RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 SPINK7P58062 85 aa3.47□□□□□ -1.85
ERCC6-213ENST00000624341 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
ERCC6-213ENST00000624341 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.85
ERCC6-213ENST00000624341 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.85
ERCC6-213ENST00000624341 NIPBLQ6KC79 2804 aaeCLIP3.46□□□□□ -1.86
ERCC6-213ENST00000624341 LRBAP50851 2863 aa3.45□□□□□ -1.86
ERCC6-213ENST00000624341 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
ERCC6-213ENST00000624341 A0A1B0GU33 70 aa3.45□□□□□ -1.86
ERCC6-213ENST00000624341 TNP2Q05952 138 aa3.45□□□□□ -1.86
ERCC6-213ENST00000624341 NSD1Q96L73 2696 aaPredicted RBP3.44□□□□□ -1.86
ERCC6-213ENST00000624341 Q5VSD8 79 aa3.44□□□□□ -1.86
ERCC6-213ENST00000624341 KRTAP26-1Q6PEX3 210 aa3.44□□□□□ -1.86
ERCC6-213ENST00000624341 ZNF469Q96JG9 3925 aaPredicted RBP3.43□□□□□ -1.86
ERCC6-213ENST00000624341 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
ERCC6-213ENST00000624341 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
ERCC6-213ENST00000624341 SPRR1BP22528 89 aa3.42□□□□□ -1.86
ERCC6-213ENST00000624341 ANK2Q01484 3957 aa3.42□□□□□ -1.86
ERCC6-213ENST00000624341 Q5W150 140 aa3.42□□□□□ -1.86
ERCC6-213ENST00000624341 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
ERCC6-213ENST00000624341 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
ERCC6-213ENST00000624341 H3BS24 57 aa3.4□□□□□ -1.86
ERCC6-213ENST00000624341 NF1P21359 2839 aa3.39□□□□□ -1.87
ERCC6-213ENST00000624341 PLAC8Q9NZF1 115 aa3.39□□□□□ -1.87
ERCC6-213ENST00000624341 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
ERCC6-213ENST00000624341 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
ERCC6-213ENST00000624341 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
ERCC6-213ENST00000624341 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
ERCC6-213ENST00000624341 CUBNO60494 3623 aa3.36□□□□□ -1.87
ERCC6-213ENST00000624341 DNHD1Q96M86 4753 aa3.35□□□□□ -1.87
ERCC6-213ENST00000624341 PANO1I0J062 215 aa3.35□□□□□ -1.87
ERCC6-213ENST00000624341 DMAC1Q96GE9 116 aa3.35□□□□□ -1.87
ERCC6-213ENST00000624341 FBN1P35555 2871 aaKnown RBP3.34□□□□□ -1.87
ERCC6-213ENST00000624341 Q6ZR54 194 aa3.34□□□□□ -1.87
ERCC6-213ENST00000624341 A0A087X002 238 aa3.33□□□□□ -1.88
ERCC6-213ENST00000624341 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
ERCC6-213ENST00000624341 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
ERCC6-213ENST00000624341 R4GN34 69 aa3.33□□□□□ -1.88
ERCC6-213ENST00000624341 A8MU10 97 aa3.32□□□□□ -1.88
ERCC6-213ENST00000624341 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
ERCC6-213ENST00000624341 S4R3F8 94 aa3.31□□□□□ -1.88
ERCC6-213ENST00000624341 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
ERCC6-213ENST00000624341 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
ERCC6-213ENST00000624341 ZANQ9Y493 2812 aa3.3□□□□□ -1.88
ERCC6-213ENST00000624341 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
ERCC6-213ENST00000624341 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
ERCC6-213ENST00000624341 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
ERCC6-213ENST00000624341 LCE6AA0A183 80 aa3.29□□□□□ -1.88
ERCC6-213ENST00000624341 KRTAP10-2P60368 255 aa3.29□□□□□ -1.88
ERCC6-213ENST00000624341 MXRA5Q9NR99 2828 aa3.28□□□□□ -1.88
ERCC6-213ENST00000624341 A6NN06 94 aa3.28□□□□□ -1.88
ERCC6-213ENST00000624341 KRTAP10-1P60331 282 aa3.28□□□□□ -1.88
ERCC6-213ENST00000624341 ROMO1P60602 79 aa3.28□□□□□ -1.88
ERCC6-213ENST00000624341 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
ERCC6-213ENST00000624341 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
ERCC6-213ENST00000624341 M0QZ58 72 aa3.22□□□□□ -1.89
ERCC6-213ENST00000624341 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
ERCC6-213ENST00000624341 TRRAPQ9Y4A5 3859 aa3.21□□□□□ -1.9
ERCC6-213ENST00000624341 COL7A1Q02388 2944 aa3.21□□□□□ -1.9
ERCC6-213ENST00000624341 CSMD3Q7Z407 3707 aa3.2□□□□□ -1.9
ERCC6-213ENST00000624341 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
ERCC6-213ENST00000624341 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
ERCC6-213ENST00000624341 KRTAP13-1Q8IUC0 172 aa3.19□□□□□ -1.9
ERCC6-213ENST00000624341 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
ERCC6-213ENST00000624341 TENM3Q9P273 2699 aa3.17□□□□□ -1.9
ERCC6-213ENST00000624341 LYSTQ99698 3801 aa3.16□□□□□ -1.9
ERCC6-213ENST00000624341 PRKDCP78527 4128 aaKnown RBP3.15□□□□□ -1.9
ERCC6-213ENST00000624341 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
ERCC6-213ENST00000624341 DNAH9Q9NYC9 4486 aa3.14□□□□□ -1.91
ERCC6-213ENST00000624341 ALMS1Q8TCU4 4167 aa3.14□□□□□ -1.91
ERCC6-213ENST00000624341 MEGF8Q7Z7M0 2845 aa3.13□□□□□ -1.91
ERCC6-213ENST00000624341 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
ERCC6-213ENST00000624341 KRTAP16-1A8MUX0 517 aa3.13□□□□□ -1.91
ERCC6-213ENST00000624341 P0C880 135 aa3.12□□□□□ -1.91
ERCC6-213ENST00000624341 C20orf166-AS1Q96NR2 134 aa3.1□□□□□ -1.91
ERCC6-213ENST00000624341 TENM1Q9UKZ4 2725 aa3.1□□□□□ -1.91
ERCC6-213ENST00000624341 VWFP04275 2813 aa3.1□□□□□ -1.91
ERCC6-213ENST00000624341 A8MUU9 505 aa3.1□□□□□ -1.91
ERCC6-213ENST00000624341 RPS29P62273 56 aaKnown RBP3.09□□□□□ -1.91
ERCC6-213ENST00000624341 HUWE1Q7Z6Z7 4374 aaKnown RBP3.09□□□□□ -1.91
ERCC6-213ENST00000624341 DNAH1Q9P2D7 4330 aa3.08□□□□□ -1.92
ERCC6-213ENST00000624341 DNAH7Q8WXX0 4024 aa3.08□□□□□ -1.92
ERCC6-213ENST00000624341 PKD1L1Q8TDX9 2849 aa3.07□□□□□ -1.92
ERCC6-213ENST00000624341 TGP01266 2768 aa3.06□□□□□ -1.92
ERCC6-213ENST00000624341 SRRM2Q9UQ35 2752 aaKnown RBP3.06□□□□□ -1.92
ERCC6-213ENST00000624341 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
ERCC6-213ENST00000624341 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
ERCC6-213ENST00000624341 H0YAA0 97 aa3.03□□□□□ -1.92
ERCC6-213ENST00000624341 TNP1P09430 55 aa3.02□□□□□ -1.93
ERCC6-213ENST00000624341 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
ERCC6-213ENST00000624341 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
ERCC6-213ENST00000624341 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
ERCC6-213ENST00000624341 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
ERCC6-213ENST00000624341 TENM2Q9NT68 2774 aa2.99□□□□□ -1.93
ERCC6-213ENST00000624341 RYR2Q92736 4967 aa2.98□□□□□ -1.93
ERCC6-213ENST00000624341 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
ERCC6-213ENST00000624341 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
ERCC6-213ENST00000624341 RYR3Q15413 4870 aa2.96□□□□□ -1.94
ERCC6-213ENST00000624341 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
ERCC6-213ENST00000624341 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
ERCC6-213ENST00000624341 XP32Q5T750 250 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms