RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
RB1CC1-201ENST00000025008 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
RB1CC1-201ENST00000025008 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
RB1CC1-201ENST00000025008 DNAH10Q8IVF4 4471 aa6.23□□□□□ -1.41
RB1CC1-201ENST00000025008 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
RB1CC1-201ENST00000025008 DMDP11532 3685 aa6.18□□□□□ -1.42
RB1CC1-201ENST00000025008 DNAH2Q9P225 4427 aa6.16□□□□□ -1.42
RB1CC1-201ENST00000025008 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
RB1CC1-201ENST00000025008 FAT1Q14517 4588 aa6.11□□□□□ -1.43
RB1CC1-201ENST00000025008 MT2AP02795 61 aa6.11□□□□□ -1.43
RB1CC1-201ENST00000025008 MT1HP80294 61 aa6.09□□□□□ -1.43
RB1CC1-201ENST00000025008 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
RB1CC1-201ENST00000025008 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
RB1CC1-201ENST00000025008 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
RB1CC1-201ENST00000025008 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
RB1CC1-201ENST00000025008 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
RB1CC1-201ENST00000025008 VPS13CQ709C8 3753 aa5.99□□□□□ -1.45
RB1CC1-201ENST00000025008 CSMD3Q7Z407 3707 aa5.99□□□□□ -1.45
RB1CC1-201ENST00000025008 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
RB1CC1-201ENST00000025008 MT1FP04733 61 aa5.96□□□□□ -1.46
RB1CC1-201ENST00000025008 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
RB1CC1-201ENST00000025008 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
RB1CC1-201ENST00000025008 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
RB1CC1-201ENST00000025008 BSNQ9UPA5 3926 aa5.9□□□□□ -1.46
RB1CC1-201ENST00000025008 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
RB1CC1-201ENST00000025008 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
RB1CC1-201ENST00000025008 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
RB1CC1-201ENST00000025008 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
RB1CC1-201ENST00000025008 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
RB1CC1-201ENST00000025008 LRP1BQ9NZR2 4599 aa5.75□□□□□ -1.49
RB1CC1-201ENST00000025008 RYR1P21817 5038 aa5.73□□□□□ -1.49
RB1CC1-201ENST00000025008 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
RB1CC1-201ENST00000025008 APOBP04114 4563 aaKnown RBP5.69□□□□□ -1.5
RB1CC1-201ENST00000025008 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
RB1CC1-201ENST00000025008 SPRR2EP22531 72 aa5.67□□□□□ -1.5
RB1CC1-201ENST00000025008 SPRR2BP35325 72 aa5.67□□□□□ -1.5
RB1CC1-201ENST00000025008 SPRR2AP35326 72 aa5.67□□□□□ -1.5
RB1CC1-201ENST00000025008 DYNC2H1Q8NCM8 4307 aaKnown RBP5.63□□□□□ -1.51
RB1CC1-201ENST00000025008 DNHD1Q96M86 4753 aa5.62□□□□□ -1.51
RB1CC1-201ENST00000025008 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
RB1CC1-201ENST00000025008 MT1XP80297 61 aa5.6□□□□□ -1.51
RB1CC1-201ENST00000025008 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
RB1CC1-201ENST00000025008 DNAH3Q8TD57 4116 aa5.57□□□□□ -1.52
RB1CC1-201ENST00000025008 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
RB1CC1-201ENST00000025008 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
RB1CC1-201ENST00000025008 FAT3Q8TDW7 4589 aa5.54□□□□□ -1.52
RB1CC1-201ENST00000025008 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
RB1CC1-201ENST00000025008 ZNF469Q96JG9 3925 aaPredicted RBP5.5□□□□□ -1.53
RB1CC1-201ENST00000025008 MT1BP07438 61 aa5.49□□□□□ -1.53
RB1CC1-201ENST00000025008 SPRR2DP22532 72 aa5.48□□□□□ -1.53
RB1CC1-201ENST00000025008 MT1GP13640 62 aa5.44□□□□□ -1.54
RB1CC1-201ENST00000025008 ANK2Q01484 3957 aa5.43□□□□□ -1.54
RB1CC1-201ENST00000025008 RYR3Q15413 4870 aa5.43□□□□□ -1.54
RB1CC1-201ENST00000025008 MYCBP2O75592 4640 aa5.42□□□□□ -1.54
RB1CC1-201ENST00000025008 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
RB1CC1-201ENST00000025008 LCE2BO14633 110 aa5.35□□□□□ -1.55
RB1CC1-201ENST00000025008 VPS13BQ7Z7G8 4022 aa5.35□□□□□ -1.55
RB1CC1-201ENST00000025008 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
RB1CC1-201ENST00000025008 HERC1Q15751 4861 aa5.32□□□□□ -1.56
RB1CC1-201ENST00000025008 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
RB1CC1-201ENST00000025008 RYR2Q92736 4967 aa5.31□□□□□ -1.56
RB1CC1-201ENST00000025008 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
RB1CC1-201ENST00000025008 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
RB1CC1-201ENST00000025008 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
RB1CC1-201ENST00000025008 CMYA5Q8N3K9 4069 aa5.27□□□□□ -1.57
RB1CC1-201ENST00000025008 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
RB1CC1-201ENST00000025008 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
RB1CC1-201ENST00000025008 PRKDCP78527 4128 aaKnown RBP5.22□□□□□ -1.57
RB1CC1-201ENST00000025008 HSPG2P98160 4391 aa5.21□□□□□ -1.58
RB1CC1-201ENST00000025008 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
RB1CC1-201ENST00000025008 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
RB1CC1-201ENST00000025008 KMT2AQ03164 3969 aa5.16□□□□□ -1.58
RB1CC1-201ENST00000025008 MT1LQ93083 61 aa5.15□□□□□ -1.58
RB1CC1-201ENST00000025008 DNAH7Q8WXX0 4024 aa5.14□□□□□ -1.59
RB1CC1-201ENST00000025008 LYSTQ99698 3801 aa5.14□□□□□ -1.59
RB1CC1-201ENST00000025008 PKD1P98161 4303 aa5.11□□□□□ -1.59
RB1CC1-201ENST00000025008 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
RB1CC1-201ENST00000025008 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
RB1CC1-201ENST00000025008 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
RB1CC1-201ENST00000025008 MT1EP04732 61 aa5.05□□□□□ -1.6
RB1CC1-201ENST00000025008 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
RB1CC1-201ENST00000025008 LRP2P98164 4655 aa5.01□□□□□ -1.61
RB1CC1-201ENST00000025008 HECTD4Q9Y4D8 3996 aa4.99□□□□□ -1.61
RB1CC1-201ENST00000025008 HERC2O95714 4834 aa4.98□□□□□ -1.61
RB1CC1-201ENST00000025008 MT4P47944 62 aa4.97□□□□□ -1.61
RB1CC1-201ENST00000025008 PCLOQ9Y6V0 5065 aa4.96□□□□□ -1.62
RB1CC1-201ENST00000025008 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
RB1CC1-201ENST00000025008 PRM1P04553 51 aa4.93□□□□□ -1.62
RB1CC1-201ENST00000025008 MT1MQ8N339 61 aa4.88□□□□□ -1.63
RB1CC1-201ENST00000025008 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
RB1CC1-201ENST00000025008 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
RB1CC1-201ENST00000025008 KMT2CQ8NEZ4 4911 aaKnown RBP4.87□□□□□ -1.63
RB1CC1-201ENST00000025008 MT3P25713 68 aa4.86□□□□□ -1.63
RB1CC1-201ENST00000025008 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
RB1CC1-201ENST00000025008 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
RB1CC1-201ENST00000025008 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
RB1CC1-201ENST00000025008 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
RB1CC1-201ENST00000025008 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
RB1CC1-201ENST00000025008 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
RB1CC1-201ENST00000025008 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms