RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ANKRD29Q8N6D5 301 aa5.33□□□□□ -1.56
LINC01560-202ENST00000624822 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
LINC01560-202ENST00000624822 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
LINC01560-202ENST00000624822 ETDBQ3ZM63 59 aa5.31□□□□□ -1.56
LINC01560-202ENST00000624822 Q6Q795 121 aa5.31□□□□□ -1.56
LINC01560-202ENST00000624822 SS18L2Q9UHA2 77 aa5.31□□□□□ -1.56
LINC01560-202ENST00000624822 A0A087WSZ3 146 aa5.3□□□□□ -1.56
LINC01560-202ENST00000624822 VPS25Q9BRG1 176 aa5.3□□□□□ -1.56
LINC01560-202ENST00000624822 K7ERU9 68 aa5.29□□□□□ -1.56
LINC01560-202ENST00000624822 RBM3P98179 157 aaKnown RBP5.29□□□□□ -1.56
LINC01560-202ENST00000624822 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
LINC01560-202ENST00000624822 DSCR8Q96T75 97 aa5.29□□□□□ -1.56
LINC01560-202ENST00000624822 A0A1W2PNM2 257 aa5.28□□□□□ -1.56
LINC01560-202ENST00000624822 CCKP06307 115 aa5.28□□□□□ -1.56
LINC01560-202ENST00000624822 H3BT86 120 aa5.27□□□□□ -1.57
LINC01560-202ENST00000624822 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
LINC01560-202ENST00000624822 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
LINC01560-202ENST00000624822 JMJD7-PLA2G4BH0Y9G9 81 aa5.26□□□□□ -1.57
LINC01560-202ENST00000624822 J3QR89 54 aa5.26□□□□□ -1.57
LINC01560-202ENST00000624822 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
LINC01560-202ENST00000624822 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
LINC01560-202ENST00000624822 SIGMAR1Q99720 223 aa5.23□□□□□ -1.57
LINC01560-202ENST00000624822 C14orf132Q9NPU4 83 aa5.22□□□□□ -1.57
LINC01560-202ENST00000624822 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
LINC01560-202ENST00000624822 Q96NJ1 140 aa5.21□□□□□ -1.58
LINC01560-202ENST00000624822 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
LINC01560-202ENST00000624822 IGKV4-1P06312 121 aa5.2□□□□□ -1.58
LINC01560-202ENST00000624822 DEFB116Q30KQ4 102 aa5.2□□□□□ -1.58
LINC01560-202ENST00000624822 Q6ZQT0 140 aa5.2□□□□□ -1.58
LINC01560-202ENST00000624822 LOC110117498A0A087WWA1 95 aa5.19□□□□□ -1.58
LINC01560-202ENST00000624822 PDE6GP18545 87 aa5.19□□□□□ -1.58
LINC01560-202ENST00000624822 OBSCN-AS1Q96MR7 158 aa5.19□□□□□ -1.58
LINC01560-202ENST00000624822 A0A0U1RQV1 116 aa5.16□□□□□ -1.58
LINC01560-202ENST00000624822 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
LINC01560-202ENST00000624822 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
LINC01560-202ENST00000624822 LINC00472Q9H8W2 130 aa5.16□□□□□ -1.58
LINC01560-202ENST00000624822 A0A1B0GW54 56 aa5.15□□□□□ -1.59
LINC01560-202ENST00000624822 DSCR10P59022 87 aa5.15□□□□□ -1.59
LINC01560-202ENST00000624822 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
LINC01560-202ENST00000624822 LINC00313P59037 77 aa5.13□□□□□ -1.59
LINC01560-202ENST00000624822 J3KT08 172 aa5.12□□□□□ -1.59
LINC01560-202ENST00000624822 NREPQ16612 68 aa5.12□□□□□ -1.59
LINC01560-202ENST00000624822 MUC2Q02817 5179 aa5.12□□□□□ -1.59
LINC01560-202ENST00000624822 NDUFB1O75438 58 aa5.11□□□□□ -1.59
LINC01560-202ENST00000624822 ATP11AUNQ6ZP68 121 aa5.11□□□□□ -1.59
LINC01560-202ENST00000624822 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
LINC01560-202ENST00000624822 FAM240AA0A1B0GVK7 77 aa5.1□□□□□ -1.59
LINC01560-202ENST00000624822 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
LINC01560-202ENST00000624822 ACYP1P07311 99 aa5.1□□□□□ -1.59
LINC01560-202ENST00000624822 Q75L30 129 aa5.1□□□□□ -1.59
LINC01560-202ENST00000624822 C8orf87E5RJ46 101 aa5.08□□□□□ -1.6
LINC01560-202ENST00000624822 MT-ATP8P03928 68 aa5.08□□□□□ -1.6
LINC01560-202ENST00000624822 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
LINC01560-202ENST00000624822 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
LINC01560-202ENST00000624822 A8MUU9 505 aa5.07□□□□□ -1.6
LINC01560-202ENST00000624822 A8MWP4 228 aa5.06□□□□□ -1.6
LINC01560-202ENST00000624822 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
LINC01560-202ENST00000624822 IGKV3D-7A0A0C4DH55 119 aa5.04□□□□□ -1.6
LINC01560-202ENST00000624822 BPY2O14599 106 aa5.04□□□□□ -1.6
LINC01560-202ENST00000624822 Q6ZVQ6 151 aa5.03□□□□□ -1.6
LINC01560-202ENST00000624822 UBL5Q9BZL1 73 aa5.03□□□□□ -1.6
LINC01560-202ENST00000624822 C8orf17Q9NRJ1 99 aa5.03□□□□□ -1.6
LINC01560-202ENST00000624822 LINC00846Q9NV44 126 aa5.03□□□□□ -1.6
LINC01560-202ENST00000624822 LINC00643Q86TS7 51 aa5.02□□□□□ -1.61
LINC01560-202ENST00000624822 PRR15Q8IV56 129 aa5.02□□□□□ -1.61
LINC01560-202ENST00000624822 K7EQZ3 153 aa5.01□□□□□ -1.61
LINC01560-202ENST00000624822 SCGB1A1P11684 91 aa5.01□□□□□ -1.61
LINC01560-202ENST00000624822 PCP4P48539 62 aa5□□□□□ -1.61
LINC01560-202ENST00000624822 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
LINC01560-202ENST00000624822 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
LINC01560-202ENST00000624822 Q8N9L7 120 aa4.98□□□□□ -1.61
LINC01560-202ENST00000624822 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
LINC01560-202ENST00000624822 hDV103S1A0JD37 113 aa4.97□□□□□ -1.61
LINC01560-202ENST00000624822 NDUFS5O43920 106 aa4.97□□□□□ -1.61
LINC01560-202ENST00000624822 TMEM254Q8TBM7 123 aa4.97□□□□□ -1.61
LINC01560-202ENST00000624822 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
LINC01560-202ENST00000624822 WFDC13Q8IUB5 93 aa4.96□□□□□ -1.62
LINC01560-202ENST00000624822 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
LINC01560-202ENST00000624822 ATP5EP2Q5VTU8 51 aa4.95□□□□□ -1.62
LINC01560-202ENST00000624822 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
LINC01560-202ENST00000624822 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
LINC01560-202ENST00000624822 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
LINC01560-202ENST00000624822 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
LINC01560-202ENST00000624822 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
LINC01560-202ENST00000624822 FAM236AA0A1B0GUQ0 79 aa4.91□□□□□ -1.62
LINC01560-202ENST00000624822 FAM236BA0A1B0GV22 79 aa4.91□□□□□ -1.62
LINC01560-202ENST00000624822 FAM236DA0A1B0GTK5 79 aa4.9□□□□□ -1.63
LINC01560-202ENST00000624822 HCG22E2RYF7 251 aa4.9□□□□□ -1.63
LINC01560-202ENST00000624822 FAM236CP0DP71 79 aa4.9□□□□□ -1.63
LINC01560-202ENST00000624822 CXCL6P80162 114 aa4.9□□□□□ -1.63
LINC01560-202ENST00000624822 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
LINC01560-202ENST00000624822 A0A087WVE0 104 aa4.89□□□□□ -1.63
LINC01560-202ENST00000624822 M0R2T5 61 aa4.88□□□□□ -1.63
LINC01560-202ENST00000624822 SPINK7P58062 85 aa4.88□□□□□ -1.63
LINC01560-202ENST00000624822 MT1HP80294 61 aa4.88□□□□□ -1.63
LINC01560-202ENST00000624822 RBM12B-AS1Q9P1G2 102 aa4.88□□□□□ -1.63
LINC01560-202ENST00000624822 HRES1P13985 223 aa4.86□□□□□ -1.63
LINC01560-202ENST00000624822 ATOX1O00244 68 aa4.84□□□□□ -1.63
LINC01560-202ENST00000624822 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
LINC01560-202ENST00000624822 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms