RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
GABRA1-216ENST00000637044 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
GABRA1-216ENST00000637044 DNAH9Q9NYC9 4486 aa4.98□□□□□ -1.61
GABRA1-216ENST00000637044 ANK2Q01484 3957 aa4.97□□□□□ -1.61
GABRA1-216ENST00000637044 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
GABRA1-216ENST00000637044 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
GABRA1-216ENST00000637044 A6NED7 52 aa4.95□□□□□ -1.62
GABRA1-216ENST00000637044 A0A087X002 238 aa4.94□□□□□ -1.62
GABRA1-216ENST00000637044 C1orf195Q5TG92 126 aa4.94□□□□□ -1.62
GABRA1-216ENST00000637044 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
GABRA1-216ENST00000637044 COA5Q86WW8 74 aa4.91□□□□□ -1.62
GABRA1-216ENST00000637044 PSPHP1O15172 72 aa4.91□□□□□ -1.62
GABRA1-216ENST00000637044 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
GABRA1-216ENST00000637044 PRKDCP78527 4128 aaKnown RBP4.89□□□□□ -1.63
GABRA1-216ENST00000637044 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
GABRA1-216ENST00000637044 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
GABRA1-216ENST00000637044 OXTP01178 125 aa4.88□□□□□ -1.63
GABRA1-216ENST00000637044 K7ERS5 55 aa4.88□□□□□ -1.63
GABRA1-216ENST00000637044 Q5XG85 94 aa4.88□□□□□ -1.63
GABRA1-216ENST00000637044 CYP4F30PQ9H0H9 118 aa4.87□□□□□ -1.63
GABRA1-216ENST00000637044 A0A1B0GU69 56 aa4.87□□□□□ -1.63
GABRA1-216ENST00000637044 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
GABRA1-216ENST00000637044 ZCCHC13Q8WW36 166 aaKnown RBP4.86□□□□□ -1.63
GABRA1-216ENST00000637044 SRRM2Q9UQ35 2752 aaKnown RBP4.85□□□□□ -1.63
GABRA1-216ENST00000637044 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.64
GABRA1-216ENST00000637044 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
GABRA1-216ENST00000637044 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
GABRA1-216ENST00000637044 Q5W150 140 aa4.82□□□□□ -1.64
GABRA1-216ENST00000637044 HRES1P13985 223 aa4.82□□□□□ -1.64
GABRA1-216ENST00000637044 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
GABRA1-216ENST00000637044 A8MUN3 132 aa4.81□□□□□ -1.64
GABRA1-216ENST00000637044 Q8N9P0 234 aaPredicted RBP4.8□□□□□ -1.64
GABRA1-216ENST00000637044 PLECQ15149 4684 aaKnown RBP4.78□□□□□ -1.64
GABRA1-216ENST00000637044 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
GABRA1-216ENST00000637044 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
GABRA1-216ENST00000637044 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
GABRA1-216ENST00000637044 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
GABRA1-216ENST00000637044 STARD9Q9P2P6 4700 aa4.75□□□□□ -1.65
GABRA1-216ENST00000637044 SPINK7P58062 85 aa4.74□□□□□ -1.65
GABRA1-216ENST00000637044 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
GABRA1-216ENST00000637044 DNAH3Q8TD57 4116 aa4.74□□□□□ -1.65
GABRA1-216ENST00000637044 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
GABRA1-216ENST00000637044 Q1T7F1 81 aa4.73□□□□□ -1.65
GABRA1-216ENST00000637044 UQCR11O14957 56 aa4.73□□□□□ -1.65
GABRA1-216ENST00000637044 ALMS1Q8TCU4 4167 aa4.72□□□□□ -1.65
GABRA1-216ENST00000637044 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
GABRA1-216ENST00000637044 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
GABRA1-216ENST00000637044 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
GABRA1-216ENST00000637044 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
GABRA1-216ENST00000637044 Q75L30 129 aa4.67□□□□□ -1.66
GABRA1-216ENST00000637044 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
GABRA1-216ENST00000637044 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
GABRA1-216ENST00000637044 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
GABRA1-216ENST00000637044 A8MUU9 505 aa4.64□□□□□ -1.67
GABRA1-216ENST00000637044 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
GABRA1-216ENST00000637044 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
GABRA1-216ENST00000637044 DNAH1Q9P2D7 4330 aa4.62□□□□□ -1.67
GABRA1-216ENST00000637044 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
GABRA1-216ENST00000637044 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
GABRA1-216ENST00000637044 S4R3F8 94 aa4.6□□□□□ -1.67
GABRA1-216ENST00000637044 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.67
GABRA1-216ENST00000637044 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
GABRA1-216ENST00000637044 DNAH5Q8TE73 4624 aa4.59□□□□□ -1.67
GABRA1-216ENST00000637044 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
GABRA1-216ENST00000637044 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
GABRA1-216ENST00000637044 A0A1B0GU33 70 aa4.57□□□□□ -1.68
GABRA1-216ENST00000637044 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
GABRA1-216ENST00000637044 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
GABRA1-216ENST00000637044 Q5VV11 94 aa4.56□□□□□ -1.68
GABRA1-216ENST00000637044 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
GABRA1-216ENST00000637044 RYR2Q92736 4967 aa4.55□□□□□ -1.68
GABRA1-216ENST00000637044 KMT2AQ03164 3969 aa4.54□□□□□ -1.68
GABRA1-216ENST00000637044 DNAH10Q8IVF4 4471 aa4.54□□□□□ -1.68
GABRA1-216ENST00000637044 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
GABRA1-216ENST00000637044 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
GABRA1-216ENST00000637044 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
GABRA1-216ENST00000637044 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
GABRA1-216ENST00000637044 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
GABRA1-216ENST00000637044 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
GABRA1-216ENST00000637044 M0R2T5 61 aa4.51□□□□□ -1.69
GABRA1-216ENST00000637044 XP32Q5T750 250 aa4.51□□□□□ -1.69
GABRA1-216ENST00000637044 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
GABRA1-216ENST00000637044 RYR3Q15413 4870 aa4.51□□□□□ -1.69
GABRA1-216ENST00000637044 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
GABRA1-216ENST00000637044 DNAH7Q8WXX0 4024 aa4.49□□□□□ -1.69
GABRA1-216ENST00000637044 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
GABRA1-216ENST00000637044 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
GABRA1-216ENST00000637044 FAT1Q14517 4588 aa4.47□□□□□ -1.69
GABRA1-216ENST00000637044 A0A0D9SG42 100 aa4.47□□□□□ -1.69
GABRA1-216ENST00000637044 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
GABRA1-216ENST00000637044 DNAH2Q9P225 4427 aa4.44□□□□□ -1.7
GABRA1-216ENST00000637044 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
GABRA1-216ENST00000637044 LYSTQ99698 3801 aa4.42□□□□□ -1.7
GABRA1-216ENST00000637044 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
GABRA1-216ENST00000637044 R4GN34 69 aa4.41□□□□□ -1.7
GABRA1-216ENST00000637044 RYR1P21817 5038 aa4.41□□□□□ -1.7
GABRA1-216ENST00000637044 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
GABRA1-216ENST00000637044 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
GABRA1-216ENST00000637044 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
GABRA1-216ENST00000637044 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms