RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 UBE2D2P62837 147 aa-0.54□□□□□ -2.5
CDKL5-207ENST00000624700 PP6455Q8WZ26 134 aa-0.54□□□□□ -2.5
CDKL5-207ENST00000624700 CDKN2A-AS1Q9UH64 79 aa-0.54□□□□□ -2.5
CDKL5-207ENST00000624700 LOC100130705A0A1B0GUX0 176 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 H3BNG1 76 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 COX6CP09669 75 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 ATP5EP56381 51 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 S100A12P80511 92 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 Q56UQ5 140 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 FXYD6Q9H0Q3 95 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 FAIMQ9NVQ4 179 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 UQCR10Q9UDW1 63 aa-0.55□□□□□ -2.5
CDKL5-207ENST00000624700 UBE2L5PA0A1B0GUS4 154 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 UBE2L3P68036 154 aaKnown RBP-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 NMSQ5H8A3 153 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 MEIG1Q5JSS6 88 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 C9orf153Q5TBE3 101 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 WFDC13Q8IUB5 93 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 FAM223AQ8IWN6 122 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 MYH4Q9Y623 1939 aa-0.56□□□□□ -2.5
CDKL5-207ENST00000624700 A0A0G2JND7 137 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 A0A1B0GU69 56 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 A0A1B0GWA3 101 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 DEFB108AA8MXU0 73 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 MIF4GDA9UHW6 222 aaKnown RBP-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 H7BZZ5 65 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 APOC2P02655 101 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 SEC11AP67812 179 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 PRLHP81277 87 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 C1orf54Q8WWF1 131 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 TSC22D3Q99576 134 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 PRO1854Q9UHT4 67 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 ARL2-SNX15V9GYD0 113 aa-0.57□□□□□ -2.5
CDKL5-207ENST00000624700 GCC2Q8IWJ2 1684 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 SPTY2D1-AS1A0A0U1RR47 76 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 FAM223BA6NKX1 122 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 H0Y9P7 68 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 H3BQF6 201 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 CHKB-CPT1BH3BT56 60 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 MPC2O95563 127 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 ARMS2P0C7Q2 107 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 HMGN3Q15651 99 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 PSMG4Q5JS54 123 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 ALKAL2Q6UX46 152 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 C6orf201Q7Z4U5 140 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 LCN9Q8WX39 176 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 CGREF1Q99674 301 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 LINC00474Q9P2X8 69 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 IER3IP1Q9Y5U9 82 aa-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 ROCK2O75116 1388 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-207ENST00000624700 TRBV25-1A0A075B6N4 114 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 TRAV30A0A087WSZ9 112 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 C20orf202A1L168 122 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 NAP1L6A6NFF2 107 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 GNG7O60262 68 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 C3orf79P0CE67 100 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 Q0VG73 95 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 DEFB110Q30KQ9 67 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 TSLPQ969D9 159 aa-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 KTN1Q86UP2 1357 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-207ENST00000624700 TRBV7-7A0A0K0K1E9 115 aa-0.6□□□□□ -2.51
CDKL5-207ENST00000624700 NDUFC1O43677 76 aa-0.6□□□□□ -2.51
CDKL5-207ENST00000624700 SNCAP37840 140 aa-0.6□□□□□ -2.51
CDKL5-207ENST00000624700 KRTDAPP60985 99 aa-0.6□□□□□ -2.51
CDKL5-207ENST00000624700 C12orf57Q99622 126 aa-0.6□□□□□ -2.51
CDKL5-207ENST00000624700 A0A087WVE0 104 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 C7orf77A4D0Y5 90 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 FAM24AA6NFZ4 105 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 A8MTW9 85 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 OOSP1A8MZH6 123 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 TMEM262E9PQX1 116 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 K7EP13 123 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 NDUFA2O43678 99 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 TRAPPC2P0DI81 140 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 TRAPPC2BP0DI82 140 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 CATR1Q13166 79 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 PSENENQ9NZ42 101 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 CACFD1Q9UGQ2 172 aa-0.61□□□□□ -2.51
CDKL5-207ENST00000624700 HMGA1P17096 107 aaKnown RBP-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 COX7BP24311 80 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 GNG11P61952 73 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 DEFB136Q30KP8 78 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 SFTA2Q6UW10 78 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 HEPN1Q6WQI6 88 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 VAMP8Q9BV40 100 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 MANBALQ9NQG1 85 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 AP4S1Q9Y587 144 aa-0.62□□□□□ -2.51
CDKL5-207ENST00000624700 NDUFA3O95167 84 aa-0.63□□□□□ -2.51
CDKL5-207ENST00000624700 RPL38P63173 70 aaKnown RBP-0.63□□□□□ -2.51
CDKL5-207ENST00000624700 PMCHL1Q16048 86 aa-0.63□□□□□ -2.51
CDKL5-207ENST00000624700 CLPSL2Q6UWE3 100 aa-0.63□□□□□ -2.51
CDKL5-207ENST00000624700 TRGV9Q99603 122 aa-0.63□□□□□ -2.51
CDKL5-207ENST00000624700 ANKARQ7Z5J8 1434 aa-0.64□□□□□ -2.51
CDKL5-207ENST00000624700 MMP24-AS1A0A0U1RRL7 71 aa-0.64□□□□□ -2.51
CDKL5-207ENST00000624700 F8WEM9 126 aa-0.64□□□□□ -2.51
CDKL5-207ENST00000624700 H3BSH0 61 aa-0.64□□□□□ -2.51
CDKL5-207ENST00000624700 TNP1P09430 55 aa-0.64□□□□□ -2.51
CDKL5-207ENST00000624700 AKAIN1P0CW23 69 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms