RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
NECAP1-220ENST00000639841 S100ZQ8WXG8 99 aa3.85□□□□□ -1.79
NECAP1-220ENST00000639841 TEX49A0A1B0GTD5 131 aa3.85□□□□□ -1.79
NECAP1-220ENST00000639841 GVQW2A0A096LPI5 108 aaPredicted RBP3.84□□□□□ -1.79
NECAP1-220ENST00000639841 CTXND1A0A1B0GTU2 59 aa3.84□□□□□ -1.79
NECAP1-220ENST00000639841 IGLV6-57P01721 117 aa3.84□□□□□ -1.79
NECAP1-220ENST00000639841 APOC3P02656 99 aa3.83□□□□□ -1.8
NECAP1-220ENST00000639841 UBE2D1P51668 147 aa3.83□□□□□ -1.8
NECAP1-220ENST00000639841 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
NECAP1-220ENST00000639841 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
NECAP1-220ENST00000639841 TNXBP22105 4242 aa3.82□□□□□ -1.8
NECAP1-220ENST00000639841 SPCS1Q9Y6A9 102 aa3.82□□□□□ -1.8
NECAP1-220ENST00000639841 F2Z2F3 143 aa3.81□□□□□ -1.8
NECAP1-220ENST00000639841 COX6A2Q02221 97 aa3.81□□□□□ -1.8
NECAP1-220ENST00000639841 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 H3BRM9 83 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 H7BZZ5 65 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 ETDBQ3ZM63 59 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 Q5VV11 94 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 CLPSL2Q6UWE3 100 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 ST20Q9HBF5 79 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 NXT2Q9NPJ8 142 aaKnown RBP3.8□□□□□ -1.8
NECAP1-220ENST00000639841 MANBALQ9NQG1 85 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 HIGD1BQ9P298 99 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 CRIP1P50238 77 aa3.8□□□□□ -1.8
NECAP1-220ENST00000639841 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
NECAP1-220ENST00000639841 M0QY20 66 aa3.79□□□□□ -1.8
NECAP1-220ENST00000639841 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
NECAP1-220ENST00000639841 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 NDUFC1O43677 76 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 A0A096LNI7 61 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 MGPP08493 103 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 ADIRFQ15847 76 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 SMCO4Q9NRQ5 59 aa3.78□□□□□ -1.8
NECAP1-220ENST00000639841 UMAD1C9J7I0 102 aa3.77□□□□□ -1.81
NECAP1-220ENST00000639841 BAGE2Q86Y30 109 aa3.77□□□□□ -1.81
NECAP1-220ENST00000639841 TRAV23DV6A0A075B6W5 121 aa3.76□□□□□ -1.81
NECAP1-220ENST00000639841 A0A1W2PPM0 123 aa3.76□□□□□ -1.81
NECAP1-220ENST00000639841 IGLC3P0DOY3 106 aa3.76□□□□□ -1.81
NECAP1-220ENST00000639841 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
NECAP1-220ENST00000639841 LRP2P98164 4655 aa3.76□□□□□ -1.81
NECAP1-220ENST00000639841 PDE6GP18545 87 aa3.75□□□□□ -1.81
NECAP1-220ENST00000639841 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
NECAP1-220ENST00000639841 BVES-AS1Q5T3Y7 98 aa3.74□□□□□ -1.81
NECAP1-220ENST00000639841 CNFNQ9BYD5 112 aa3.74□□□□□ -1.81
NECAP1-220ENST00000639841 PRO1854Q9UHT4 67 aa3.74□□□□□ -1.81
NECAP1-220ENST00000639841 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
NECAP1-220ENST00000639841 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
NECAP1-220ENST00000639841 I3L3M4 83 aa3.73□□□□□ -1.81
NECAP1-220ENST00000639841 PPP1R17O96001 155 aa3.73□□□□□ -1.81
NECAP1-220ENST00000639841 SFTA2Q6UW10 78 aa3.73□□□□□ -1.81
NECAP1-220ENST00000639841 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
NECAP1-220ENST00000639841 JMJD7-PLA2G4BH0Y9G9 81 aa3.72□□□□□ -1.81
NECAP1-220ENST00000639841 CHKB-CPT1BH3BT56 60 aa3.72□□□□□ -1.81
NECAP1-220ENST00000639841 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
NECAP1-220ENST00000639841 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
NECAP1-220ENST00000639841 C20orf197Q8N268 126 aa3.71□□□□□ -1.82
NECAP1-220ENST00000639841 FXYD6-FXYD2A0A087WZ82 144 aa3.71□□□□□ -1.82
NECAP1-220ENST00000639841 C7orf77A4D0Y5 90 aa3.7□□□□□ -1.82
NECAP1-220ENST00000639841 NDUFA1O15239 70 aa3.7□□□□□ -1.82
NECAP1-220ENST00000639841 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
NECAP1-220ENST00000639841 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
NECAP1-220ENST00000639841 SPAG11BQ08648 103 aa3.69□□□□□ -1.82
NECAP1-220ENST00000639841 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
NECAP1-220ENST00000639841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
NECAP1-220ENST00000639841 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
NECAP1-220ENST00000639841 HIGD1CA8MV81 97 aa3.68□□□□□ -1.82
NECAP1-220ENST00000639841 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
NECAP1-220ENST00000639841 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 TRBV30A0A0K0K1B3 111 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 KANTRA0A1W2PQU2 76 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 FCER1GP30273 86 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 PMCHL1Q16048 86 aa3.67□□□□□ -1.82
NECAP1-220ENST00000639841 H3BUT2 72 aa3.66□□□□□ -1.82
NECAP1-220ENST00000639841 GNG13Q9P2W3 67 aa3.65□□□□□ -1.82
NECAP1-220ENST00000639841 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
NECAP1-220ENST00000639841 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
NECAP1-220ENST00000639841 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
NECAP1-220ENST00000639841 COA5Q86WW8 74 aa3.64□□□□□ -1.83
NECAP1-220ENST00000639841 RPL39LQ96EH5 51 aaKnown RBP3.64□□□□□ -1.83
NECAP1-220ENST00000639841 A0A1B0GUT8 65 aa3.63□□□□□ -1.83
NECAP1-220ENST00000639841 DNAL4O96015 105 aa3.63□□□□□ -1.83
NECAP1-220ENST00000639841 UBE2D4Q9Y2X8 147 aa3.63□□□□□ -1.83
NECAP1-220ENST00000639841 COX6CP09669 75 aa3.63□□□□□ -1.83
NECAP1-220ENST00000639841 ELOF1P60002 83 aaKnown RBP3.63□□□□□ -1.83
NECAP1-220ENST00000639841 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
NECAP1-220ENST00000639841 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
NECAP1-220ENST00000639841 BCE1O60756 84 aa3.62□□□□□ -1.83
NECAP1-220ENST00000639841 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
NECAP1-220ENST00000639841 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
NECAP1-220ENST00000639841 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
NECAP1-220ENST00000639841 SPATA45Q537H7 98 aa3.6□□□□□ -1.83
NECAP1-220ENST00000639841 C18orf32Q8TCD1 76 aa3.6□□□□□ -1.83
NECAP1-220ENST00000639841 C6orf48Q9UBA6 75 aa3.6□□□□□ -1.83
NECAP1-220ENST00000639841 INE1O15225 51 aa3.6□□□□□ -1.83
NECAP1-220ENST00000639841 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
NECAP1-220ENST00000639841 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
NECAP1-220ENST00000639841 Q8IZM0 81 aa3.58□□□□□ -1.84
NECAP1-220ENST00000639841 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms