RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.66
GREB1-201ENST00000234142 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
GREB1-201ENST00000234142 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
GREB1-201ENST00000234142 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
GREB1-201ENST00000234142 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
GREB1-201ENST00000234142 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
GREB1-201ENST00000234142 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
GREB1-201ENST00000234142 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
GREB1-201ENST00000234142 ANK3Q12955 4377 aaKnown RBP4.54□□□□□ -1.68
GREB1-201ENST00000234142 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
GREB1-201ENST00000234142 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
GREB1-201ENST00000234142 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
GREB1-201ENST00000234142 MT1HP80294 61 aa4.44□□□□□ -1.7
GREB1-201ENST00000234142 DNAH2Q9P225 4427 aa4.44□□□□□ -1.7
GREB1-201ENST00000234142 ZNF469Q96JG9 3925 aaPredicted RBP4.37□□□□□ -1.71
GREB1-201ENST00000234142 MT2AP02795 61 aa4.37□□□□□ -1.71
GREB1-201ENST00000234142 CMYA5Q8N3K9 4069 aa4.34□□□□□ -1.71
GREB1-201ENST00000234142 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
GREB1-201ENST00000234142 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
GREB1-201ENST00000234142 MT3P25713 68 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 SPRR2EP22531 72 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 SPRR2BP35325 72 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 SPRR2AP35326 72 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 LYSTQ99698 3801 aa4.29□□□□□ -1.72
GREB1-201ENST00000234142 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
GREB1-201ENST00000234142 MT1FP04733 61 aa4.23□□□□□ -1.73
GREB1-201ENST00000234142 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
GREB1-201ENST00000234142 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
GREB1-201ENST00000234142 LCE2BO14633 110 aa4.19□□□□□ -1.74
GREB1-201ENST00000234142 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
GREB1-201ENST00000234142 SPRR2DP22532 72 aa4.18□□□□□ -1.74
GREB1-201ENST00000234142 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
GREB1-201ENST00000234142 ANK2Q01484 3957 aa4.13□□□□□ -1.75
GREB1-201ENST00000234142 KMT2AQ03164 3969 aa4.12□□□□□ -1.75
GREB1-201ENST00000234142 HECTD4Q9Y4D8 3996 aa4.08□□□□□ -1.76
GREB1-201ENST00000234142 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
GREB1-201ENST00000234142 MT1GP13640 62 aa4.07□□□□□ -1.76
GREB1-201ENST00000234142 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
GREB1-201ENST00000234142 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
GREB1-201ENST00000234142 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
GREB1-201ENST00000234142 DNAH17Q9UFH2 4485 aa4.06□□□□□ -1.76
GREB1-201ENST00000234142 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
GREB1-201ENST00000234142 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
GREB1-201ENST00000234142 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
GREB1-201ENST00000234142 MT1XP80297 61 aa3.95□□□□□ -1.78
GREB1-201ENST00000234142 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
GREB1-201ENST00000234142 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
GREB1-201ENST00000234142 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
GREB1-201ENST00000234142 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
GREB1-201ENST00000234142 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
GREB1-201ENST00000234142 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.78
GREB1-201ENST00000234142 PLECQ15149 4684 aaKnown RBP3.9□□□□□ -1.78
GREB1-201ENST00000234142 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
GREB1-201ENST00000234142 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
GREB1-201ENST00000234142 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
GREB1-201ENST00000234142 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
GREB1-201ENST00000234142 MT1LQ93083 61 aa3.84□□□□□ -1.8
GREB1-201ENST00000234142 STARD9Q9P2P6 4700 aa3.81□□□□□ -1.8
GREB1-201ENST00000234142 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
GREB1-201ENST00000234142 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
GREB1-201ENST00000234142 FAT1Q14517 4588 aa3.79□□□□□ -1.8
GREB1-201ENST00000234142 MT1BP07438 61 aa3.77□□□□□ -1.81
GREB1-201ENST00000234142 PRM1P04553 51 aa3.74□□□□□ -1.81
GREB1-201ENST00000234142 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
GREB1-201ENST00000234142 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
GREB1-201ENST00000234142 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
GREB1-201ENST00000234142 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
GREB1-201ENST00000234142 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.83
GREB1-201ENST00000234142 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
GREB1-201ENST00000234142 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
GREB1-201ENST00000234142 MT4P47944 62 aa3.64□□□□□ -1.83
GREB1-201ENST00000234142 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
GREB1-201ENST00000234142 MT1EP04732 61 aa3.62□□□□□ -1.83
GREB1-201ENST00000234142 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
GREB1-201ENST00000234142 DYNC1H1Q14204 4646 aaKnown RBP3.62□□□□□ -1.83
GREB1-201ENST00000234142 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
GREB1-201ENST00000234142 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
GREB1-201ENST00000234142 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
GREB1-201ENST00000234142 MT1MQ8N339 61 aa3.55□□□□□ -1.84
GREB1-201ENST00000234142 PKD1P98161 4303 aa3.54□□□□□ -1.84
GREB1-201ENST00000234142 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
GREB1-201ENST00000234142 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
GREB1-201ENST00000234142 RYR2Q92736 4967 aa3.47□□□□□ -1.85
GREB1-201ENST00000234142 HSPG2P98160 4391 aa3.44□□□□□ -1.86
GREB1-201ENST00000234142 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
GREB1-201ENST00000234142 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
GREB1-201ENST00000234142 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
GREB1-201ENST00000234142 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
GREB1-201ENST00000234142 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
GREB1-201ENST00000234142 MT1AP04731 61 aa3.37□□□□□ -1.87
GREB1-201ENST00000234142 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
GREB1-201ENST00000234142 TNXBP22105 4242 aa3.35□□□□□ -1.87
GREB1-201ENST00000234142 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
GREB1-201ENST00000234142 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
GREB1-201ENST00000234142 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
GREB1-201ENST00000234142 RYR1P21817 5038 aa3.33□□□□□ -1.88
GREB1-201ENST00000234142 RYR3Q15413 4870 aa3.31□□□□□ -1.88
GREB1-201ENST00000234142 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms