RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
SIRPA-204ENST00000622179 K7ERS5 55 aa7.9□□□□□ -1.14
SIRPA-204ENST00000622179 TGP01266 2768 aa7.9□□□□□ -1.14
SIRPA-204ENST00000622179 LINC00483Q53H64 154 aa7.89□□□□□ -1.15
SIRPA-204ENST00000622179 Q1T7F1 81 aa7.89□□□□□ -1.15
SIRPA-204ENST00000622179 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
SIRPA-204ENST00000622179 Q8N1X5 172 aa7.86□□□□□ -1.15
SIRPA-204ENST00000622179 A0A087X002 238 aa7.85□□□□□ -1.15
SIRPA-204ENST00000622179 ATP11AUNQ6ZP68 121 aa7.85□□□□□ -1.15
SIRPA-204ENST00000622179 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
SIRPA-204ENST00000622179 HRES1P13985 223 aa7.85□□□□□ -1.15
SIRPA-204ENST00000622179 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
SIRPA-204ENST00000622179 KRTAP13-1Q8IUC0 172 aa7.83□□□□□ -1.16
SIRPA-204ENST00000622179 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
SIRPA-204ENST00000622179 Q5W150 140 aa7.78□□□□□ -1.16
SIRPA-204ENST00000622179 UQCR11O14957 56 aa7.76□□□□□ -1.17
SIRPA-204ENST00000622179 LCE6AA0A183 80 aa7.74□□□□□ -1.17
SIRPA-204ENST00000622179 Q5VV11 94 aa7.72□□□□□ -1.17
SIRPA-204ENST00000622179 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.17
SIRPA-204ENST00000622179 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
SIRPA-204ENST00000622179 CDC42SE1Q9NRR8 79 aa7.69□□□□□ -1.18
SIRPA-204ENST00000622179 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
SIRPA-204ENST00000622179 Q75L30 129 aa7.67□□□□□ -1.18
SIRPA-204ENST00000622179 SRRM2Q9UQ35 2752 aaKnown RBP7.66□□□□□ -1.18
SIRPA-204ENST00000622179 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
SIRPA-204ENST00000622179 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
SIRPA-204ENST00000622179 SPINK7P58062 85 aa7.62□□□□□ -1.19
SIRPA-204ENST00000622179 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
SIRPA-204ENST00000622179 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
SIRPA-204ENST00000622179 ASB16-AS1Q495Z4 193 aa7.56□□□□□ -1.2
SIRPA-204ENST00000622179 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
SIRPA-204ENST00000622179 J3QL48 77 aa7.52□□□□□ -1.21
SIRPA-204ENST00000622179 Q5VSD8 79 aa7.5□□□□□ -1.21
SIRPA-204ENST00000622179 A8MU10 97 aa7.48□□□□□ -1.21
SIRPA-204ENST00000622179 A0A0D9SG42 100 aa7.48□□□□□ -1.21
SIRPA-204ENST00000622179 LCA10Q71F78 164 aa7.48□□□□□ -1.21
SIRPA-204ENST00000622179 CSMD3Q7Z407 3707 aa7.48□□□□□ -1.21
SIRPA-204ENST00000622179 Q6ZSA8 131 aa7.47□□□□□ -1.21
SIRPA-204ENST00000622179 A0A1B0GU33 70 aa7.46□□□□□ -1.22
SIRPA-204ENST00000622179 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.22
SIRPA-204ENST00000622179 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
SIRPA-204ENST00000622179 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
SIRPA-204ENST00000622179 COL7A1Q02388 2944 aa7.4□□□□□ -1.22
SIRPA-204ENST00000622179 PRAC1Q96KF2 57 aa7.4□□□□□ -1.23
SIRPA-204ENST00000622179 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
SIRPA-204ENST00000622179 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
SIRPA-204ENST00000622179 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
SIRPA-204ENST00000622179 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
SIRPA-204ENST00000622179 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
SIRPA-204ENST00000622179 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
SIRPA-204ENST00000622179 S4R3F8 94 aa7.3□□□□□ -1.24
SIRPA-204ENST00000622179 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
SIRPA-204ENST00000622179 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
SIRPA-204ENST00000622179 H1FX-AS1Q4G0G2 97 aa7.22□□□□□ -1.25
SIRPA-204ENST00000622179 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
SIRPA-204ENST00000622179 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
SIRPA-204ENST00000622179 A6NN06 94 aa7.2□□□□□ -1.26
SIRPA-204ENST00000622179 A8MUU9 505 aa7.2□□□□□ -1.26
SIRPA-204ENST00000622179 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
SIRPA-204ENST00000622179 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
SIRPA-204ENST00000622179 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
SIRPA-204ENST00000622179 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
SIRPA-204ENST00000622179 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
SIRPA-204ENST00000622179 DNAH10Q8IVF4 4471 aa7.1□□□□□ -1.27
SIRPA-204ENST00000622179 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
SIRPA-204ENST00000622179 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
SIRPA-204ENST00000622179 R4GN34 69 aa7.05□□□□□ -1.28
SIRPA-204ENST00000622179 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
SIRPA-204ENST00000622179 ANK2Q01484 3957 aa7.01□□□□□ -1.29
SIRPA-204ENST00000622179 XP32Q5T750 250 aa7.01□□□□□ -1.29
SIRPA-204ENST00000622179 M0QZ58 72 aa6.99□□□□□ -1.29
SIRPA-204ENST00000622179 ROMO1P60602 79 aa6.99□□□□□ -1.29
SIRPA-204ENST00000622179 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
SIRPA-204ENST00000622179 DNAH1Q9P2D7 4330 aa6.95□□□□□ -1.3
SIRPA-204ENST00000622179 M0R2T5 61 aa6.92□□□□□ -1.3
SIRPA-204ENST00000622179 H0YAA0 97 aa6.91□□□□□ -1.3
SIRPA-204ENST00000622179 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
SIRPA-204ENST00000622179 STARD9Q9P2P6 4700 aa6.89□□□□□ -1.31
SIRPA-204ENST00000622179 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
SIRPA-204ENST00000622179 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
SIRPA-204ENST00000622179 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.31
SIRPA-204ENST00000622179 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
SIRPA-204ENST00000622179 VPS13DQ5THJ4 4388 aa6.82□□□□□ -1.32
SIRPA-204ENST00000622179 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
SIRPA-204ENST00000622179 LYSTQ99698 3801 aa6.8□□□□□ -1.32
SIRPA-204ENST00000622179 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
SIRPA-204ENST00000622179 P0C880 135 aa6.76□□□□□ -1.33
SIRPA-204ENST00000622179 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
SIRPA-204ENST00000622179 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
SIRPA-204ENST00000622179 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
SIRPA-204ENST00000622179 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
SIRPA-204ENST00000622179 DNAH17Q9UFH2 4485 aa6.72□□□□□ -1.33
SIRPA-204ENST00000622179 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
SIRPA-204ENST00000622179 LRP1BQ9NZR2 4599 aa6.66□□□□□ -1.34
SIRPA-204ENST00000622179 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
SIRPA-204ENST00000622179 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
SIRPA-204ENST00000622179 DNAH2Q9P225 4427 aa6.65□□□□□ -1.35
SIRPA-204ENST00000622179 H3BS24 57 aa6.64□□□□□ -1.35
SIRPA-204ENST00000622179 DNAH7Q8WXX0 4024 aa6.64□□□□□ -1.35
SIRPA-204ENST00000622179 FAT1Q14517 4588 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms