RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 RTL8CO15255 209 aa9.41□□□□□ -0.9
LINC02228-204ENST00000642115 A0A087X002 238 aa9.4□□□□□ -0.9
LINC02228-204ENST00000642115 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
LINC02228-204ENST00000642115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
LINC02228-204ENST00000642115 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
LINC02228-204ENST00000642115 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
LINC02228-204ENST00000642115 Q5W150 140 aa9.36□□□□□ -0.91
LINC02228-204ENST00000642115 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
LINC02228-204ENST00000642115 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
LINC02228-204ENST00000642115 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
LINC02228-204ENST00000642115 APLNQ9ULZ1 77 aa9.34□□□□□ -0.91
LINC02228-204ENST00000642115 ACYP2P14621 99 aa9.33□□□□□ -0.92
LINC02228-204ENST00000642115 A0A1B0GU69 56 aa9.33□□□□□ -0.92
LINC02228-204ENST00000642115 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
LINC02228-204ENST00000642115 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
LINC02228-204ENST00000642115 RETNLBQ9BQ08 111 aa9.3□□□□□ -0.92
LINC02228-204ENST00000642115 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
LINC02228-204ENST00000642115 MIR22HGQ0VDD5 57 aa9.28□□□□□ -0.92
LINC02228-204ENST00000642115 ALMS1Q8TCU4 4167 aa9.28□□□□□ -0.92
LINC02228-204ENST00000642115 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.92
LINC02228-204ENST00000642115 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
LINC02228-204ENST00000642115 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
LINC02228-204ENST00000642115 CIRBP-AS1Q8TBR5 109 aa9.26□□□□□ -0.93
LINC02228-204ENST00000642115 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
LINC02228-204ENST00000642115 TGP01266 2768 aa9.24□□□□□ -0.93
LINC02228-204ENST00000642115 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
LINC02228-204ENST00000642115 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
LINC02228-204ENST00000642115 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
LINC02228-204ENST00000642115 UQCR11O14957 56 aa9.22□□□□□ -0.93
LINC02228-204ENST00000642115 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.94
LINC02228-204ENST00000642115 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
LINC02228-204ENST00000642115 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
LINC02228-204ENST00000642115 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
LINC02228-204ENST00000642115 ZNF861PO60384 105 aa9.16□□□□□ -0.94
LINC02228-204ENST00000642115 A0A087WTM6 91 aa9.15□□□□□ -0.94
LINC02228-204ENST00000642115 DNAH8Q96JB1 4490 aa9.15□□□□□ -0.94
LINC02228-204ENST00000642115 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
LINC02228-204ENST00000642115 DNHD1Q96M86 4753 aa9.09□□□□□ -0.95
LINC02228-204ENST00000642115 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
LINC02228-204ENST00000642115 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
LINC02228-204ENST00000642115 NUPR2A6NF83 97 aa9.06□□□□□ -0.96
LINC02228-204ENST00000642115 PRKDCP78527 4128 aaKnown RBP9.05□□□□□ -0.96
LINC02228-204ENST00000642115 KMT2AQ03164 3969 aa9.03□□□□□ -0.96
LINC02228-204ENST00000642115 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
LINC02228-204ENST00000642115 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.97
LINC02228-204ENST00000642115 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
LINC02228-204ENST00000642115 HECTD4Q9Y4D8 3996 aa9.01□□□□□ -0.97
LINC02228-204ENST00000642115 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
LINC02228-204ENST00000642115 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
LINC02228-204ENST00000642115 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
LINC02228-204ENST00000642115 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
LINC02228-204ENST00000642115 SPINK1P00995 79 aa8.94□□□□□ -0.98
LINC02228-204ENST00000642115 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
LINC02228-204ENST00000642115 ROMO1P60602 79 aa8.94□□□□□ -0.98
LINC02228-204ENST00000642115 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
LINC02228-204ENST00000642115 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
LINC02228-204ENST00000642115 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
LINC02228-204ENST00000642115 LY6G6CO95867 125 aa8.89□□□□□ -0.99
LINC02228-204ENST00000642115 DNAH6Q9C0G6 4158 aa8.88□□□□□ -0.99
LINC02228-204ENST00000642115 A8MUU9 505 aa8.88□□□□□ -0.99
LINC02228-204ENST00000642115 LINC00304Q8N9R0 145 aa8.86□□□□□ -0.99
LINC02228-204ENST00000642115 KRTAP13-2Q52LG2 175 aa8.85□□□□□ -0.99
LINC02228-204ENST00000642115 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
LINC02228-204ENST00000642115 DNAH11Q96DT5 4516 aa8.84□□□□□ -0.99
LINC02228-204ENST00000642115 H0YAA0 97 aa8.84□□□□□ -0.99
LINC02228-204ENST00000642115 KRTAP10-2P60368 255 aa8.83□□□□□ -1
LINC02228-204ENST00000642115 Q6ZSA8 131 aa8.83□□□□□ -1
LINC02228-204ENST00000642115 Q8N1X5 172 aa8.83□□□□□ -1
LINC02228-204ENST00000642115 CRIPTQ9P021 101 aa8.79□□□□□ -1
LINC02228-204ENST00000642115 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
LINC02228-204ENST00000642115 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
LINC02228-204ENST00000642115 P0C880 135 aa8.75□□□□□ -1.01
LINC02228-204ENST00000642115 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
LINC02228-204ENST00000642115 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
LINC02228-204ENST00000642115 DNAH5Q8TE73 4624 aa8.69□□□□□ -1.02
LINC02228-204ENST00000642115 A0A1B0GU33 70 aa8.66□□□□□ -1.02
LINC02228-204ENST00000642115 KRTAP1-4P0C5Y4 121 aa8.64□□□□□ -1.03
LINC02228-204ENST00000642115 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
LINC02228-204ENST00000642115 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
LINC02228-204ENST00000642115 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
LINC02228-204ENST00000642115 HYDINQ4G0P3 5121 aa8.57□□□□□ -1.04
LINC02228-204ENST00000642115 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
LINC02228-204ENST00000642115 FAT2Q9NYQ8 4349 aa8.5□□□□□ -1.05
LINC02228-204ENST00000642115 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
LINC02228-204ENST00000642115 K7ERS5 55 aa8.48□□□□□ -1.05
LINC02228-204ENST00000642115 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.05
LINC02228-204ENST00000642115 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
LINC02228-204ENST00000642115 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
LINC02228-204ENST00000642115 PKD1P98161 4303 aa8.41□□□□□ -1.06
LINC02228-204ENST00000642115 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
LINC02228-204ENST00000642115 NDUFAF8A1L188 74 aa8.39□□□□□ -1.07
LINC02228-204ENST00000642115 PKHD1P08F94 4074 aa8.38□□□□□ -1.07
LINC02228-204ENST00000642115 FAT1Q14517 4588 aa8.34□□□□□ -1.07
LINC02228-204ENST00000642115 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
LINC02228-204ENST00000642115 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
LINC02228-204ENST00000642115 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
LINC02228-204ENST00000642115 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
LINC02228-204ENST00000642115 A0A0D9SG42 100 aa8.26□□□□□ -1.09
LINC02228-204ENST00000642115 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
LINC02228-204ENST00000642115 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms