RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
HS3ST1-201ENST00000002596 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
HS3ST1-201ENST00000002596 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
HS3ST1-201ENST00000002596 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
HS3ST1-201ENST00000002596 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
HS3ST1-201ENST00000002596 LYSTQ99698 3801 aa5.21□□□□□ -1.58
HS3ST1-201ENST00000002596 CMYA5Q8N3K9 4069 aa5.18□□□□□ -1.58
HS3ST1-201ENST00000002596 HUWE1Q7Z6Z7 4374 aaKnown RBP5.14□□□□□ -1.59
HS3ST1-201ENST00000002596 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
HS3ST1-201ENST00000002596 DNAH1Q9P2D7 4330 aa5.07□□□□□ -1.6
HS3ST1-201ENST00000002596 KRTAP10-4P60372 401 aaPredicted RBP5.05□□□□□ -1.6
HS3ST1-201ENST00000002596 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
HS3ST1-201ENST00000002596 RYR1P21817 5038 aa5.04□□□□□ -1.6
HS3ST1-201ENST00000002596 ANK2Q01484 3957 aa5.04□□□□□ -1.6
HS3ST1-201ENST00000002596 DNAH7Q8WXX0 4024 aa5.01□□□□□ -1.61
HS3ST1-201ENST00000002596 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
HS3ST1-201ENST00000002596 DNAH3Q8TD57 4116 aa4.97□□□□□ -1.61
HS3ST1-201ENST00000002596 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
HS3ST1-201ENST00000002596 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
HS3ST1-201ENST00000002596 LCE3BQ5TA77 95 aa4.84□□□□□ -1.64
HS3ST1-201ENST00000002596 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
HS3ST1-201ENST00000002596 DNAH10Q8IVF4 4471 aa4.83□□□□□ -1.64
HS3ST1-201ENST00000002596 MT1HP80294 61 aa4.75□□□□□ -1.65
HS3ST1-201ENST00000002596 SPRR2EP22531 72 aa4.74□□□□□ -1.65
HS3ST1-201ENST00000002596 SPRR2BP35325 72 aa4.74□□□□□ -1.65
HS3ST1-201ENST00000002596 SPRR2AP35326 72 aa4.74□□□□□ -1.65
HS3ST1-201ENST00000002596 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
HS3ST1-201ENST00000002596 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
HS3ST1-201ENST00000002596 DNAH6Q9C0G6 4158 aa4.72□□□□□ -1.65
HS3ST1-201ENST00000002596 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
HS3ST1-201ENST00000002596 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
HS3ST1-201ENST00000002596 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
HS3ST1-201ENST00000002596 DNAH9Q9NYC9 4486 aa4.63□□□□□ -1.67
HS3ST1-201ENST00000002596 MT2AP02795 61 aa4.6□□□□□ -1.67
HS3ST1-201ENST00000002596 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
HS3ST1-201ENST00000002596 SPRR2DP22532 72 aa4.57□□□□□ -1.68
HS3ST1-201ENST00000002596 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
HS3ST1-201ENST00000002596 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
HS3ST1-201ENST00000002596 DNAH8Q96JB1 4490 aa4.55□□□□□ -1.68
HS3ST1-201ENST00000002596 RYR2Q92736 4967 aa4.53□□□□□ -1.68
HS3ST1-201ENST00000002596 LCE2BO14633 110 aa4.49□□□□□ -1.69
HS3ST1-201ENST00000002596 MT1GP13640 62 aa4.49□□□□□ -1.69
HS3ST1-201ENST00000002596 MT1FP04733 61 aa4.47□□□□□ -1.69
HS3ST1-201ENST00000002596 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
HS3ST1-201ENST00000002596 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
HS3ST1-201ENST00000002596 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
HS3ST1-201ENST00000002596 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
HS3ST1-201ENST00000002596 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
HS3ST1-201ENST00000002596 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
HS3ST1-201ENST00000002596 STARD9Q9P2P6 4700 aa4.39□□□□□ -1.71
HS3ST1-201ENST00000002596 DNAH17Q9UFH2 4485 aa4.35□□□□□ -1.71
HS3ST1-201ENST00000002596 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
HS3ST1-201ENST00000002596 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
HS3ST1-201ENST00000002596 PKHD1P08F94 4074 aa4.32□□□□□ -1.72
HS3ST1-201ENST00000002596 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
HS3ST1-201ENST00000002596 MT4P47944 62 aa4.25□□□□□ -1.73
HS3ST1-201ENST00000002596 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
HS3ST1-201ENST00000002596 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
HS3ST1-201ENST00000002596 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
HS3ST1-201ENST00000002596 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
HS3ST1-201ENST00000002596 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
HS3ST1-201ENST00000002596 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
HS3ST1-201ENST00000002596 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
HS3ST1-201ENST00000002596 PKD1P98161 4303 aa4.14□□□□□ -1.75
HS3ST1-201ENST00000002596 HERC1Q15751 4861 aa4.13□□□□□ -1.75
HS3ST1-201ENST00000002596 PRM1P04553 51 aa4.13□□□□□ -1.75
HS3ST1-201ENST00000002596 PCLOQ9Y6V0 5065 aa4.13□□□□□ -1.75
HS3ST1-201ENST00000002596 MT3P25713 68 aa4.13□□□□□ -1.75
HS3ST1-201ENST00000002596 MT1XP80297 61 aa4.12□□□□□ -1.75
HS3ST1-201ENST00000002596 LRP1BQ9NZR2 4599 aa4.12□□□□□ -1.75
HS3ST1-201ENST00000002596 FAT1Q14517 4588 aa4.1□□□□□ -1.75
HS3ST1-201ENST00000002596 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
HS3ST1-201ENST00000002596 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
HS3ST1-201ENST00000002596 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
HS3ST1-201ENST00000002596 RYR3Q15413 4870 aa4.07□□□□□ -1.76
HS3ST1-201ENST00000002596 FAT3Q8TDW7 4589 aa4.04□□□□□ -1.76
HS3ST1-201ENST00000002596 KMT2CQ8NEZ4 4911 aaKnown RBP4.04□□□□□ -1.76
HS3ST1-201ENST00000002596 TNXBP22105 4242 aa4.03□□□□□ -1.76
HS3ST1-201ENST00000002596 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
HS3ST1-201ENST00000002596 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
HS3ST1-201ENST00000002596 HYDINQ4G0P3 5121 aa4.01□□□□□ -1.77
HS3ST1-201ENST00000002596 LPAP08519 4548 aa4□□□□□ -1.77
HS3ST1-201ENST00000002596 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
HS3ST1-201ENST00000002596 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
HS3ST1-201ENST00000002596 SACSQ9NZJ4 4579 aa3.96□□□□□ -1.78
HS3ST1-201ENST00000002596 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
HS3ST1-201ENST00000002596 MT1BP07438 61 aa3.94□□□□□ -1.78
HS3ST1-201ENST00000002596 MT1LQ93083 61 aa3.94□□□□□ -1.78
HS3ST1-201ENST00000002596 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
HS3ST1-201ENST00000002596 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
HS3ST1-201ENST00000002596 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
HS3ST1-201ENST00000002596 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
HS3ST1-201ENST00000002596 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
HS3ST1-201ENST00000002596 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
HS3ST1-201ENST00000002596 HSPG2P98160 4391 aa3.89□□□□□ -1.79
HS3ST1-201ENST00000002596 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
HS3ST1-201ENST00000002596 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
HS3ST1-201ENST00000002596 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
HS3ST1-201ENST00000002596 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
HS3ST1-201ENST00000002596 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms