RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
ITGB4-201ENST00000200181 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
ITGB4-201ENST00000200181 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
ITGB4-201ENST00000200181 MT1HP80294 61 aa6.58□□□□□ -1.36
ITGB4-201ENST00000200181 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
ITGB4-201ENST00000200181 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
ITGB4-201ENST00000200181 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
ITGB4-201ENST00000200181 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
ITGB4-201ENST00000200181 MT2AP02795 61 aa6.53□□□□□ -1.36
ITGB4-201ENST00000200181 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
ITGB4-201ENST00000200181 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
ITGB4-201ENST00000200181 AKAP9Q99996 3911 aa6.46□□□□□ -1.37
ITGB4-201ENST00000200181 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
ITGB4-201ENST00000200181 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
ITGB4-201ENST00000200181 MT1FP04733 61 aa6.37□□□□□ -1.39
ITGB4-201ENST00000200181 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
ITGB4-201ENST00000200181 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
ITGB4-201ENST00000200181 DNAH10Q8IVF4 4471 aa6.32□□□□□ -1.4
ITGB4-201ENST00000200181 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
ITGB4-201ENST00000200181 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
ITGB4-201ENST00000200181 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
ITGB4-201ENST00000200181 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
ITGB4-201ENST00000200181 DNAH8Q96JB1 4490 aa6.14□□□□□ -1.43
ITGB4-201ENST00000200181 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
ITGB4-201ENST00000200181 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
ITGB4-201ENST00000200181 SPRR2EP22531 72 aa6.12□□□□□ -1.43
ITGB4-201ENST00000200181 SPRR2BP35325 72 aa6.12□□□□□ -1.43
ITGB4-201ENST00000200181 SPRR2AP35326 72 aa6.12□□□□□ -1.43
ITGB4-201ENST00000200181 FAT1Q14517 4588 aa6.1□□□□□ -1.43
ITGB4-201ENST00000200181 DNAH9Q9NYC9 4486 aa6.1□□□□□ -1.43
ITGB4-201ENST00000200181 MT1GP13640 62 aa6.02□□□□□ -1.45
ITGB4-201ENST00000200181 DNAH17Q9UFH2 4485 aa6□□□□□ -1.45
ITGB4-201ENST00000200181 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
ITGB4-201ENST00000200181 SPRR2DP22532 72 aa5.92□□□□□ -1.46
ITGB4-201ENST00000200181 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
ITGB4-201ENST00000200181 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
ITGB4-201ENST00000200181 MT1XP80297 61 aa5.89□□□□□ -1.47
ITGB4-201ENST00000200181 LCE2BO14633 110 aa5.88□□□□□ -1.47
ITGB4-201ENST00000200181 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
ITGB4-201ENST00000200181 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
ITGB4-201ENST00000200181 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
ITGB4-201ENST00000200181 VPS13DQ5THJ4 4388 aa5.78□□□□□ -1.48
ITGB4-201ENST00000200181 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
ITGB4-201ENST00000200181 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
ITGB4-201ENST00000200181 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
ITGB4-201ENST00000200181 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
ITGB4-201ENST00000200181 ANK2Q01484 3957 aa5.75□□□□□ -1.49
ITGB4-201ENST00000200181 LYSTQ99698 3801 aa5.74□□□□□ -1.49
ITGB4-201ENST00000200181 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
ITGB4-201ENST00000200181 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
ITGB4-201ENST00000200181 MT1BP07438 61 aa5.73□□□□□ -1.49
ITGB4-201ENST00000200181 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
ITGB4-201ENST00000200181 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
ITGB4-201ENST00000200181 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
ITGB4-201ENST00000200181 APOBP04114 4563 aaKnown RBP5.69□□□□□ -1.5
ITGB4-201ENST00000200181 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
ITGB4-201ENST00000200181 RYR1P21817 5038 aa5.62□□□□□ -1.51
ITGB4-201ENST00000200181 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
ITGB4-201ENST00000200181 DNHD1Q96M86 4753 aa5.6□□□□□ -1.51
ITGB4-201ENST00000200181 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
ITGB4-201ENST00000200181 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
ITGB4-201ENST00000200181 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
ITGB4-201ENST00000200181 KMT2AQ03164 3969 aa5.55□□□□□ -1.52
ITGB4-201ENST00000200181 DNAH7Q8WXX0 4024 aa5.53□□□□□ -1.52
ITGB4-201ENST00000200181 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
ITGB4-201ENST00000200181 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
ITGB4-201ENST00000200181 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
ITGB4-201ENST00000200181 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
ITGB4-201ENST00000200181 PRM1P04553 51 aa5.48□□□□□ -1.53
ITGB4-201ENST00000200181 HERC1Q15751 4861 aa5.47□□□□□ -1.53
ITGB4-201ENST00000200181 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
ITGB4-201ENST00000200181 MT1LQ93083 61 aa5.46□□□□□ -1.54
ITGB4-201ENST00000200181 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
ITGB4-201ENST00000200181 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
ITGB4-201ENST00000200181 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
ITGB4-201ENST00000200181 RYR3Q15413 4870 aa5.37□□□□□ -1.55
ITGB4-201ENST00000200181 MT3P25713 68 aa5.36□□□□□ -1.55
ITGB4-201ENST00000200181 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
ITGB4-201ENST00000200181 MT1EP04732 61 aa5.35□□□□□ -1.55
ITGB4-201ENST00000200181 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
ITGB4-201ENST00000200181 HSPG2P98160 4391 aa5.3□□□□□ -1.56
ITGB4-201ENST00000200181 MT4P47944 62 aa5.25□□□□□ -1.57
ITGB4-201ENST00000200181 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
ITGB4-201ENST00000200181 MT1MQ8N339 61 aa5.22□□□□□ -1.57
ITGB4-201ENST00000200181 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
ITGB4-201ENST00000200181 PKD1P98161 4303 aa5.19□□□□□ -1.58
ITGB4-201ENST00000200181 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
ITGB4-201ENST00000200181 RYR2Q92736 4967 aa5.08□□□□□ -1.6
ITGB4-201ENST00000200181 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
ITGB4-201ENST00000200181 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
ITGB4-201ENST00000200181 HYDINQ4G0P3 5121 aa5.05□□□□□ -1.6
ITGB4-201ENST00000200181 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
ITGB4-201ENST00000200181 PKHD1L1Q86WI1 4243 aa5.02□□□□□ -1.61
ITGB4-201ENST00000200181 PKHD1P08F94 4074 aa5□□□□□ -1.61
ITGB4-201ENST00000200181 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.61
ITGB4-201ENST00000200181 HERC2O95714 4834 aa4.93□□□□□ -1.62
ITGB4-201ENST00000200181 MT1AP04731 61 aa4.93□□□□□ -1.62
ITGB4-201ENST00000200181 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
ITGB4-201ENST00000200181 LPAP08519 4548 aa4.9□□□□□ -1.62
ITGB4-201ENST00000200181 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms