RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CUBNO60494 3623 aa3.09□□□□□ -1.91
MED28-201ENST00000237380 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
MED28-201ENST00000237380 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
MED28-201ENST00000237380 LORP23490 312 aaPredicted RBP3.06□□□□□ -1.92
MED28-201ENST00000237380 ANK3Q12955 4377 aaKnown RBP3.06□□□□□ -1.92
MED28-201ENST00000237380 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
MED28-201ENST00000237380 CMYA5Q8N3K9 4069 aa2.98□□□□□ -1.93
MED28-201ENST00000237380 CSMD2Q7Z408 3487 aa2.98□□□□□ -1.93
MED28-201ENST00000237380 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
MED28-201ENST00000237380 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
MED28-201ENST00000237380 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.94
MED28-201ENST00000237380 MT1HP80294 61 aa2.95□□□□□ -1.94
MED28-201ENST00000237380 DNAH6Q9C0G6 4158 aa2.94□□□□□ -1.94
MED28-201ENST00000237380 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
MED28-201ENST00000237380 CSMD3Q7Z407 3707 aa2.91□□□□□ -1.94
MED28-201ENST00000237380 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.95
MED28-201ENST00000237380 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
MED28-201ENST00000237380 SPRR2EP22531 72 aa2.89□□□□□ -1.95
MED28-201ENST00000237380 SPRR2BP35325 72 aa2.89□□□□□ -1.95
MED28-201ENST00000237380 SPRR2AP35326 72 aa2.89□□□□□ -1.95
MED28-201ENST00000237380 DNAH2Q9P225 4427 aa2.88□□□□□ -1.95
MED28-201ENST00000237380 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
MED28-201ENST00000237380 LCE2BO14633 110 aa2.84□□□□□ -1.96
MED28-201ENST00000237380 SPRR2DP22532 72 aa2.83□□□□□ -1.96
MED28-201ENST00000237380 MT2AP02795 61 aa2.83□□□□□ -1.96
MED28-201ENST00000237380 ANK2Q01484 3957 aa2.8□□□□□ -1.96
MED28-201ENST00000237380 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
MED28-201ENST00000237380 DNAH10Q8IVF4 4471 aa2.8□□□□□ -1.96
MED28-201ENST00000237380 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
MED28-201ENST00000237380 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
MED28-201ENST00000237380 LYSTQ99698 3801 aa2.77□□□□□ -1.97
MED28-201ENST00000237380 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
MED28-201ENST00000237380 VPS13BQ7Z7G8 4022 aa2.74□□□□□ -1.97
MED28-201ENST00000237380 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
MED28-201ENST00000237380 DYNC2H1Q8NCM8 4307 aaKnown RBP2.72□□□□□ -1.97
MED28-201ENST00000237380 MT3P25713 68 aa2.71□□□□□ -1.98
MED28-201ENST00000237380 PRKDCP78527 4128 aaKnown RBP2.7□□□□□ -1.98
MED28-201ENST00000237380 MT1FP04733 61 aa2.7□□□□□ -1.98
MED28-201ENST00000237380 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
MED28-201ENST00000237380 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
MED28-201ENST00000237380 DNAH11Q96DT5 4516 aa2.7□□□□□ -1.98
MED28-201ENST00000237380 MT1GP13640 62 aa2.68□□□□□ -1.98
MED28-201ENST00000237380 LCE2CQ5TA81 110 aa2.66□□□□□ -1.98
MED28-201ENST00000237380 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
MED28-201ENST00000237380 DNAH5Q8TE73 4624 aa2.66□□□□□ -1.98
MED28-201ENST00000237380 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.99
MED28-201ENST00000237380 RYR1P21817 5038 aa2.64□□□□□ -1.99
MED28-201ENST00000237380 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
MED28-201ENST00000237380 VPS13DQ5THJ4 4388 aa2.63□□□□□ -1.99
MED28-201ENST00000237380 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
MED28-201ENST00000237380 SACSQ9NZJ4 4579 aa2.6□□□□□ -1.99
MED28-201ENST00000237380 LCE2DQ5TA82 110 aaPredicted RBP2.59□□□□□ -2
MED28-201ENST00000237380 LCE3BQ5TA77 95 aa2.58□□□□□ -2
MED28-201ENST00000237380 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
MED28-201ENST00000237380 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
MED28-201ENST00000237380 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
MED28-201ENST00000237380 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
MED28-201ENST00000237380 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
MED28-201ENST00000237380 KRTAP19-1Q8IUB9 90 aa2.54□□□□□ -2
MED28-201ENST00000237380 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
MED28-201ENST00000237380 PLECQ15149 4684 aaKnown RBP2.53□□□□□ -2
MED28-201ENST00000237380 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
MED28-201ENST00000237380 DNHD1Q96M86 4753 aa2.51□□□□□ -2.01
MED28-201ENST00000237380 HERC1Q15751 4861 aa2.5□□□□□ -2.01
MED28-201ENST00000237380 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
MED28-201ENST00000237380 MT1LQ93083 61 aa2.5□□□□□ -2.01
MED28-201ENST00000237380 MT1XP80297 61 aa2.49□□□□□ -2.01
MED28-201ENST00000237380 LRP1BQ9NZR2 4599 aa2.48□□□□□ -2.01
MED28-201ENST00000237380 KRTAP9-8Q9BYQ0 159 aa2.45□□□□□ -2.02
MED28-201ENST00000237380 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
MED28-201ENST00000237380 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
MED28-201ENST00000237380 FAT3Q8TDW7 4589 aa2.43□□□□□ -2.02
MED28-201ENST00000237380 RYR2Q92736 4967 aa2.42□□□□□ -2.02
MED28-201ENST00000237380 APOBP04114 4563 aaKnown RBP2.42□□□□□ -2.02
MED28-201ENST00000237380 MYCBP2O75592 4640 aa2.42□□□□□ -2.02
MED28-201ENST00000237380 RYR3Q15413 4870 aa2.42□□□□□ -2.02
MED28-201ENST00000237380 KRTAP9-3Q9BYQ3 159 aa2.41□□□□□ -2.02
MED28-201ENST00000237380 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
MED28-201ENST00000237380 MT1BP07438 61 aa2.41□□□□□ -2.02
MED28-201ENST00000237380 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
MED28-201ENST00000237380 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
MED28-201ENST00000237380 MT1EP04732 61 aa2.39□□□□□ -2.03
MED28-201ENST00000237380 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
MED28-201ENST00000237380 PKD1P98161 4303 aa2.38□□□□□ -2.03
MED28-201ENST00000237380 KRTAP9-6A0A140TA67 174 aa2.38□□□□□ -2.03
MED28-201ENST00000237380 FAT1Q14517 4588 aa2.36□□□□□ -2.03
MED28-201ENST00000237380 MT4P47944 62 aa2.35□□□□□ -2.03
MED28-201ENST00000237380 MT1MQ8N339 61 aa2.35□□□□□ -2.03
MED28-201ENST00000237380 HYDINQ4G0P3 5121 aa2.34□□□□□ -2.03
MED28-201ENST00000237380 HSPG2P98160 4391 aa2.34□□□□□ -2.04
MED28-201ENST00000237380 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
MED28-201ENST00000237380 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
MED28-201ENST00000237380 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
MED28-201ENST00000237380 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
MED28-201ENST00000237380 KRTAP19-2Q3LHN2 52 aa2.29□□□□□ -2.04
MED28-201ENST00000237380 KRTAP17-1Q9BYP8 105 aa2.29□□□□□ -2.04
MED28-201ENST00000237380 TNXBP22105 4242 aa2.29□□□□□ -2.04
MED28-201ENST00000237380 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
MED28-201ENST00000237380 KRTAP4-8A0A0G2JLE6 195 aa2.27□□□□□ -2.05
MED28-201ENST00000237380 KRTAP4-8Q9BYQ9 185 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms