RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
MBD3-201ENST00000156825 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
MBD3-201ENST00000156825 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
MBD3-201ENST00000156825 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.1
MBD3-201ENST00000156825 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
MBD3-201ENST00000156825 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
MBD3-201ENST00000156825 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
MBD3-201ENST00000156825 LCE3AQ5TA76 89 aa8.05□□□□□ -1.12
MBD3-201ENST00000156825 FAT1Q14517 4588 aa8.01□□□□□ -1.13
MBD3-201ENST00000156825 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
MBD3-201ENST00000156825 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
MBD3-201ENST00000156825 RYR1P21817 5038 aa7.93□□□□□ -1.14
MBD3-201ENST00000156825 ANK2Q01484 3957 aa7.91□□□□□ -1.14
MBD3-201ENST00000156825 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
MBD3-201ENST00000156825 DYNC1H1Q14204 4646 aaKnown RBP7.86□□□□□ -1.15
MBD3-201ENST00000156825 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
MBD3-201ENST00000156825 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
MBD3-201ENST00000156825 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
MBD3-201ENST00000156825 CMYA5Q8N3K9 4069 aa7.76□□□□□ -1.17
MBD3-201ENST00000156825 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
MBD3-201ENST00000156825 DNAH2Q9P225 4427 aa7.72□□□□□ -1.17
MBD3-201ENST00000156825 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
MBD3-201ENST00000156825 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
MBD3-201ENST00000156825 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
MBD3-201ENST00000156825 MT1HP80294 61 aa7.7□□□□□ -1.18
MBD3-201ENST00000156825 INE1O15225 51 aa7.69□□□□□ -1.18
MBD3-201ENST00000156825 SACSQ9NZJ4 4579 aa7.68□□□□□ -1.18
MBD3-201ENST00000156825 LYSTQ99698 3801 aa7.67□□□□□ -1.18
MBD3-201ENST00000156825 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
MBD3-201ENST00000156825 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
MBD3-201ENST00000156825 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
MBD3-201ENST00000156825 MT2AP02795 61 aa7.61□□□□□ -1.19
MBD3-201ENST00000156825 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
MBD3-201ENST00000156825 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
MBD3-201ENST00000156825 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
MBD3-201ENST00000156825 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
MBD3-201ENST00000156825 MT1FP04733 61 aa7.5□□□□□ -1.21
MBD3-201ENST00000156825 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
MBD3-201ENST00000156825 DYNC2H1Q8NCM8 4307 aaKnown RBP7.45□□□□□ -1.22
MBD3-201ENST00000156825 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
MBD3-201ENST00000156825 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
MBD3-201ENST00000156825 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
MBD3-201ENST00000156825 RYR3Q15413 4870 aa7.4□□□□□ -1.22
MBD3-201ENST00000156825 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
MBD3-201ENST00000156825 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
MBD3-201ENST00000156825 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
MBD3-201ENST00000156825 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
MBD3-201ENST00000156825 SPRR2FQ96RM1 72 aa7.26□□□□□ -1.25
MBD3-201ENST00000156825 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
MBD3-201ENST00000156825 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
MBD3-201ENST00000156825 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.26
MBD3-201ENST00000156825 RYR2Q92736 4967 aa7.12□□□□□ -1.27
MBD3-201ENST00000156825 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
MBD3-201ENST00000156825 LRP2P98164 4655 aa7.06□□□□□ -1.28
MBD3-201ENST00000156825 HERC2O95714 4834 aa7.05□□□□□ -1.28
MBD3-201ENST00000156825 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
MBD3-201ENST00000156825 LCE3CQ5T5A8 94 aa7.02□□□□□ -1.29
MBD3-201ENST00000156825 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
MBD3-201ENST00000156825 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
MBD3-201ENST00000156825 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
MBD3-201ENST00000156825 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
MBD3-201ENST00000156825 PKD1P98161 4303 aa6.86□□□□□ -1.31
MBD3-201ENST00000156825 MT1XP80297 61 aa6.84□□□□□ -1.31
MBD3-201ENST00000156825 HSPG2P98160 4391 aa6.83□□□□□ -1.32
MBD3-201ENST00000156825 LPAP08519 4548 aa6.8□□□□□ -1.32
MBD3-201ENST00000156825 MT1BP07438 61 aa6.79□□□□□ -1.32
MBD3-201ENST00000156825 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
MBD3-201ENST00000156825 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
MBD3-201ENST00000156825 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
MBD3-201ENST00000156825 SPRR2EP22531 72 aa6.72□□□□□ -1.33
MBD3-201ENST00000156825 SPRR2BP35325 72 aa6.72□□□□□ -1.33
MBD3-201ENST00000156825 SPRR2AP35326 72 aa6.72□□□□□ -1.33
MBD3-201ENST00000156825 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
MBD3-201ENST00000156825 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
MBD3-201ENST00000156825 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
MBD3-201ENST00000156825 MT1GP13640 62 aa6.66□□□□□ -1.34
MBD3-201ENST00000156825 HERC1Q15751 4861 aa6.61□□□□□ -1.35
MBD3-201ENST00000156825 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
MBD3-201ENST00000156825 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
MBD3-201ENST00000156825 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
MBD3-201ENST00000156825 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
MBD3-201ENST00000156825 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
MBD3-201ENST00000156825 TNXBP22105 4242 aa6.47□□□□□ -1.37
MBD3-201ENST00000156825 SPRR2DP22532 72 aa6.46□□□□□ -1.37
MBD3-201ENST00000156825 LCE2BO14633 110 aa6.44□□□□□ -1.38
MBD3-201ENST00000156825 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
MBD3-201ENST00000156825 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
MBD3-201ENST00000156825 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
MBD3-201ENST00000156825 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
MBD3-201ENST00000156825 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
MBD3-201ENST00000156825 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
MBD3-201ENST00000156825 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
MBD3-201ENST00000156825 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
MBD3-201ENST00000156825 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
MBD3-201ENST00000156825 MT1LQ93083 61 aa6.17□□□□□ -1.42
MBD3-201ENST00000156825 LCE3DQ9BYE3 92 aa6.15□□□□□ -1.42
MBD3-201ENST00000156825 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
MBD3-201ENST00000156825 MT1EP04732 61 aa6.13□□□□□ -1.43
MBD3-201ENST00000156825 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
MBD3-201ENST00000156825 MUC2Q02817 5179 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms