RNA–Protein interactions for RNA: ENST00000224140.5

SETX-201, Transcript of senataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SETX, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-201ENST00000224140 LYSTQ99698 3801 aa3.06□□□□□ -1.92
SETX-201ENST00000224140 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
SETX-201ENST00000224140 KRTAP3-1Q9BYR8 98 aa3.05□□□□□ -1.92
SETX-201ENST00000224140 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
SETX-201ENST00000224140 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
SETX-201ENST00000224140 MT1HL1P0DM35 61 aa3.03□□□□□ -1.92
SETX-201ENST00000224140 INE1O15225 51 aa3.03□□□□□ -1.92
SETX-201ENST00000224140 PLECQ15149 4684 aaKnown RBP3.03□□□□□ -1.93
SETX-201ENST00000224140 DNAH2Q9P225 4427 aa3.02□□□□□ -1.93
SETX-201ENST00000224140 DNAH17Q9UFH2 4485 aa3.01□□□□□ -1.93
SETX-201ENST00000224140 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
SETX-201ENST00000224140 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
SETX-201ENST00000224140 DNAH10Q8IVF4 4471 aa2.99□□□□□ -1.93
SETX-201ENST00000224140 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
SETX-201ENST00000224140 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
SETX-201ENST00000224140 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
SETX-201ENST00000224140 STARD9Q9P2P6 4700 aa2.95□□□□□ -1.94
SETX-201ENST00000224140 KRTAP3-3Q9BYR6 98 aa2.93□□□□□ -1.94
SETX-201ENST00000224140 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.94
SETX-201ENST00000224140 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.95
SETX-201ENST00000224140 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
SETX-201ENST00000224140 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
SETX-201ENST00000224140 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
SETX-201ENST00000224140 LRP1BQ9NZR2 4599 aa2.87□□□□□ -1.95
SETX-201ENST00000224140 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
SETX-201ENST00000224140 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
SETX-201ENST00000224140 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
SETX-201ENST00000224140 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
SETX-201ENST00000224140 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
SETX-201ENST00000224140 PKD1P98161 4303 aa2.73□□□□□ -1.97
SETX-201ENST00000224140 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
SETX-201ENST00000224140 TNXBP22105 4242 aa2.69□□□□□ -1.98
SETX-201ENST00000224140 DYNC1H1Q14204 4646 aaKnown RBP2.68□□□□□ -1.98
SETX-201ENST00000224140 FAT1Q14517 4588 aa2.68□□□□□ -1.98
SETX-201ENST00000224140 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
SETX-201ENST00000224140 HSPG2P98160 4391 aa2.67□□□□□ -1.98
SETX-201ENST00000224140 KRTAP4-5Q9BYR2 181 aa2.67□□□□□ -1.98
SETX-201ENST00000224140 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
SETX-201ENST00000224140 MT1HP80294 61 aa2.62□□□□□ -1.99
SETX-201ENST00000224140 FAT3Q8TDW7 4589 aa2.6□□□□□ -1.99
SETX-201ENST00000224140 LCE3AQ5TA76 89 aa2.56□□□□□ -2
SETX-201ENST00000224140 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
SETX-201ENST00000224140 DNHD1Q96M86 4753 aa2.56□□□□□ -2
SETX-201ENST00000224140 KRTAP10-5P60370 271 aa2.55□□□□□ -2
SETX-201ENST00000224140 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
SETX-201ENST00000224140 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
SETX-201ENST00000224140 MT2AP02795 61 aa2.53□□□□□ -2
SETX-201ENST00000224140 KRTAP4-1Q9BYQ7 146 aa2.52□□□□□ -2.01
SETX-201ENST00000224140 LORP23490 312 aaPredicted RBP2.52□□□□□ -2.01
SETX-201ENST00000224140 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
SETX-201ENST00000224140 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
SETX-201ENST00000224140 RYR3Q15413 4870 aa2.46□□□□□ -2.02
SETX-201ENST00000224140 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
SETX-201ENST00000224140 HYDINQ4G0P3 5121 aa2.45□□□□□ -2.02
SETX-201ENST00000224140 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
SETX-201ENST00000224140 MT1FP04733 61 aa2.43□□□□□ -2.02
SETX-201ENST00000224140 LRP2P98164 4655 aa2.42□□□□□ -2.02
SETX-201ENST00000224140 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
SETX-201ENST00000224140 RYR2Q92736 4967 aa2.41□□□□□ -2.02
SETX-201ENST00000224140 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
SETX-201ENST00000224140 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
SETX-201ENST00000224140 SPRR5A0A1B0GTR4 108 aa2.37□□□□□ -2.03
SETX-201ENST00000224140 RYR1P21817 5038 aa2.37□□□□□ -2.03
SETX-201ENST00000224140 LPAP08519 4548 aa2.37□□□□□ -2.03
SETX-201ENST00000224140 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
SETX-201ENST00000224140 LCE2CQ5TA81 110 aa2.34□□□□□ -2.03
SETX-201ENST00000224140 MT1XP80297 61 aa2.32□□□□□ -2.04
SETX-201ENST00000224140 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
SETX-201ENST00000224140 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
SETX-201ENST00000224140 MT1GP13640 62 aa2.31□□□□□ -2.04
SETX-201ENST00000224140 KRTAP9-3Q9BYQ3 159 aa2.31□□□□□ -2.04
SETX-201ENST00000224140 MT1BP07438 61 aa2.3□□□□□ -2.04
SETX-201ENST00000224140 HERC2O95714 4834 aa2.28□□□□□ -2.04
SETX-201ENST00000224140 KRTAP17-1Q9BYP8 105 aa2.25□□□□□ -2.05
SETX-201ENST00000224140 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SETX-201ENST00000224140 MT1LQ93083 61 aa2.24□□□□□ -2.05
SETX-201ENST00000224140 MT3P25713 68 aa2.24□□□□□ -2.05
SETX-201ENST00000224140 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
SETX-201ENST00000224140 LCE2DQ5TA82 110 aaPredicted RBP2.21□□□□□ -2.06
SETX-201ENST00000224140 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
SETX-201ENST00000224140 MT1EP04732 61 aa2.19□□□□□ -2.06
SETX-201ENST00000224140 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
SETX-201ENST00000224140 LCE2BO14633 110 aa2.17□□□□□ -2.06
SETX-201ENST00000224140 LCE2AQ5TA79 106 aaPredicted RBP2.17□□□□□ -2.06
SETX-201ENST00000224140 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
SETX-201ENST00000224140 BIRC6Q9NR09 4857 aa2.14□□□□□ -2.07
SETX-201ENST00000224140 SPRR2EP22531 72 aa2.13□□□□□ -2.07
SETX-201ENST00000224140 SPRR2BP35325 72 aa2.13□□□□□ -2.07
SETX-201ENST00000224140 SPRR2AP35326 72 aa2.13□□□□□ -2.07
SETX-201ENST00000224140 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
SETX-201ENST00000224140 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
SETX-201ENST00000224140 HERC1Q15751 4861 aa2.1□□□□□ -2.07
SETX-201ENST00000224140 SPRR2DP22532 72 aa2.09□□□□□ -2.08
SETX-201ENST00000224140 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
SETX-201ENST00000224140 MT1MQ8N339 61 aa2.08□□□□□ -2.08
SETX-201ENST00000224140 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
SETX-201ENST00000224140 KRTAP4-8A0A0G2JLE6 195 aa2.02□□□□□ -2.09
SETX-201ENST00000224140 KRTAP4-8Q9BYQ9 185 aa2.02□□□□□ -2.09
SETX-201ENST00000224140 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
SETX-201ENST00000224140 EPPK1P58107 5090 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms