RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	SPATA45	Q537H7	98 aa		5.29	□□□□□ -1.56
UBE3A-223	ENST00000631247	VAMP8	Q9BV40	100 aa		5.29	□□□□□ -1.56
UBE3A-223	ENST00000631247	SSPO	A2VEC9	5147 aa		5.29	□□□□□ -1.56
UBE3A-223	ENST00000631247	PRO1854	Q9UHT4	67 aa		5.28	□□□□□ -1.56
UBE3A-223	ENST00000631247		A0A1B0GV72	72 aa		5.27	□□□□□ -1.57
UBE3A-223	ENST00000631247	IGKV4-1	P06312	121 aa		5.27	□□□□□ -1.57
UBE3A-223	ENST00000631247	LINC00313	P59037	77 aa		5.27	□□□□□ -1.57
UBE3A-223	ENST00000631247	CEND1	Q8N111	149 aa		5.27	□□□□□ -1.57
UBE3A-223	ENST00000631247	C2orf91	Q6ZV80	131 aa		5.26	□□□□□ -1.57
UBE3A-223	ENST00000631247	ANKRD29	Q8N6D5	301 aa		5.26	□□□□□ -1.57
UBE3A-223	ENST00000631247		A0A1W2PNM2	257 aa		5.25	□□□□□ -1.57
UBE3A-223	ENST00000631247	ORMDL1	Q9P0S3	153 aa		5.25	□□□□□ -1.57
UBE3A-223	ENST00000631247	RBM12B-AS1	Q9P1G2	102 aa		5.25	□□□□□ -1.57
UBE3A-223	ENST00000631247	TRBV7-4	A0A0J9YYF1	115 aa		5.24	□□□□□ -1.57
UBE3A-223	ENST00000631247		H3BQ85	93 aa		5.24	□□□□□ -1.57
UBE3A-223	ENST00000631247	PSMB2	P49721	201 aa		5.24	□□□□□ -1.57
UBE3A-223	ENST00000631247	TRAC	P01848	142 aa		5.23	□□□□□ -1.57
UBE3A-223	ENST00000631247	IGHV6-1	A0A0B4J1U7	121 aa		5.22	□□□□□ -1.57
UBE3A-223	ENST00000631247	CCK	P06307	115 aa		5.22	□□□□□ -1.57
UBE3A-223	ENST00000631247	FXYD2	P54710	66 aa		5.22	□□□□□ -1.57
UBE3A-223	ENST00000631247	DEFB116	Q30KQ4	102 aa		5.22	□□□□□ -1.57
UBE3A-223	ENST00000631247	KRTAP16-1	A8MUX0	517 aa		5.21	□□□□□ -1.58
UBE3A-223	ENST00000631247	TMEM256-PLSCR3	K7ERE1	68 aa		5.21	□□□□□ -1.58
UBE3A-223	ENST00000631247	COX6C	P09669	75 aa		5.21	□□□□□ -1.58
UBE3A-223	ENST00000631247	VPS25	Q9BRG1	176 aa		5.19	□□□□□ -1.58
UBE3A-223	ENST00000631247		K7ERJ3	54 aa		5.18	□□□□□ -1.58
UBE3A-223	ENST00000631247	HSD52	Q0P140	79 aa		5.18	□□□□□ -1.58
UBE3A-223	ENST00000631247	NOTCH2NL	Q7Z3S9	236 aa		5.18	□□□□□ -1.58
UBE3A-223	ENST00000631247	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	C8orf87	E5RJ46	101 aa		5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	MT2A	P02795	61 aa		5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	HRES1	P13985	223 aa		5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	MTURN	Q8N3F0	131 aa		5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	LINC00472	Q9H8W2	130 aa		5.17	□□□□□ -1.58
UBE3A-223	ENST00000631247	MACF1	Q9UPN3	7388 aa	Known RBP	5.16	□□□□□ -1.58
UBE3A-223	ENST00000631247		A0A1B0GVX0	72 aa		5.15	□□□□□ -1.59
UBE3A-223	ENST00000631247	IGKV2-30	P06310	120 aa		5.15	□□□□□ -1.59
UBE3A-223	ENST00000631247	KRTAP10-10	P60014	251 aa		5.15	□□□□□ -1.59
UBE3A-223	ENST00000631247	DSCR8	Q96T75	97 aa		5.15	□□□□□ -1.59
UBE3A-223	ENST00000631247	MT1F	P04733	61 aa		5.13	□□□□□ -1.59
UBE3A-223	ENST00000631247	RBM3	P98179	157 aa	Known RBP	5.13	□□□□□ -1.59
UBE3A-223	ENST00000631247	SYNE2	Q8WXH0	6885 aa	Known RBP	5.13	□□□□□ -1.59
UBE3A-223	ENST00000631247		J3KT08	172 aa		5.12	□□□□□ -1.59
UBE3A-223	ENST00000631247	SCGB1C2	P0DMR2	95 aa		5.12	□□□□□ -1.59
UBE3A-223	ENST00000631247	ZCCHC13	Q8WW36	166 aa	Known RBP	5.12	□□□□□ -1.59
UBE3A-223	ENST00000631247	LYRM7	Q5U5X0	104 aa		5.11	□□□□□ -1.59
UBE3A-223	ENST00000631247		C9JAW5	83 aa		5.1	□□□□□ -1.59
UBE3A-223	ENST00000631247	NDUFB1	O75438	58 aa		5.1	□□□□□ -1.59
UBE3A-223	ENST00000631247	SPINK7	P58062	85 aa		5.09	□□□□□ -1.59
UBE3A-223	ENST00000631247	UQCR10	Q9UDW1	63 aa		5.09	□□□□□ -1.59
UBE3A-223	ENST00000631247	PYY3	Q5JQD4	70 aa		5.08	□□□□□ -1.6
UBE3A-223	ENST00000631247	LCE1A	Q5T7P2	110 aa		5.07	□□□□□ -1.6
UBE3A-223	ENST00000631247	BAALC-AS2	P0C853	105 aa		5.06	□□□□□ -1.6
UBE3A-223	ENST00000631247		Q6ZQT0	140 aa		5.06	□□□□□ -1.6
UBE3A-223	ENST00000631247	WFDC13	Q8IUB5	93 aa		5.06	□□□□□ -1.6
UBE3A-223	ENST00000631247		Q8N9P0	234 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE3A-223	ENST00000631247	LINC00846	Q9NV44	126 aa		5.06	□□□□□ -1.6
UBE3A-223	ENST00000631247		A8MWP4	228 aa		5.03	□□□□□ -1.6
UBE3A-223	ENST00000631247	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.03	□□□□□ -1.6
UBE3A-223	ENST00000631247	C8orf17	Q9NRJ1	99 aa		5.03	□□□□□ -1.6
UBE3A-223	ENST00000631247	ATXN8	Q156A1	80 aa		5.01	□□□□□ -1.61
UBE3A-223	ENST00000631247	IGKV3D-7	A0A0C4DH55	119 aa		5	□□□□□ -1.61
UBE3A-223	ENST00000631247		A0A1B0GW54	56 aa		5	□□□□□ -1.61
UBE3A-223	ENST00000631247		Q6ZVQ6	151 aa		5	□□□□□ -1.61
UBE3A-223	ENST00000631247	LOC110117498	A0A087WWA1	95 aa		4.99	□□□□□ -1.61
UBE3A-223	ENST00000631247	PDE6G	P18545	87 aa		4.99	□□□□□ -1.61
UBE3A-223	ENST00000631247		M0R143	59 aa		4.97	□□□□□ -1.61
UBE3A-223	ENST00000631247	NAA38	Q9BRA0	125 aa	Known RBP	4.97	□□□□□ -1.61
UBE3A-223	ENST00000631247	NDUFS5	O43920	106 aa		4.96	□□□□□ -1.62
UBE3A-223	ENST00000631247	NREP	Q16612	68 aa		4.96	□□□□□ -1.62
UBE3A-223	ENST00000631247	C14orf132	Q9NPU4	83 aa		4.96	□□□□□ -1.62
UBE3A-223	ENST00000631247	PRR15	Q8IV56	129 aa		4.95	□□□□□ -1.62
UBE3A-223	ENST00000631247	MRPL34	Q9BQ48	92 aa	Known RBP	4.95	□□□□□ -1.62
UBE3A-223	ENST00000631247	IGKV2D-30	A0A075B6S6	120 aa		4.94	□□□□□ -1.62
UBE3A-223	ENST00000631247	KRTAP19-6	Q3LI70	58 aa		4.94	□□□□□ -1.62
UBE3A-223	ENST00000631247	TMEM254	Q8TBM7	123 aa		4.94	□□□□□ -1.62
UBE3A-223	ENST00000631247	PRAC1	Q96KF2	57 aa		4.94	□□□□□ -1.62
UBE3A-223	ENST00000631247	MMP24-AS1	A0A0U1RRL7	71 aa		4.93	□□□□□ -1.62
UBE3A-223	ENST00000631247	H1FX-AS1	Q4G0G2	97 aa		4.93	□□□□□ -1.62
UBE3A-223	ENST00000631247	hDV103S1	A0JD37	113 aa		4.92	□□□□□ -1.62
UBE3A-223	ENST00000631247		K7EQZ3	153 aa		4.9	□□□□□ -1.63
UBE3A-223	ENST00000631247	C7orf65	Q6ZTY9	151 aa		4.89	□□□□□ -1.63
UBE3A-223	ENST00000631247	BPY2	O14599	106 aa		4.87	□□□□□ -1.63
UBE3A-223	ENST00000631247	BATF	Q16520	125 aa		4.86	□□□□□ -1.63
UBE3A-223	ENST00000631247	TSTD3	H0UI37	97 aa		4.84	□□□□□ -1.63
UBE3A-223	ENST00000631247		H3BT86	120 aa		4.84	□□□□□ -1.63
UBE3A-223	ENST00000631247	CASC2	Q6XLA1	102 aa		4.83	□□□□□ -1.64
UBE3A-223	ENST00000631247	HCG22	E2RYF7	251 aa		4.82	□□□□□ -1.64
UBE3A-223	ENST00000631247	SMIM6	P0DI80	62 aa		4.81	□□□□□ -1.64
UBE3A-223	ENST00000631247	C4orf26	Q17RF5	130 aa		4.81	□□□□□ -1.64
UBE3A-223	ENST00000631247		Q5W150	140 aa		4.81	□□□□□ -1.64
UBE3A-223	ENST00000631247	NEB	P20929	6669 aa		4.8	□□□□□ -1.64
UBE3A-223	ENST00000631247	FAM236A	A0A1B0GUQ0	79 aa		4.8	□□□□□ -1.64
UBE3A-223	ENST00000631247	FAM236B	A0A1B0GV22	79 aa		4.8	□□□□□ -1.64
UBE3A-223	ENST00000631247		Q8N9L7	120 aa		4.8	□□□□□ -1.64
UBE3A-223	ENST00000631247	KRTAP6-3	Q3LI67	103 aa		4.79	□□□□□ -1.64
UBE3A-223	ENST00000631247		A0A1W2PPM0	123 aa		4.78	□□□□□ -1.64
UBE3A-223	ENST00000631247	KRTAP10-7	P60409	375 aa	Predicted RBP	4.78	□□□□□ -1.64
UBE3A-223	ENST00000631247	CXCL6	P80162	114 aa		4.78	□□□□□ -1.64
UBE3A-223	ENST00000631247	C5orf47	Q569G3	176 aa		4.78	□□□□□ -1.64

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