RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 SPRR1AP35321 89 aa8.74□□□□□ -1.01
NEDD4L-238ENST00000635997 LCA10Q71F78 164 aa8.74□□□□□ -1.01
NEDD4L-238ENST00000635997 Q8N1X5 172 aa8.74□□□□□ -1.01
NEDD4L-238ENST00000635997 Q5VV11 94 aa8.7□□□□□ -1.02
NEDD4L-238ENST00000635997 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-238ENST00000635997 Q6ZSA8 131 aa8.68□□□□□ -1.02
NEDD4L-238ENST00000635997 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
NEDD4L-238ENST00000635997 NBPF19A0A087WUL8 3843 aa8.67□□□□□ -1.02
NEDD4L-238ENST00000635997 CSMD2Q7Z408 3487 aa8.65□□□□□ -1.03
NEDD4L-238ENST00000635997 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
NEDD4L-238ENST00000635997 A8MU10 97 aa8.64□□□□□ -1.03
NEDD4L-238ENST00000635997 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
NEDD4L-238ENST00000635997 H3BS24 57 aa8.62□□□□□ -1.03
NEDD4L-238ENST00000635997 SPANXA2-OT1Q8N9U9 137 aa8.61□□□□□ -1.03
NEDD4L-238ENST00000635997 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
NEDD4L-238ENST00000635997 Q75L30 129 aa8.57□□□□□ -1.04
NEDD4L-238ENST00000635997 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
NEDD4L-238ENST00000635997 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
NEDD4L-238ENST00000635997 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
NEDD4L-238ENST00000635997 SPRR1BP22528 89 aa8.54□□□□□ -1.04
NEDD4L-238ENST00000635997 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
NEDD4L-238ENST00000635997 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
NEDD4L-238ENST00000635997 A0A087X002 238 aa8.51□□□□□ -1.05
NEDD4L-238ENST00000635997 SPINK7P58062 85 aa8.51□□□□□ -1.05
NEDD4L-238ENST00000635997 KRTAP4-16G5E9R7 235 aaPredicted RBP8.5□□□□□ -1.05
NEDD4L-238ENST00000635997 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
NEDD4L-238ENST00000635997 A0A0D9SG42 100 aa8.47□□□□□ -1.05
NEDD4L-238ENST00000635997 UQCR11O14957 56 aa8.47□□□□□ -1.05
NEDD4L-238ENST00000635997 HRES1P13985 223 aa8.47□□□□□ -1.05
NEDD4L-238ENST00000635997 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.06
NEDD4L-238ENST00000635997 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
NEDD4L-238ENST00000635997 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
NEDD4L-238ENST00000635997 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
NEDD4L-238ENST00000635997 A6NN06 94 aa8.36□□□□□ -1.07
NEDD4L-238ENST00000635997 Q5W150 140 aa8.36□□□□□ -1.07
NEDD4L-238ENST00000635997 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
NEDD4L-238ENST00000635997 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
NEDD4L-238ENST00000635997 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
NEDD4L-238ENST00000635997 VPS13CQ709C8 3753 aa8.32□□□□□ -1.08
NEDD4L-238ENST00000635997 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
NEDD4L-238ENST00000635997 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
NEDD4L-238ENST00000635997 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
NEDD4L-238ENST00000635997 A0A1B0GU33 70 aa8.18□□□□□ -1.1
NEDD4L-238ENST00000635997 COL7A1Q02388 2944 aa8.17□□□□□ -1.1
NEDD4L-238ENST00000635997 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
NEDD4L-238ENST00000635997 TRRAPQ9Y4A5 3859 aa8.15□□□□□ -1.1
NEDD4L-238ENST00000635997 CRIPTQ9P021 101 aa8.15□□□□□ -1.11
NEDD4L-238ENST00000635997 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
NEDD4L-238ENST00000635997 S4R3F8 94 aa8.13□□□□□ -1.11
NEDD4L-238ENST00000635997 A0A1B0GVY2 172 aa8.12□□□□□ -1.11
NEDD4L-238ENST00000635997 ANK3Q12955 4377 aaKnown RBP8.09□□□□□ -1.12
NEDD4L-238ENST00000635997 R4GN34 69 aa8.05□□□□□ -1.12
NEDD4L-238ENST00000635997 ZNF469Q96JG9 3925 aaPredicted RBP8.02□□□□□ -1.12
NEDD4L-238ENST00000635997 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
NEDD4L-238ENST00000635997 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
NEDD4L-238ENST00000635997 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
NEDD4L-238ENST00000635997 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
NEDD4L-238ENST00000635997 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
NEDD4L-238ENST00000635997 M0QZ58 72 aa7.91□□□□□ -1.14
NEDD4L-238ENST00000635997 MEGF8Q7Z7M0 2845 aa7.9□□□□□ -1.15
NEDD4L-238ENST00000635997 AKAP9Q99996 3911 aa7.85□□□□□ -1.15
NEDD4L-238ENST00000635997 DNHD1Q96M86 4753 aa7.83□□□□□ -1.16
NEDD4L-238ENST00000635997 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
NEDD4L-238ENST00000635997 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-238ENST00000635997 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
NEDD4L-238ENST00000635997 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
NEDD4L-238ENST00000635997 ROMO1P60602 79 aa7.77□□□□□ -1.16
NEDD4L-238ENST00000635997 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
NEDD4L-238ENST00000635997 KRTAP10-8P60410 259 aa7.71□□□□□ -1.17
NEDD4L-238ENST00000635997 A8MUU9 505 aa7.7□□□□□ -1.18
NEDD4L-238ENST00000635997 XP32Q5T750 250 aa7.68□□□□□ -1.18
NEDD4L-238ENST00000635997 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
NEDD4L-238ENST00000635997 KRTAP4-5Q9BYR2 181 aa7.65□□□□□ -1.18
NEDD4L-238ENST00000635997 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
NEDD4L-238ENST00000635997 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
NEDD4L-238ENST00000635997 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
NEDD4L-238ENST00000635997 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
NEDD4L-238ENST00000635997 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
NEDD4L-238ENST00000635997 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
NEDD4L-238ENST00000635997 H0YAA0 97 aa7.47□□□□□ -1.21
NEDD4L-238ENST00000635997 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
NEDD4L-238ENST00000635997 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
NEDD4L-238ENST00000635997 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.22
NEDD4L-238ENST00000635997 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
NEDD4L-238ENST00000635997 P0C880 135 aa7.28□□□□□ -1.24
NEDD4L-238ENST00000635997 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
NEDD4L-238ENST00000635997 DNAH10Q8IVF4 4471 aa7.18□□□□□ -1.26
NEDD4L-238ENST00000635997 TNP1P09430 55 aa7.16□□□□□ -1.26
NEDD4L-238ENST00000635997 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
NEDD4L-238ENST00000635997 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
NEDD4L-238ENST00000635997 ANK2Q01484 3957 aa7.08□□□□□ -1.28
NEDD4L-238ENST00000635997 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.28
NEDD4L-238ENST00000635997 DNAH1Q9P2D7 4330 aa7.02□□□□□ -1.29
NEDD4L-238ENST00000635997 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
NEDD4L-238ENST00000635997 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.3
NEDD4L-238ENST00000635997 RYR1P21817 5038 aa6.95□□□□□ -1.3
NEDD4L-238ENST00000635997 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
NEDD4L-238ENST00000635997 DNAH3Q8TD57 4116 aa6.94□□□□□ -1.3
NEDD4L-238ENST00000635997 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
NEDD4L-238ENST00000635997 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms