RNA–Protein interactions for RNA: ENST00000160740.7

CIC-201, Transcript of capicua transcriptional repressor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CIC, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-201ENST00000160740 KRTAP8-1Q8IUC2 63 aa10.26□□□□□ -0.77
CIC-201ENST00000160740 BSNQ9UPA5 3926 aa10.02□□□□□ -0.81
CIC-201ENST00000160740 VPS13CQ709C8 3753 aa9.93□□□□□ -0.82
CIC-201ENST00000160740 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
CIC-201ENST00000160740 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
CIC-201ENST00000160740 MT1HP80294 61 aa9.81□□□□□ -0.84
CIC-201ENST00000160740 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.84
CIC-201ENST00000160740 DNAH5Q8TE73 4624 aa9.76□□□□□ -0.85
CIC-201ENST00000160740 DNAH10Q8IVF4 4471 aa9.74□□□□□ -0.85
CIC-201ENST00000160740 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
CIC-201ENST00000160740 MT2AP02795 61 aa9.68□□□□□ -0.86
CIC-201ENST00000160740 DNAH2Q9P225 4427 aa9.64□□□□□ -0.87
CIC-201ENST00000160740 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
CIC-201ENST00000160740 KRTAP19-5Q3LI72 72 aa9.57□□□□□ -0.88
CIC-201ENST00000160740 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
CIC-201ENST00000160740 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
CIC-201ENST00000160740 AKAP9Q99996 3911 aa9.5□□□□□ -0.89
CIC-201ENST00000160740 SPRR2FQ96RM1 72 aa9.49□□□□□ -0.89
CIC-201ENST00000160740 KRTAP10-7P60409 375 aaPredicted RBP9.49□□□□□ -0.89
CIC-201ENST00000160740 MT1FP04733 61 aa9.48□□□□□ -0.89
CIC-201ENST00000160740 LCE3CQ5T5A8 94 aa9.44□□□□□ -0.9
CIC-201ENST00000160740 DNAH17Q9UFH2 4485 aa9.35□□□□□ -0.91
CIC-201ENST00000160740 FAT1Q14517 4588 aa9.35□□□□□ -0.91
CIC-201ENST00000160740 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
CIC-201ENST00000160740 DNAH8Q96JB1 4490 aa9.28□□□□□ -0.92
CIC-201ENST00000160740 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
CIC-201ENST00000160740 LRP1BQ9NZR2 4599 aa9.15□□□□□ -0.95
CIC-201ENST00000160740 DNAH3Q8TD57 4116 aa9.14□□□□□ -0.95
CIC-201ENST00000160740 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
CIC-201ENST00000160740 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
CIC-201ENST00000160740 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
CIC-201ENST00000160740 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.97
CIC-201ENST00000160740 DNHD1Q96M86 4753 aa9.02□□□□□ -0.97
CIC-201ENST00000160740 KRTAP19-4Q3LI73 84 aa8.98□□□□□ -0.97
CIC-201ENST00000160740 ANK2Q01484 3957 aa8.94□□□□□ -0.98
CIC-201ENST00000160740 LCE3BQ5TA77 95 aa8.93□□□□□ -0.98
CIC-201ENST00000160740 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
CIC-201ENST00000160740 SPRR2EP22531 72 aa8.9□□□□□ -0.98
CIC-201ENST00000160740 SPRR2BP35325 72 aa8.9□□□□□ -0.98
CIC-201ENST00000160740 SPRR2AP35326 72 aa8.9□□□□□ -0.98
CIC-201ENST00000160740 RYR1P21817 5038 aa8.87□□□□□ -0.99
CIC-201ENST00000160740 APOBP04114 4563 aaKnown RBP8.85□□□□□ -0.99
CIC-201ENST00000160740 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
CIC-201ENST00000160740 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
CIC-201ENST00000160740 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
CIC-201ENST00000160740 MT1GP13640 62 aa8.76□□□□□ -1.01
CIC-201ENST00000160740 MT1XP80297 61 aa8.73□□□□□ -1.01
CIC-201ENST00000160740 KRTAP12-4P60329 112 aa8.7□□□□□ -1.02
CIC-201ENST00000160740 PRKDCP78527 4128 aaKnown RBP8.64□□□□□ -1.03
CIC-201ENST00000160740 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
CIC-201ENST00000160740 SPRR2DP22532 72 aa8.6□□□□□ -1.03
CIC-201ENST00000160740 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.03
CIC-201ENST00000160740 MT1BP07438 61 aa8.56□□□□□ -1.04
CIC-201ENST00000160740 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
CIC-201ENST00000160740 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
CIC-201ENST00000160740 LCE2BO14633 110 aa8.54□□□□□ -1.04
CIC-201ENST00000160740 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
CIC-201ENST00000160740 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
CIC-201ENST00000160740 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
CIC-201ENST00000160740 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
CIC-201ENST00000160740 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CIC-201ENST00000160740 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
CIC-201ENST00000160740 RYR3Q15413 4870 aa8.44□□□□□ -1.06
CIC-201ENST00000160740 LYSTQ99698 3801 aa8.43□□□□□ -1.06
CIC-201ENST00000160740 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
CIC-201ENST00000160740 LCE3DQ9BYE3 92 aa8.38□□□□□ -1.07
CIC-201ENST00000160740 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
CIC-201ENST00000160740 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
CIC-201ENST00000160740 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
CIC-201ENST00000160740 LCE3EQ5T5B0 92 aa8.23□□□□□ -1.09
CIC-201ENST00000160740 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
CIC-201ENST00000160740 KRTAP4-7Q9BYR0 210 aa8.1□□□□□ -1.11
CIC-201ENST00000160740 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
CIC-201ENST00000160740 HERC1Q15751 4861 aa8.09□□□□□ -1.11
CIC-201ENST00000160740 KRTAP19-3Q7Z4W3 81 aa8.06□□□□□ -1.12
CIC-201ENST00000160740 PKD1P98161 4303 aa8.02□□□□□ -1.13
CIC-201ENST00000160740 RYR2Q92736 4967 aa8.01□□□□□ -1.13
CIC-201ENST00000160740 HSPG2P98160 4391 aa8□□□□□ -1.13
CIC-201ENST00000160740 MT1LQ93083 61 aa7.98□□□□□ -1.13
CIC-201ENST00000160740 KIAA1109Q2LD37 5005 aa7.94□□□□□ -1.14
CIC-201ENST00000160740 MT1EP04732 61 aa7.89□□□□□ -1.15
CIC-201ENST00000160740 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
CIC-201ENST00000160740 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
CIC-201ENST00000160740 LPAP08519 4548 aa7.78□□□□□ -1.16
CIC-201ENST00000160740 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
CIC-201ENST00000160740 HERC2O95714 4834 aa7.72□□□□□ -1.17
CIC-201ENST00000160740 PRM1P04553 51 aa7.71□□□□□ -1.18
CIC-201ENST00000160740 LRP2P98164 4655 aa7.71□□□□□ -1.18
CIC-201ENST00000160740 MT4P47944 62 aa7.68□□□□□ -1.18
CIC-201ENST00000160740 MT1MQ8N339 61 aa7.68□□□□□ -1.18
CIC-201ENST00000160740 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
CIC-201ENST00000160740 MT3P25713 68 aa7.67□□□□□ -1.18
CIC-201ENST00000160740 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
CIC-201ENST00000160740 KRTAP19-2Q3LHN2 52 aa7.6□□□□□ -1.19
CIC-201ENST00000160740 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
CIC-201ENST00000160740 KRTAP4-3Q9BYR4 195 aa7.55□□□□□ -1.2
CIC-201ENST00000160740 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
CIC-201ENST00000160740 LCE1BQ5T7P3 118 aa7.5□□□□□ -1.21
CIC-201ENST00000160740 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
CIC-201ENST00000160740 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms