RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	NREP	Q16612	68 aa		4.56	□□□□□ -1.68
SPTAN1-238	ENST00000637903		Q96NJ1	140 aa		4.56	□□□□□ -1.68
SPTAN1-238	ENST00000637903	KRTAP19-2	Q3LHN2	52 aa		4.55	□□□□□ -1.68
SPTAN1-238	ENST00000637903	LINC00472	Q9H8W2	130 aa		4.55	□□□□□ -1.68
SPTAN1-238	ENST00000637903	LINC00846	Q9NV44	126 aa		4.55	□□□□□ -1.68
SPTAN1-238	ENST00000637903	IGKV4-1	P06312	121 aa		4.54	□□□□□ -1.68
SPTAN1-238	ENST00000637903	ACYP1	P07311	99 aa		4.54	□□□□□ -1.68
SPTAN1-238	ENST00000637903	DEFB116	Q30KQ4	102 aa		4.54	□□□□□ -1.68
SPTAN1-238	ENST00000637903	FAM240A	A0A1B0GVK7	77 aa		4.53	□□□□□ -1.68
SPTAN1-238	ENST00000637903		Q6ZVQ6	151 aa		4.53	□□□□□ -1.68
SPTAN1-238	ENST00000637903	SIGMAR1	Q99720	223 aa		4.53	□□□□□ -1.68
SPTAN1-238	ENST00000637903	UBL5	Q9BZL1	73 aa		4.53	□□□□□ -1.68
SPTAN1-238	ENST00000637903		J3KT08	172 aa		4.52	□□□□□ -1.69
SPTAN1-238	ENST00000637903		J3QR89	54 aa		4.52	□□□□□ -1.69
SPTAN1-238	ENST00000637903	MT1H	P80294	61 aa		4.51	□□□□□ -1.69
SPTAN1-238	ENST00000637903	BPY2	O14599	106 aa		4.5	□□□□□ -1.69
SPTAN1-238	ENST00000637903	C9orf92	A6NGG3	77 aa		4.48	□□□□□ -1.69
SPTAN1-238	ENST00000637903		A8MWP4	228 aa		4.48	□□□□□ -1.69
SPTAN1-238	ENST00000637903	NDUFB1	O75438	58 aa		4.48	□□□□□ -1.69
SPTAN1-238	ENST00000637903	IGHV6-1	A0A0B4J1U7	121 aa		4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903		A0A1B0GVX0	72 aa		4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903		K7ERU9	68 aa		4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903	LOR	P23490	312 aa	Predicted RBP	4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903	DSCR10	P59022	87 aa		4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903	PCOTH	Q58A44	107 aa		4.47	□□□□□ -1.69
SPTAN1-238	ENST00000637903	IGKV3D-7	A0A0C4DH55	119 aa		4.46	□□□□□ -1.7
SPTAN1-238	ENST00000637903	FSIP2	Q5CZC0	6907 aa		4.46	□□□□□ -1.7
SPTAN1-238	ENST00000637903	C8orf87	E5RJ46	101 aa		4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903		K7EQZ3	153 aa		4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903	LINC00313	P59037	77 aa		4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903	KRTAP10-6	P60371	365 aa	Predicted RBP	4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903	CXCL6	P80162	114 aa		4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903	PRR15	Q8IV56	129 aa		4.45	□□□□□ -1.7
SPTAN1-238	ENST00000637903	ATP5EP2	Q5VTU8	51 aa		4.44	□□□□□ -1.7
SPTAN1-238	ENST00000637903	LINC00643	Q86TS7	51 aa		4.44	□□□□□ -1.7
SPTAN1-238	ENST00000637903	FLG	P20930	4061 aa	Predicted RBP	4.44	□□□□□ -1.7
SPTAN1-238	ENST00000637903	NOTCH2NL	Q7Z3S9	236 aa		4.43	□□□□□ -1.7
SPTAN1-238	ENST00000637903		Q8N9L7	120 aa		4.43	□□□□□ -1.7
SPTAN1-238	ENST00000637903	C8orf17	Q9NRJ1	99 aa		4.43	□□□□□ -1.7
SPTAN1-238	ENST00000637903	MMP24-AS1	A0A0U1RRL7	71 aa		4.41	□□□□□ -1.7
SPTAN1-238	ENST00000637903	KRTAP16-1	A8MUX0	517 aa		4.4	□□□□□ -1.71
SPTAN1-238	ENST00000637903	hDV103S1	A0JD37	113 aa		4.39	□□□□□ -1.71
SPTAN1-238	ENST00000637903	C20orf166-AS1	Q96NR2	134 aa		4.39	□□□□□ -1.71
SPTAN1-238	ENST00000637903	HCG22	E2RYF7	251 aa		4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903	RPL37	P61927	97 aa	Known RBP	4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903	HIST1H4A	P62805	103 aa	Known RBP	4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903		Q75L30	129 aa		4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903	WFDC13	Q8IUB5	93 aa		4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903	TMEM254	Q8TBM7	123 aa		4.38	□□□□□ -1.71
SPTAN1-238	ENST00000637903		A8MUU9	505 aa		4.37	□□□□□ -1.71
SPTAN1-238	ENST00000637903		M0R2T5	61 aa		4.37	□□□□□ -1.71
SPTAN1-238	ENST00000637903	CASC2	Q6XLA1	102 aa		4.37	□□□□□ -1.71
SPTAN1-238	ENST00000637903	MRPL34	Q9BQ48	92 aa	Known RBP	4.37	□□□□□ -1.71
SPTAN1-238	ENST00000637903		Q8N9P0	234 aa	Predicted RBP	4.36	□□□□□ -1.71
SPTAN1-238	ENST00000637903	MT-ATP8	P03928	68 aa		4.35	□□□□□ -1.71
SPTAN1-238	ENST00000637903		A0A087WVE0	104 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	NDUFS5	O43920	106 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	COX6B2	Q6YFQ2	88 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	ATP11AUN	Q6ZP68	121 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	KRTAP3-3	Q9BYR6	98 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	KRTAP3-2	Q9BYR7	98 aa		4.34	□□□□□ -1.71
SPTAN1-238	ENST00000637903	IMUP	Q9GZP8	106 aa		4.32	□□□□□ -1.72
SPTAN1-238	ENST00000637903	ZCCHC13	Q8WW36	166 aa	Known RBP	4.3	□□□□□ -1.72
SPTAN1-238	ENST00000637903	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.28	□□□□□ -1.72
SPTAN1-238	ENST00000637903	TP53AIP1	Q9HCN2	124 aa		4.28	□□□□□ -1.72
SPTAN1-238	ENST00000637903	KRTAP9-7	A8MTY7	169 aa		4.27	□□□□□ -1.73
SPTAN1-238	ENST00000637903	KRTAP9-8	Q9BYQ0	159 aa		4.26	□□□□□ -1.73
SPTAN1-238	ENST00000637903	FAM236A	A0A1B0GUQ0	79 aa		4.25	□□□□□ -1.73
SPTAN1-238	ENST00000637903	FAM236B	A0A1B0GV22	79 aa		4.25	□□□□□ -1.73
SPTAN1-238	ENST00000637903	SCGB1A1	P11684	91 aa		4.25	□□□□□ -1.73
SPTAN1-238	ENST00000637903		Q5W150	140 aa		4.25	□□□□□ -1.73
SPTAN1-238	ENST00000637903	UQCRQ	O14949	82 aa		4.24	□□□□□ -1.73
SPTAN1-238	ENST00000637903	OCR1	Q9BZK8	76 aa		4.22	□□□□□ -1.73
SPTAN1-238	ENST00000637903	TRAV22	A0A0B4J277	110 aa		4.21	□□□□□ -1.74
SPTAN1-238	ENST00000637903	SPINK7	P58062	85 aa		4.21	□□□□□ -1.74
SPTAN1-238	ENST00000637903	IGKV2D-30	A0A075B6S6	120 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903		H0Y9P7	68 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903	ATOX1	O00244	68 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903	IGKV2-30	P06310	120 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903	C7orf65	Q6ZTY9	151 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903	SMIM20	Q8N5G0	67 aa		4.19	□□□□□ -1.74
SPTAN1-238	ENST00000637903	USH2A	O75445	5202 aa		4.18	□□□□□ -1.74
SPTAN1-238	ENST00000637903	TRAV7	A0A075B6U4	112 aa		4.17	□□□□□ -1.74
SPTAN1-238	ENST00000637903	HRES1	P13985	223 aa		4.17	□□□□□ -1.74
SPTAN1-238	ENST00000637903	C5orf47	Q569G3	176 aa		4.17	□□□□□ -1.74
SPTAN1-238	ENST00000637903	SSPO	A2VEC9	5147 aa		4.17	□□□□□ -1.74
SPTAN1-238	ENST00000637903	LOC101927531	A0A1B0GV80	90 aa		4.16	□□□□□ -1.74
SPTAN1-238	ENST00000637903	MP68	P56378	58 aa		4.16	□□□□□ -1.74
SPTAN1-238	ENST00000637903	MT2A	P02795	61 aa		4.15	□□□□□ -1.75
SPTAN1-238	ENST00000637903	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903		H3BPC8	53 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	LCE2B	O14633	110 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	KRTAP19-1	Q8IUB9	90 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	C1orf64	Q8NEQ6	169 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	LINC00208	Q96KT6	92 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	CYP4F30P	Q9H0H9	118 aa		4.14	□□□□□ -1.75
SPTAN1-238	ENST00000637903	MPLKIP	Q8TAP9	179 aa		4.13	□□□□□ -1.75
SPTAN1-238	ENST00000637903	KRTAP9-3	Q9BYQ3	159 aa		4.13	□□□□□ -1.75
SPTAN1-238	ENST00000637903	RBM12B-AS1	Q9P1G2	102 aa		4.13	□□□□□ -1.75
SPTAN1-238	ENST00000637903	MT1F	P04733	61 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms