RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
NEK3-211ENST00000629912 SNURFQ9Y675 71 aa3.25□□□□□ -1.89
NEK3-211ENST00000629912 A0A087X002 238 aa3.24□□□□□ -1.89
NEK3-211ENST00000629912 hDV103S1A0JD37 113 aa3.24□□□□□ -1.89
NEK3-211ENST00000629912 H3BPC8 53 aa3.24□□□□□ -1.89
NEK3-211ENST00000629912 CDK2AP2O75956 126 aa3.24□□□□□ -1.89
NEK3-211ENST00000629912 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
NEK3-211ENST00000629912 PLA2G1BP04054 148 aaKnown RBP3.23□□□□□ -1.89
NEK3-211ENST00000629912 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
NEK3-211ENST00000629912 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
NEK3-211ENST00000629912 FAM236DA0A1B0GTK5 79 aa3.22□□□□□ -1.89
NEK3-211ENST00000629912 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
NEK3-211ENST00000629912 FAM236CP0DP71 79 aa3.22□□□□□ -1.89
NEK3-211ENST00000629912 MP68P56378 58 aa3.22□□□□□ -1.89
NEK3-211ENST00000629912 ATP5EP56381 51 aaPredicted RBP3.22□□□□□ -1.89
NEK3-211ENST00000629912 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
NEK3-211ENST00000629912 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.9
NEK3-211ENST00000629912 C1orf195Q5TG92 126 aa3.21□□□□□ -1.9
NEK3-211ENST00000629912 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
NEK3-211ENST00000629912 FAT1Q14517 4588 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 SPINK1P00995 79 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
NEK3-211ENST00000629912 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
NEK3-211ENST00000629912 C4orf48Q5BLP8 95 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 TYMSOSQ8TAI1 123 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 LIMD2Q9BT23 127 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
NEK3-211ENST00000629912 KMT2CQ8NEZ4 4911 aaKnown RBP3.19□□□□□ -1.9
NEK3-211ENST00000629912 H0Y9P7 68 aa3.19□□□□□ -1.9
NEK3-211ENST00000629912 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
NEK3-211ENST00000629912 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
NEK3-211ENST00000629912 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
NEK3-211ENST00000629912 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
NEK3-211ENST00000629912 TRAV22A0A0B4J277 110 aa3.18□□□□□ -1.9
NEK3-211ENST00000629912 LINC00313P59037 77 aa3.18□□□□□ -1.9
NEK3-211ENST00000629912 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
NEK3-211ENST00000629912 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
NEK3-211ENST00000629912 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
NEK3-211ENST00000629912 OXTP01178 125 aa3.16□□□□□ -1.9
NEK3-211ENST00000629912 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
NEK3-211ENST00000629912 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
NEK3-211ENST00000629912 CYP4F30PQ9H0H9 118 aa3.16□□□□□ -1.9
NEK3-211ENST00000629912 NDUFS5O43920 106 aa3.15□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
NEK3-211ENST00000629912 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
NEK3-211ENST00000629912 FAM229AH3BQW9 127 aa3.14□□□□□ -1.91
NEK3-211ENST00000629912 RYR3Q15413 4870 aa3.14□□□□□ -1.91
NEK3-211ENST00000629912 RYR1P21817 5038 aa3.13□□□□□ -1.91
NEK3-211ENST00000629912 IGLV7-46A0A075B6I9 117 aa3.13□□□□□ -1.91
NEK3-211ENST00000629912 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
NEK3-211ENST00000629912 Q5W150 140 aa3.13□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
NEK3-211ENST00000629912 HSPG2P98160 4391 aa3.12□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
NEK3-211ENST00000629912 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
NEK3-211ENST00000629912 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
NEK3-211ENST00000629912 TNXBP22105 4242 aa3.09□□□□□ -1.91
NEK3-211ENST00000629912 FP248Q71RG6 208 aaPredicted RBP3.09□□□□□ -1.91
NEK3-211ENST00000629912 IGKV2-30P06310 120 aa3.08□□□□□ -1.92
NEK3-211ENST00000629912 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
NEK3-211ENST00000629912 Q5VSD8 79 aa3.08□□□□□ -1.92
NEK3-211ENST00000629912 PRR4Q16378 134 aa3.07□□□□□ -1.92
NEK3-211ENST00000629912 Q8N1X5 172 aa3.07□□□□□ -1.92
NEK3-211ENST00000629912 A8MUU9 505 aa3.06□□□□□ -1.92
NEK3-211ENST00000629912 C4orf26Q17RF5 130 aa3.06□□□□□ -1.92
NEK3-211ENST00000629912 Q1T7F1 81 aa3.06□□□□□ -1.92
NEK3-211ENST00000629912 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
NEK3-211ENST00000629912 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
NEK3-211ENST00000629912 FLG2Q5D862 2391 aaPredicted RBP3.05□□□□□ -1.92
NEK3-211ENST00000629912 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
NEK3-211ENST00000629912 KRTAP17-1Q9BYP8 105 aa3.05□□□□□ -1.92
NEK3-211ENST00000629912 HRES1P13985 223 aa3.04□□□□□ -1.92
NEK3-211ENST00000629912 ACYP2P14621 99 aa3.04□□□□□ -1.92
NEK3-211ENST00000629912 COA5Q86WW8 74 aa3.04□□□□□ -1.92
NEK3-211ENST00000629912 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
NEK3-211ENST00000629912 V9GYY9 64 aa3.04□□□□□ -1.92
NEK3-211ENST00000629912 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.92
NEK3-211ENST00000629912 Q75L30 129 aa3.02□□□□□ -1.93
NEK3-211ENST00000629912 MPLKIPQ8TAP9 179 aa3.02□□□□□ -1.93
NEK3-211ENST00000629912 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
NEK3-211ENST00000629912 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
NEK3-211ENST00000629912 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
NEK3-211ENST00000629912 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
NEK3-211ENST00000629912 IGKV2D-30A0A075B6S6 120 aa3□□□□□ -1.93
NEK3-211ENST00000629912 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
NEK3-211ENST00000629912 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
NEK3-211ENST00000629912 DMBT1Q9UGM3 2413 aaPredicted RBP2.99□□□□□ -1.93
NEK3-211ENST00000629912 A8MUN3 132 aa2.98□□□□□ -1.93
NEK3-211ENST00000629912 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
NEK3-211ENST00000629912 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
NEK3-211ENST00000629912 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
NEK3-211ENST00000629912 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
NEK3-211ENST00000629912 SPINK7P58062 85 aa2.96□□□□□ -1.94
NEK3-211ENST00000629912 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.94
NEK3-211ENST00000629912 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
NEK3-211ENST00000629912 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
NEK3-211ENST00000629912 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms