 aaPredicted RBP3.7□□□□□ -1.82
ATXN1-201ENST00000244769 DNAH3Q8TD57 4116 aa3.65□□□□□ -1.82
ATXN1-201ENST00000244769 HECTD4Q9Y4D8 3996 aa3.65□□□□□ -1.83
ATXN1-201ENST00000244769 LYSTQ99698 3801 aa3.64□□□□□ -1.83
ATXN1-201ENST00000244769 KRTAP4-1Q9BYQ7 146 aa3.63□□□□□ -1.83
ATXN1-201ENST00000244769 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
ATXN1-201ENST00000244769 DNHD1Q96M86 4753 aa3.61□□□□□ -1.83
ATXN1-201ENST00000244769 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.83
ATXN1-201ENST00000244769 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.84
ATXN1-201ENST00000244769 DNAH7Q8WXX0 4024 aa3.57□□□□□ -1.84
ATXN1-201ENST00000244769 ANK2Q01484 3957 aa3.56□□□□□ -1.84
ATXN1-201ENST00000244769 CMYA5Q8N3K9 4069 aa3.54□□□□□ -1.84
ATXN1-201ENST00000244769 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
ATXN1-201ENST00000244769 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
ATXN1-201ENST00000244769 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
ATXN1-201ENST00000244769 DNAH11Q96DT5 4516 aa3.51□□□□□ -1.85
ATXN1-201ENST00000244769 MT1HP80294 61 aa3.5□□□□□ -1.85
ATXN1-201ENST00000244769 DNAH10Q8IVF4 4471 aa3.5□□□□□ -1.85
ATXN1-201ENST00000244769 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
ATXN1-201ENST00000244769 DNAH5Q8TE73 4624 aa3.47□□□□□ -1.85
ATXN1-201ENST00000244769 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
ATXN1-201ENST00000244769 FRAS1Q86XX4 4008 aa3.47□□□□□ -1.85
ATXN1-201ENST00000244769 RYR3Q15413 4870 aa3.44□□□□□ -1.86
ATXN1-201ENST00000244769 PLECQ15149 4684 aaKnown RBP3.44□□□□□ -1.86
ATXN1-201ENST00000244769 KMT2AQ03164 3969 aa3.44□□□□□ -1.86
ATXN1-201ENST00000244769 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
ATXN1-201ENST00000244769 DNAH17Q9UFH2 4485 aa3.43□□□□□ -1.86
ATXN1-201ENST00000244769 RYR1P21817 5038 aa3.42□□□□□ -1.86
ATXN1-201ENST00000244769 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
ATXN1-201ENST00000244769 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
ATXN1-201ENST00000244769 PRKDCP78527 4128 aaKnown RBP3.4□□□□□ -1.86
ATXN1-201ENST00000244769 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.86
ATXN1-201ENST00000244769 MT2AP02795 61 aa3.37□□□□□ -1.87
ATXN1-201ENST00000244769 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
ATXN1-201ENST00000244769 FAT2Q9NYQ8 4349 aa3.35□□□□□ -1.87
ATXN1-201ENST00000244769 SPRR2EP22531 72 aa3.34□□□□□ -1.88
ATXN1-201ENST00000244769 SPRR2BP35325 72 aa3.34□□□□□ -1.88
ATXN1-201ENST00000244769 SPRR2AP35326 72 aa3.34□□□□□ -1.88
ATXN1-201ENST00000244769 MT1FP04733 61 aa3.34□□□□□ -1.88
ATXN1-201ENST00000244769 DYNC2H1Q8NCM8 4307 aaKnown RBP3.32□□□□□ -1.88
ATXN1-201ENST00000244769 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
ATXN1-201ENST00000244769 LCE2BO14633 110 aa3.32□□□□□ -1.88
ATXN1-201ENST00000244769 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
ATXN1-201ENST00000244769 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
ATXN1-201ENST00000244769 SPRR2DP22532 72 aa3.27□□□□□ -1.89
ATXN1-201ENST00000244769 RYR2Q92736 4967 aa3.24□□□□□ -1.89
ATXN1-201ENST00000244769 DNAH8Q96JB1 4490 aa3.23□□□□□ -1.89
ATXN1-201ENST00000244769 SACSQ9NZJ4 4579 aa3.22□□□□□ -1.89
ATXN1-201ENST00000244769 MT1GP13640 62 aa3.22□□□□□ -1.89
ATXN1-201ENST00000244769 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.89
ATXN1-201ENST00000244769 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
ATXN1-201ENST00000244769 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
ATXN1-201ENST00000244769 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
ATXN1-201ENST00000244769 FAT1Q14517 4588 aa3.12□□□□□ -1.91
ATXN1-201ENST00000244769 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
ATXN1-201ENST00000244769 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
ATXN1-201ENST00000244769 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
ATXN1-201ENST00000244769 LCE2CQ5TA81 110 aa3.09□□□□□ -1.91
ATXN1-201ENST00000244769 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
ATXN1-201ENST00000244769 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
ATXN1-201ENST00000244769 MT1XP80297 61 aa3.08□□□□□ -1.92
ATXN1-201ENST00000244769 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
ATXN1-201ENST00000244769 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
ATXN1-201ENST00000244769 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
ATXN1-201ENST00000244769 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
ATXN1-201ENST00000244769 PKD1P98161 4303 aa3.03□□□□□ -1.92
ATXN1-201ENST00000244769 MT1BP07438 61 aa3.02□□□□□ -1.93
ATXN1-201ENST00000244769 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
ATXN1-201ENST00000244769 MT1LQ93083 61 aa3.01□□□□□ -1.93
ATXN1-201ENST00000244769 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
ATXN1-201ENST00000244769 HERC2O95714 4834 aa3.01□□□□□ -1.93
ATXN1-201ENST00000244769 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
ATXN1-201ENST00000244769 HERC1Q15751 4861 aa2.99□□□□□ -1.93
ATXN1-201ENST00000244769 KRTAP19-2Q3LHN2 52 aa2.99□□□□□ -1.93
ATXN1-201ENST00000244769 MT3P25713 68 aa2.98□□□□□ -1.93
ATXN1-201ENST00000244769 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
ATXN1-201ENST00000244769 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
ATXN1-201ENST00000244769 KRTAP9-8Q9BYQ0 159 aa2.96□□□□□ -1.94
ATXN1-201ENST00000244769 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
ATXN1-201ENST00000244769 KRTAP4-8Q9BYQ9 185 aa2.94□□□□□ -1.94
ATXN1-201ENST00000244769 KRTAP9-3Q9BYQ3 159 aa2.94□□□□□ -1.94
ATXN1-201ENST00000244769 HSPG2P98160 4391 aa2.92□□□□□ -1.94
ATXN1-201ENST00000244769 FAT3Q8TDW7 4589 aa2.92□□□□□ -1.94
ATXN1-201ENST00000244769 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
ATXN1-201ENST00000244769 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
ATXN1-201ENST00000244769 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.95
ATXN1-201ENST00000244769 LRP2P98164 4655 aa2.87□□□□□ -1.95
ATXN1-201ENST00000244769 MT1EP04732 61 aa2.84□□□□□ -1.95
ATXN1-201ENST00000244769 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
ATXN1-201ENST00000244769 TNXBP22105 4242 aa2.81□□□□□ -1.96
ATXN1-201ENST00000244769 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
ATXN1-201ENST00000244769 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
ATXN1-201ENST00000244769 MT1MQ8N339 61 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 294.9 ms