RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	PPDPFL	Q8WWR9	84 aa		5.55	□□□□□ -1.52
PAX6-238	ENST00000638755	NAA38	Q9BRA0	125 aa	Known RBP	5.55	□□□□□ -1.52
PAX6-238	ENST00000638755		A0A1B0GX51	115 aa		5.54	□□□□□ -1.52
PAX6-238	ENST00000638755	SNCG	O76070	127 aa		5.54	□□□□□ -1.52
PAX6-238	ENST00000638755	FABP2	P12104	132 aa		5.54	□□□□□ -1.52
PAX6-238	ENST00000638755	NDUFV3	P56181	108 aa	Known RBP	5.54	□□□□□ -1.52
PAX6-238	ENST00000638755		A0A1B0GV72	72 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755	TSTD3	H0UI37	97 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755		M0R143	59 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755	COX6C	P09669	75 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755	DSCR10	P59022	87 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755		Q6JHZ5	121 aa		5.53	□□□□□ -1.52
PAX6-238	ENST00000638755	SCGB1C2	P0DMR2	95 aa		5.52	□□□□□ -1.53
PAX6-238	ENST00000638755	BATF	Q16520	125 aa		5.52	□□□□□ -1.53
PAX6-238	ENST00000638755		H3BMG7	143 aa		5.51	□□□□□ -1.53
PAX6-238	ENST00000638755	DNAL4	O96015	105 aa		5.51	□□□□□ -1.53
PAX6-238	ENST00000638755	ORMDL1	Q9P0S3	153 aa		5.51	□□□□□ -1.53
PAX6-238	ENST00000638755	TRAC	P01848	142 aa		5.48	□□□□□ -1.53
PAX6-238	ENST00000638755	LCE3B	Q5TA77	95 aa		5.48	□□□□□ -1.53
PAX6-238	ENST00000638755	KRTAP4-12	Q9BQ66	201 aa		5.48	□□□□□ -1.53
PAX6-238	ENST00000638755		A0A1W2PNM2	257 aa		5.47	□□□□□ -1.53
PAX6-238	ENST00000638755	GHRH	P01286	108 aa		5.46	□□□□□ -1.54
PAX6-238	ENST00000638755	TMEM256-PLSCR3	K7ERE1	68 aa		5.45	□□□□□ -1.54
PAX6-238	ENST00000638755	TEN1	Q86WV5	123 aa		5.45	□□□□□ -1.54
PAX6-238	ENST00000638755	KRTAP2-2	Q9BYT5	123 aa		5.45	□□□□□ -1.54
PAX6-238	ENST00000638755	KRTAP2-1	Q9BYU5	128 aa		5.45	□□□□□ -1.54
PAX6-238	ENST00000638755	GPR98	Q8WXG9	6306 aa		5.44	□□□□□ -1.54
PAX6-238	ENST00000638755		A0A087WSZ3	146 aa		5.44	□□□□□ -1.54
PAX6-238	ENST00000638755	BAALC-AS2	P0C853	105 aa		5.44	□□□□□ -1.54
PAX6-238	ENST00000638755	ANKRD29	Q8N6D5	301 aa		5.44	□□□□□ -1.54
PAX6-238	ENST00000638755	SS18L2	Q9UHA2	77 aa		5.44	□□□□□ -1.54
PAX6-238	ENST00000638755	TAX1BP3	O14907	124 aa		5.43	□□□□□ -1.54
PAX6-238	ENST00000638755	UBE2V1	Q13404	147 aa		5.43	□□□□□ -1.54
PAX6-238	ENST00000638755	PCP4L1	A6NKN8	68 aa		5.42	□□□□□ -1.54
PAX6-238	ENST00000638755		H3BQ85	93 aa		5.42	□□□□□ -1.54
PAX6-238	ENST00000638755	LINC00313	P59037	77 aa		5.42	□□□□□ -1.54
PAX6-238	ENST00000638755	ATXN8	Q156A1	80 aa		5.42	□□□□□ -1.54
PAX6-238	ENST00000638755	SPRR2E	P22531	72 aa		5.41	□□□□□ -1.54
PAX6-238	ENST00000638755	SPRR2B	P35325	72 aa		5.41	□□□□□ -1.54
PAX6-238	ENST00000638755	SPRR2A	P35326	72 aa		5.41	□□□□□ -1.54
PAX6-238	ENST00000638755	C9orf118	A6NHY6	69 aa		5.4	□□□□□ -1.54
PAX6-238	ENST00000638755	CCK	P06307	115 aa		5.4	□□□□□ -1.54
PAX6-238	ENST00000638755	SIGMAR1	Q99720	223 aa		5.4	□□□□□ -1.54
PAX6-238	ENST00000638755	TRBV7-4	A0A0J9YYF1	115 aa		5.39	□□□□□ -1.55
PAX6-238	ENST00000638755	RBM3	P98179	157 aa	Known RBP	5.39	□□□□□ -1.55
PAX6-238	ENST00000638755	VPS25	Q9BRG1	176 aa		5.39	□□□□□ -1.55
PAX6-238	ENST00000638755		A0A1W2PPM0	123 aa		5.38	□□□□□ -1.55
PAX6-238	ENST00000638755		C9JAW5	83 aa		5.38	□□□□□ -1.55
PAX6-238	ENST00000638755	MT1B	P07438	61 aa		5.37	□□□□□ -1.55
PAX6-238	ENST00000638755	SPINK7	P58062	85 aa		5.37	□□□□□ -1.55
PAX6-238	ENST00000638755	KRTAP10-5	P60370	271 aa		5.37	□□□□□ -1.55
PAX6-238	ENST00000638755	DEFB116	Q30KQ4	102 aa		5.37	□□□□□ -1.55
PAX6-238	ENST00000638755	LYRM7	Q5U5X0	104 aa		5.36	□□□□□ -1.55
PAX6-238	ENST00000638755	DSCR8	Q96T75	97 aa		5.36	□□□□□ -1.55
PAX6-238	ENST00000638755	SPRR2F	Q96RM1	72 aa		5.35	□□□□□ -1.55
PAX6-238	ENST00000638755	KRTAP9-9	Q9BYP9	154 aa		5.35	□□□□□ -1.55
PAX6-238	ENST00000638755	KRTAP9-4	Q9BYQ2	154 aa		5.35	□□□□□ -1.55
PAX6-238	ENST00000638755		Q5VV11	94 aa		5.34	□□□□□ -1.55
PAX6-238	ENST00000638755	IGKV4-1	P06312	121 aa		5.33	□□□□□ -1.56
PAX6-238	ENST00000638755		Q6ZQT0	140 aa		5.33	□□□□□ -1.56
PAX6-238	ENST00000638755	WFDC13	Q8IUB5	93 aa		5.33	□□□□□ -1.56
PAX6-238	ENST00000638755	LINC00472	Q9H8W2	130 aa		5.33	□□□□□ -1.56
PAX6-238	ENST00000638755	C14orf132	Q9NPU4	83 aa		5.33	□□□□□ -1.56
PAX6-238	ENST00000638755	COL5A1-AS1	Q5SY13	56 aa		5.32	□□□□□ -1.56
PAX6-238	ENST00000638755	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.31	□□□□□ -1.56
PAX6-238	ENST00000638755	SPCS1	Q9Y6A9	102 aa		5.31	□□□□□ -1.56
PAX6-238	ENST00000638755	LOC110117498	A0A087WWA1	95 aa		5.3	□□□□□ -1.56
PAX6-238	ENST00000638755	KRTAP4-8	A0A0G2JLE6	195 aa		5.3	□□□□□ -1.56
PAX6-238	ENST00000638755		H3BT86	120 aa		5.29	□□□□□ -1.56
PAX6-238	ENST00000638755	SVIP	Q8NHG7	77 aa		5.29	□□□□□ -1.56
PAX6-238	ENST00000638755	ZCCHC13	Q8WW36	166 aa	Known RBP	5.29	□□□□□ -1.56
PAX6-238	ENST00000638755	IGHV6-1	A0A0B4J1U7	121 aa		5.28	□□□□□ -1.56
PAX6-238	ENST00000638755		K7EP34	96 aa		5.25	□□□□□ -1.57
PAX6-238	ENST00000638755	PDE6G	P18545	87 aa		5.25	□□□□□ -1.57
PAX6-238	ENST00000638755	PRO0461	Q9UI25	63 aa		5.25	□□□□□ -1.57
PAX6-238	ENST00000638755		A0A1B0GVX0	72 aa		5.24	□□□□□ -1.57
PAX6-238	ENST00000638755	SPRR2D	P22532	72 aa		5.24	□□□□□ -1.57
PAX6-238	ENST00000638755	KRTAP19-8	Q3LI54	63 aa		5.24	□□□□□ -1.57
PAX6-238	ENST00000638755	H1FX-AS1	Q4G0G2	97 aa		5.23	□□□□□ -1.57
PAX6-238	ENST00000638755	LCE1A	Q5T7P2	110 aa		5.23	□□□□□ -1.57
PAX6-238	ENST00000638755	FAM236A	A0A1B0GUQ0	79 aa		5.22	□□□□□ -1.57
PAX6-238	ENST00000638755	FAM236B	A0A1B0GV22	79 aa		5.22	□□□□□ -1.57
PAX6-238	ENST00000638755	C21orf62-AS1	Q17RA5	79 aa		5.22	□□□□□ -1.57
PAX6-238	ENST00000638755	IMUP	Q9GZP8	106 aa		5.22	□□□□□ -1.57
PAX6-238	ENST00000638755		A0A1B0GW54	56 aa		5.21	□□□□□ -1.58
PAX6-238	ENST00000638755		J3KT08	172 aa		5.21	□□□□□ -1.58
PAX6-238	ENST00000638755	NREP	Q16612	68 aa		5.2	□□□□□ -1.58
PAX6-238	ENST00000638755	IGKV3D-7	A0A0C4DH55	119 aa		5.19	□□□□□ -1.58
PAX6-238	ENST00000638755	C8orf87	E5RJ46	101 aa		5.18	□□□□□ -1.58
PAX6-238	ENST00000638755	NDUFB1	O75438	58 aa		5.17	□□□□□ -1.58
PAX6-238	ENST00000638755	SPRR2G	Q9BYE4	73 aa		5.17	□□□□□ -1.58
PAX6-238	ENST00000638755	GTF2H5	Q6ZYL4	71 aa		5.16	□□□□□ -1.58
PAX6-238	ENST00000638755	C8orf17	Q9NRJ1	99 aa		5.16	□□□□□ -1.58
PAX6-238	ENST00000638755		A0A1B0GV90	55 aa		5.15	□□□□□ -1.59
PAX6-238	ENST00000638755		Q6ZVQ6	151 aa		5.15	□□□□□ -1.59
PAX6-238	ENST00000638755	PRR15	Q8IV56	129 aa		5.15	□□□□□ -1.59
PAX6-238	ENST00000638755		K7EQZ3	153 aa		5.14	□□□□□ -1.59
PAX6-238	ENST00000638755	MMP24-AS1	A0A0U1RRL7	71 aa		5.13	□□□□□ -1.59
PAX6-238	ENST00000638755	ETDB	Q3ZM63	59 aa		5.13	□□□□□ -1.59
PAX6-238	ENST00000638755		Q8N9L7	120 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms