RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 UBE2D4Q9Y2X8 147 aa1.14□□□□□ -2.23
CLN5-212ENST00000636602 HYDINQ4G0P3 5121 aa1.14□□□□□ -2.23
CLN5-212ENST00000636602 DNAH17Q9UFH2 4485 aa1.14□□□□□ -2.23
CLN5-212ENST00000636602 LEPROTL1O95214 131 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
CLN5-212ENST00000636602 SEC11AP67812 179 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 ENHOQ6UWT2 76 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 BAGE3Q86Y29 109 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 AMELXQ99217 191 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 C2orf88Q9BSF0 95 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 CDC42SE2Q9NRR3 84 aa1.13□□□□□ -2.23
CLN5-212ENST00000636602 MRPL35Q9NZE8 188 aaKnown RBP1.13□□□□□ -2.23
CLN5-212ENST00000636602 A0A087WTM6 91 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 LINC00959A0A1B0GUT2 108 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 LOC101927531A0A1B0GV80 90 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 IGIPA6NJ69 53 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 UBE2D1P51668 147 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 SFTA2Q6UW10 78 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 CLPSL2Q6UWE3 100 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 Q6ZUT4 128 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 DEFB104AQ8WTQ1 72 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 PKHD1P08F94 4074 aa1.12□□□□□ -2.23
CLN5-212ENST00000636602 RYR3Q15413 4870 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 DNAH5Q8TE73 4624 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 GVQW2A0A096LPI5 108 aaPredicted RBP1.11□□□□□ -2.23
CLN5-212ENST00000636602 F8VRH5 84 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 IGLC3P0DOY3 106 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 PMCHL1Q16048 86 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 ATP11AUNQ6ZP68 121 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 Q8IZM0 81 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 IFI27L1Q96BM0 104 aa1.11□□□□□ -2.23
CLN5-212ENST00000636602 RYR2Q92736 4967 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 FAM236AA0A1B0GUQ0 79 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 FAM236BA0A1B0GV22 79 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 C20orf202A1L168 122 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 LINC00587B1AMM8 73 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 SYS1-DBNDD2H3BUS1 97 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 K7ERU9 68 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 NDUFA1O15239 70 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 PLNP26678 52 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 COX6A2Q02221 97 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 SPAG11BQ08648 103 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 COX17Q14061 63 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 TMEM170BQ5T4T1 132 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 LINC01545Q5VT33 79 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 C5orf38Q86SI9 138 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 PPDPFLQ8WWR9 84 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 LINC00474Q9P2X8 69 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 CDKN2A-AS1Q9UH64 79 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
CLN5-212ENST00000636602 TRBV20-1A0A075B6N2 111 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 MYMXA0A1B0GTQ4 84 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 CCKP06307 115 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 SPINK8P0C7L1 97 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 C3orf79P0CE67 100 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 KRTDAPP60985 99 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 S100A12P80511 92 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 WFDC2Q14508 124 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 COX7B2Q8TF08 81 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 TOMM7Q9P0U1 55 aa1.09□□□□□ -2.23
CLN5-212ENST00000636602 LRP1BQ9NZR2 4599 aa1.09□□□□□ -2.24
CLN5-212ENST00000636602 A0A096LNI7 61 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 MEIG1Q5JSS6 88 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 COPS9Q8WXC6 57 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 PMCHL2Q9BQD1 86 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 VPS25Q9BRG1 176 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 PLAC8Q9NZF1 115 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 C6orf48Q9UBA6 75 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 NDUFA12Q9UI09 145 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 ERG28Q9UKR5 140 aa1.08□□□□□ -2.24
CLN5-212ENST00000636602 APOBP04114 4563 aaKnown RBP1.08□□□□□ -2.24
CLN5-212ENST00000636602 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
CLN5-212ENST00000636602 HSPG2P98160 4391 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 VPS13BQ7Z7G8 4022 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 EPPK1P58107 5090 aaKnown RBP1.07□□□□□ -2.24
CLN5-212ENST00000636602 ZNF815PA8K554 130 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 DLEU1O43261 78 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 IFITM1P13164 125 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 LINC00158P58513 81 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 C9orf116Q5BN46 136 aaPredicted RBP1.07□□□□□ -2.24
CLN5-212ENST00000636602 ATOH7Q8N100 152 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 PLAC4Q8WY50 150 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 DPH3Q96FX2 82 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 VAMP8Q9BV40 100 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 SPANXDQ9BXN6 97 aa1.07□□□□□ -2.24
CLN5-212ENST00000636602 SMIM6P0DI80 62 aa1.06□□□□□ -2.24
CLN5-212ENST00000636602 SMIM13P0DJ93 91 aa1.06□□□□□ -2.24
CLN5-212ENST00000636602 COX8AP10176 69 aa1.06□□□□□ -2.24
CLN5-212ENST00000636602 PYY3Q5JQD4 70 aa1.06□□□□□ -2.24
CLN5-212ENST00000636602 HIGD1BQ9P298 99 aa1.06□□□□□ -2.24
CLN5-212ENST00000636602 PKHD1L1Q86WI1 4243 aa1.05□□□□□ -2.24
CLN5-212ENST00000636602 TRAV13-2A0A0B4J235 113 aa1.05□□□□□ -2.24
CLN5-212ENST00000636602 SMR3BP02814 79 aaPredicted RBP1.05□□□□□ -2.24
CLN5-212ENST00000636602 S100A7L2Q5SY68 101 aa1.05□□□□□ -2.24
CLN5-212ENST00000636602 Q5VSD8 79 aa1.05□□□□□ -2.24
CLN5-212ENST00000636602 LINC00308Q8TCZ7 52 aa1.05□□□□□ -2.24
CLN5-212ENST00000636602 UQCR10Q9UDW1 63 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms