RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 PRO1933Q9H354 126 aa-0.06□□□□□ -2.42
ERCC6-212ENST00000623788 LINC00472Q9H8W2 130 aa-0.06□□□□□ -2.42
ERCC6-212ENST00000623788 NPVFQ9HCQ7 196 aa-0.06□□□□□ -2.42
ERCC6-212ENST00000623788 DOCK1Q14185 1865 aa-0.06□□□□□ -2.42
ERCC6-212ENST00000623788 MYH6P13533 1939 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SPEF2Q9C093 1822 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 TRBV7-3A0A075B6L6 115 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 TRBV25-1A0A075B6N4 114 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 TRAV30A0A087WSZ9 112 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 TRAV13-2A0A0B4J235 113 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 PIGBOS1A0A0B4J2F0 54 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 LOC100130705A0A1B0GUX0 176 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 PVALEFA0A1B0GWK0 134 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 IGLC7A0M8Q6 106 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 FAM24AA6NFZ4 105 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 CRYM-AS1A6NIL9 109 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 A6NIN4 97 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SNRPGP15A8MWD9 76 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 HCG22E2RYF7 251 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 K7EIM0 57 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 M0QZ58 72 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 M0R129 80 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 M0R135 149 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 CORTO00230 105 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 NDUFA1O15239 70 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 GNG7O60262 68 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SNAPC5O75971 98 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 CFDP00746 253 aaPredicted RBP-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 HMGN2P05204 90 aaKnown RBP-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SAA2P0DJI9 122 aaPredicted RBP-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SPRR1AP35321 89 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 S100A10P60903 97 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 C9orf153Q5TBE3 101 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 CFAP126Q5VTH2 177 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 NCBP2-AS2Q69YL0 99 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 COMMD6Q7Z4G1 85 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 BAGE3Q86Y29 109 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 FAM213BQ8TBF2 198 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 LSM10Q969L4 123 aaKnown RBP-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 CGREF1Q99674 301 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 DPY30Q9C005 99 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 SERP1Q9Y6X1 66 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 S4R3F8 94 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 ARL2-SNX15V9GYD0 113 aa-0.07□□□□□ -2.42
ERCC6-212ENST00000623788 DOCK11Q5JSL3 2073 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 IGLV5-48A0A075B6I7 105 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TRBV6-1A0A0K0K1D8 114 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TRBV7-7A0A0K0K1E9 115 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 A0A1B0GWA3 101 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 EFCAB10A6NFE3 127 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 NDUFC1O43677 76 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 MT-ATP8P03928 68 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TNP1P09430 55 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 IGLC1P0CG04 106 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TRAPPC2P0DI81 140 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TRAPPC2BP0DI82 140 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SNCAP37840 140 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 RBP2P50120 134 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SNRPGP62308 76 aaKnown RBP-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 WT1-ASQ06250 92 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SPAG11BQ08648 103 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 COX17Q14061 63 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 CCDC58Q4VC31 144 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 RPL39P5Q59GN2 51 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 NMSQ5H8A3 153 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 RPL7L1Q6DKI1 246 aaKnown RBP-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 C5orf38Q86SI9 138 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 C8orf59Q8N0T1 100 aaPredicted RBP-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SMIM4Q8WVI0 70 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 PP6455Q8WZ26 134 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 ARHGAP5-AS1Q96IT6 56 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 PPP3R2Q96LZ3 170 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TSC22D3Q99576 134 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 PDCD10Q9BUL8 212 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SPANXDQ9BXN6 97 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 KCNQ1DNQ9H478 68 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 CDC42SE2Q9NRR3 84 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 NDUFA4L2Q9NRX3 87 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 SCN3BQ9NY72 215 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 ABRACLQ9P1F3 81 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 C6orf48Q9UBA6 75 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 R4GMQ9 66 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 PDCD11Q14690 1871 aaKnown RBP-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 PSME4Q14997 1843 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 KIF20BQ96Q89 1820 aa-0.08□□□□□ -2.42
ERCC6-212ENST00000623788 TRAV21A0A0B4J279 112 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 MMP24-AS1A0A0U1RRL7 71 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 ETDCA0A1B0GVM5 59 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 CPSF4LA6NMK7 179 aaKnown RBP-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 MIF4GDA9UHW6 222 aaKnown RBP-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 D6R8Y8 96 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 F8VRH5 84 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 H3BQF6 201 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 M0QY20 66 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 HMGN4O00479 90 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 SNCGO76070 127 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 PPP1R17O96001 155 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 APOC2P02655 101 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 SMIM6P0DI80 62 aa-0.09□□□□□ -2.42
ERCC6-212ENST00000623788 IAPPP10997 89 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms