RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
PKP4-217ENST00000628904 LINC00313P59037 77 aa4.45□□□□□ -1.7
PKP4-217ENST00000628904 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
PKP4-217ENST00000628904 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
PKP4-217ENST00000628904 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PKP4-217ENST00000628904 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
PKP4-217ENST00000628904 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
PKP4-217ENST00000628904 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
PKP4-217ENST00000628904 KRTAP13-1Q8IUC0 172 aa4.42□□□□□ -1.7
PKP4-217ENST00000628904 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
PKP4-217ENST00000628904 A0A1B0GW54 56 aa4.42□□□□□ -1.7
PKP4-217ENST00000628904 SPRR1BP22528 89 aa4.42□□□□□ -1.7
PKP4-217ENST00000628904 A6NED7 52 aa4.41□□□□□ -1.7
PKP4-217ENST00000628904 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
PKP4-217ENST00000628904 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
PKP4-217ENST00000628904 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
PKP4-217ENST00000628904 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
PKP4-217ENST00000628904 A8MUN3 132 aa4.39□□□□□ -1.71
PKP4-217ENST00000628904 CD164Q04900 197 aa4.39□□□□□ -1.71
PKP4-217ENST00000628904 KRTAP13-2Q52LG2 175 aa4.39□□□□□ -1.71
PKP4-217ENST00000628904 SSBP3-AS1Q7Z2R9 100 aa4.38□□□□□ -1.71
PKP4-217ENST00000628904 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
PKP4-217ENST00000628904 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
PKP4-217ENST00000628904 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
PKP4-217ENST00000628904 Q5W150 140 aa4.37□□□□□ -1.71
PKP4-217ENST00000628904 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
PKP4-217ENST00000628904 Q8N1X5 172 aa4.37□□□□□ -1.71
PKP4-217ENST00000628904 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
PKP4-217ENST00000628904 DNAH8Q96JB1 4490 aa4.35□□□□□ -1.71
PKP4-217ENST00000628904 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
PKP4-217ENST00000628904 COA5Q86WW8 74 aa4.35□□□□□ -1.71
PKP4-217ENST00000628904 FAT1Q14517 4588 aa4.35□□□□□ -1.71
PKP4-217ENST00000628904 LINC00483Q53H64 154 aa4.35□□□□□ -1.71
PKP4-217ENST00000628904 LCE6AA0A183 80 aa4.34□□□□□ -1.71
PKP4-217ENST00000628904 HYDINQ4G0P3 5121 aa4.34□□□□□ -1.71
PKP4-217ENST00000628904 Q1T7F1 81 aa4.34□□□□□ -1.72
PKP4-217ENST00000628904 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.72
PKP4-217ENST00000628904 TP53AIP1Q9HCN2 124 aa4.34□□□□□ -1.72
PKP4-217ENST00000628904 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
PKP4-217ENST00000628904 DNAH2Q9P225 4427 aa4.32□□□□□ -1.72
PKP4-217ENST00000628904 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
PKP4-217ENST00000628904 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
PKP4-217ENST00000628904 DNAH5Q8TE73 4624 aa4.29□□□□□ -1.72
PKP4-217ENST00000628904 HRES1P13985 223 aa4.29□□□□□ -1.72
PKP4-217ENST00000628904 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
PKP4-217ENST00000628904 PKHD1P08F94 4074 aa4.28□□□□□ -1.73
PKP4-217ENST00000628904 A8MU10 97 aa4.27□□□□□ -1.73
PKP4-217ENST00000628904 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
PKP4-217ENST00000628904 Q5VSD8 79 aa4.27□□□□□ -1.73
PKP4-217ENST00000628904 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
PKP4-217ENST00000628904 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
PKP4-217ENST00000628904 Q6ZSA8 131 aa4.26□□□□□ -1.73
PKP4-217ENST00000628904 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
PKP4-217ENST00000628904 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
PKP4-217ENST00000628904 H3BPC8 53 aa4.24□□□□□ -1.73
PKP4-217ENST00000628904 ACYP2P14621 99 aa4.24□□□□□ -1.73
PKP4-217ENST00000628904 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
PKP4-217ENST00000628904 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
PKP4-217ENST00000628904 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
PKP4-217ENST00000628904 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
PKP4-217ENST00000628904 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
PKP4-217ENST00000628904 HECTD4Q9Y4D8 3996 aa4.22□□□□□ -1.73
PKP4-217ENST00000628904 A0A1B0GU69 56 aa4.21□□□□□ -1.74
PKP4-217ENST00000628904 VPS13BQ7Z7G8 4022 aa4.2□□□□□ -1.74
PKP4-217ENST00000628904 ATP11AUNQ6ZP68 121 aa4.2□□□□□ -1.74
PKP4-217ENST00000628904 A6NN06 94 aa4.19□□□□□ -1.74
PKP4-217ENST00000628904 Q5VV11 94 aa4.19□□□□□ -1.74
PKP4-217ENST00000628904 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
PKP4-217ENST00000628904 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
PKP4-217ENST00000628904 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
PKP4-217ENST00000628904 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
PKP4-217ENST00000628904 SPINK7P58062 85 aa4.17□□□□□ -1.74
PKP4-217ENST00000628904 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
PKP4-217ENST00000628904 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
PKP4-217ENST00000628904 FAT2Q9NYQ8 4349 aa4.15□□□□□ -1.75
PKP4-217ENST00000628904 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
PKP4-217ENST00000628904 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
PKP4-217ENST00000628904 LCA10Q71F78 164 aa4.12□□□□□ -1.75
PKP4-217ENST00000628904 Q75L30 129 aa4.12□□□□□ -1.75
PKP4-217ENST00000628904 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
PKP4-217ENST00000628904 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
PKP4-217ENST00000628904 A0A0D9SG42 100 aa4.1□□□□□ -1.75
PKP4-217ENST00000628904 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
PKP4-217ENST00000628904 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
PKP4-217ENST00000628904 RYR1P21817 5038 aa4.08□□□□□ -1.76
PKP4-217ENST00000628904 RYR3Q15413 4870 aa4.08□□□□□ -1.76
PKP4-217ENST00000628904 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
PKP4-217ENST00000628904 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
PKP4-217ENST00000628904 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
PKP4-217ENST00000628904 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
PKP4-217ENST00000628904 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
PKP4-217ENST00000628904 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
PKP4-217ENST00000628904 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
PKP4-217ENST00000628904 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
PKP4-217ENST00000628904 UQCR11O14957 56 aa4.03□□□□□ -1.76
PKP4-217ENST00000628904 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
PKP4-217ENST00000628904 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
PKP4-217ENST00000628904 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
PKP4-217ENST00000628904 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
PKP4-217ENST00000628904 RYR2Q92736 4967 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms