RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
PHGDH-222ENST00000641587 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
PHGDH-222ENST00000641587 NREPQ16612 68 aa5.55□□□□□ -1.52
PHGDH-222ENST00000641587 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
PHGDH-222ENST00000641587 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
PHGDH-222ENST00000641587 LINC00846Q9NV44 126 aa5.55□□□□□ -1.52
PHGDH-222ENST00000641587 Q5XG85 94 aa5.53□□□□□ -1.52
PHGDH-222ENST00000641587 Q6ZVQ6 151 aa5.53□□□□□ -1.52
PHGDH-222ENST00000641587 MT1HP80294 61 aa5.52□□□□□ -1.53
PHGDH-222ENST00000641587 XP32Q5T750 250 aa5.52□□□□□ -1.53
PHGDH-222ENST00000641587 SIGMAR1Q99720 223 aa5.52□□□□□ -1.53
PHGDH-222ENST00000641587 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
PHGDH-222ENST00000641587 IGKV4-1P06312 121 aa5.5□□□□□ -1.53
PHGDH-222ENST00000641587 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
PHGDH-222ENST00000641587 BPY2O14599 106 aa5.49□□□□□ -1.53
PHGDH-222ENST00000641587 Q96NJ1 140 aa5.49□□□□□ -1.53
PHGDH-222ENST00000641587 J3KT08 172 aa5.48□□□□□ -1.53
PHGDH-222ENST00000641587 LINC00472Q9H8W2 130 aa5.48□□□□□ -1.53
PHGDH-222ENST00000641587 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
PHGDH-222ENST00000641587 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
PHGDH-222ENST00000641587 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
PHGDH-222ENST00000641587 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
PHGDH-222ENST00000641587 PCOTHQ58A44 107 aa5.45□□□□□ -1.54
PHGDH-222ENST00000641587 ATP5EP2Q5VTU8 51 aa5.45□□□□□ -1.54
PHGDH-222ENST00000641587 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
PHGDH-222ENST00000641587 NDUFB1O75438 58 aa5.44□□□□□ -1.54
PHGDH-222ENST00000641587 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
PHGDH-222ENST00000641587 A8MWP4 228 aa5.43□□□□□ -1.54
PHGDH-222ENST00000641587 CXCL6P80162 114 aa5.43□□□□□ -1.54
PHGDH-222ENST00000641587 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
PHGDH-222ENST00000641587 DSCR10P59022 87 aa5.42□□□□□ -1.54
PHGDH-222ENST00000641587 Q8N9L7 120 aa5.42□□□□□ -1.54
PHGDH-222ENST00000641587 A0A1B0GVX0 72 aa5.41□□□□□ -1.54
PHGDH-222ENST00000641587 K7EQZ3 153 aa5.41□□□□□ -1.54
PHGDH-222ENST00000641587 HIST1H4AP62805 103 aaKnown RBP5.4□□□□□ -1.54
PHGDH-222ENST00000641587 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
PHGDH-222ENST00000641587 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
PHGDH-222ENST00000641587 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
PHGDH-222ENST00000641587 M0R2T5 61 aa5.37□□□□□ -1.55
PHGDH-222ENST00000641587 LINC00313P59037 77 aa5.37□□□□□ -1.55
PHGDH-222ENST00000641587 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
PHGDH-222ENST00000641587 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
PHGDH-222ENST00000641587 A0A087WVE0 104 aa5.34□□□□□ -1.55
PHGDH-222ENST00000641587 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.55
PHGDH-222ENST00000641587 HCG22E2RYF7 251 aa5.34□□□□□ -1.55
PHGDH-222ENST00000641587 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
PHGDH-222ENST00000641587 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
PHGDH-222ENST00000641587 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
PHGDH-222ENST00000641587 hDV103S1A0JD37 113 aa5.32□□□□□ -1.56
PHGDH-222ENST00000641587 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
PHGDH-222ENST00000641587 COX6B2Q6YFQ2 88 aa5.31□□□□□ -1.56
PHGDH-222ENST00000641587 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
PHGDH-222ENST00000641587 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
PHGDH-222ENST00000641587 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
PHGDH-222ENST00000641587 USH2AO75445 5202 aa5.29□□□□□ -1.56
PHGDH-222ENST00000641587 NDUFS5O43920 106 aa5.29□□□□□ -1.56
PHGDH-222ENST00000641587 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
PHGDH-222ENST00000641587 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
PHGDH-222ENST00000641587 RPL37P61927 97 aaKnown RBP5.28□□□□□ -1.56
PHGDH-222ENST00000641587 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
PHGDH-222ENST00000641587 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
PHGDH-222ENST00000641587 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
PHGDH-222ENST00000641587 A8MUU9 505 aa5.23□□□□□ -1.57
PHGDH-222ENST00000641587 Q75L30 129 aa5.23□□□□□ -1.57
PHGDH-222ENST00000641587 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
PHGDH-222ENST00000641587 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
PHGDH-222ENST00000641587 ATP11AUNQ6ZP68 121 aa5.2□□□□□ -1.58
PHGDH-222ENST00000641587 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
PHGDH-222ENST00000641587 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
PHGDH-222ENST00000641587 ATOX1O00244 68 aa5.18□□□□□ -1.58
PHGDH-222ENST00000641587 ZCCHC13Q8WW36 166 aaKnown RBP5.18□□□□□ -1.58
PHGDH-222ENST00000641587 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
PHGDH-222ENST00000641587 UQCRQO14949 82 aa5.16□□□□□ -1.58
PHGDH-222ENST00000641587 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
PHGDH-222ENST00000641587 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
PHGDH-222ENST00000641587 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
PHGDH-222ENST00000641587 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
PHGDH-222ENST00000641587 Q5W150 140 aa5.14□□□□□ -1.59
PHGDH-222ENST00000641587 H0Y9P7 68 aa5.13□□□□□ -1.59
PHGDH-222ENST00000641587 MP68P56378 58 aa5.12□□□□□ -1.59
PHGDH-222ENST00000641587 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
PHGDH-222ENST00000641587 IGKV2D-30A0A075B6S6 120 aa5.1□□□□□ -1.59
PHGDH-222ENST00000641587 IGKV2-30P06310 120 aa5.1□□□□□ -1.59
PHGDH-222ENST00000641587 C5orf47Q569G3 176 aa5.1□□□□□ -1.59
PHGDH-222ENST00000641587 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
PHGDH-222ENST00000641587 ANAPC13Q9BS18 74 aa5.1□□□□□ -1.59
PHGDH-222ENST00000641587 LCE2BO14633 110 aa5.09□□□□□ -1.59
PHGDH-222ENST00000641587 MT2AP02795 61 aa5.08□□□□□ -1.6
PHGDH-222ENST00000641587 LINC00208Q96KT6 92 aa5.08□□□□□ -1.6
PHGDH-222ENST00000641587 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
PHGDH-222ENST00000641587 C7orf65Q6ZTY9 151 aa5.07□□□□□ -1.6
PHGDH-222ENST00000641587 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
PHGDH-222ENST00000641587 SPINK7P58062 85 aa5.06□□□□□ -1.6
PHGDH-222ENST00000641587 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
PHGDH-222ENST00000641587 H3BPC8 53 aa5.05□□□□□ -1.6
PHGDH-222ENST00000641587 MT1FP04733 61 aa5.05□□□□□ -1.6
PHGDH-222ENST00000641587 COX7CP15954 63 aa5.04□□□□□ -1.6
PHGDH-222ENST00000641587 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
PHGDH-222ENST00000641587 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
PHGDH-222ENST00000641587 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms