RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
NPHP4-211ENST00000622020 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
NPHP4-211ENST00000622020 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
NPHP4-211ENST00000622020 HRES1P13985 223 aa9.38□□□□□ -0.91
NPHP4-211ENST00000622020 A0A087WTM6 91 aa9.37□□□□□ -0.91
NPHP4-211ENST00000622020 RTL8CO15255 209 aa9.37□□□□□ -0.91
NPHP4-211ENST00000622020 ASB16-AS1Q495Z4 193 aa9.37□□□□□ -0.91
NPHP4-211ENST00000622020 Q5W150 140 aa9.37□□□□□ -0.91
NPHP4-211ENST00000622020 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 PRR26Q8N8Z3 221 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 A6NN06 94 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 Q6ZR54 194 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 MEGF8Q7Z7M0 2845 aa9.36□□□□□ -0.91
NPHP4-211ENST00000622020 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
NPHP4-211ENST00000622020 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
NPHP4-211ENST00000622020 SPINK7P58062 85 aa9.33□□□□□ -0.92
NPHP4-211ENST00000622020 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
NPHP4-211ENST00000622020 ZNF861PO60384 105 aa9.32□□□□□ -0.92
NPHP4-211ENST00000622020 CDC42SE1Q9NRR8 79 aa9.32□□□□□ -0.92
NPHP4-211ENST00000622020 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-211ENST00000622020 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
NPHP4-211ENST00000622020 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
NPHP4-211ENST00000622020 DNAH2Q9P225 4427 aa9.27□□□□□ -0.92
NPHP4-211ENST00000622020 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
NPHP4-211ENST00000622020 DYNC2H1Q8NCM8 4307 aaKnown RBP9.26□□□□□ -0.93
NPHP4-211ENST00000622020 PRKDCP78527 4128 aaKnown RBP9.24□□□□□ -0.93
NPHP4-211ENST00000622020 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
NPHP4-211ENST00000622020 VPS13DQ5THJ4 4388 aa9.23□□□□□ -0.93
NPHP4-211ENST00000622020 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
NPHP4-211ENST00000622020 DNAH6Q9C0G6 4158 aa9.21□□□□□ -0.93
NPHP4-211ENST00000622020 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
NPHP4-211ENST00000622020 PRAC1Q96KF2 57 aa9.17□□□□□ -0.94
NPHP4-211ENST00000622020 LY6G6CO95867 125 aa9.14□□□□□ -0.95
NPHP4-211ENST00000622020 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
NPHP4-211ENST00000622020 ACYP2P14621 99 aa9.13□□□□□ -0.95
NPHP4-211ENST00000622020 LINC00313P59037 77 aa9.13□□□□□ -0.95
NPHP4-211ENST00000622020 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
NPHP4-211ENST00000622020 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
NPHP4-211ENST00000622020 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
NPHP4-211ENST00000622020 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
NPHP4-211ENST00000622020 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
NPHP4-211ENST00000622020 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
NPHP4-211ENST00000622020 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
NPHP4-211ENST00000622020 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
NPHP4-211ENST00000622020 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
NPHP4-211ENST00000622020 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
NPHP4-211ENST00000622020 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
NPHP4-211ENST00000622020 A0A1B0GU69 56 aa9.03□□□□□ -0.96
NPHP4-211ENST00000622020 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
NPHP4-211ENST00000622020 C8orf87E5RJ46 101 aa9.02□□□□□ -0.97
NPHP4-211ENST00000622020 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
NPHP4-211ENST00000622020 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
NPHP4-211ENST00000622020 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
NPHP4-211ENST00000622020 SPINK1P00995 79 aa8.98□□□□□ -0.97
NPHP4-211ENST00000622020 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
NPHP4-211ENST00000622020 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
NPHP4-211ENST00000622020 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.98
NPHP4-211ENST00000622020 Q8N1X5 172 aa8.9□□□□□ -0.99
NPHP4-211ENST00000622020 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
NPHP4-211ENST00000622020 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
NPHP4-211ENST00000622020 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
NPHP4-211ENST00000622020 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
NPHP4-211ENST00000622020 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
NPHP4-211ENST00000622020 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
NPHP4-211ENST00000622020 KRTAP1-4P0C5Y4 121 aa8.84□□□□□ -0.99
NPHP4-211ENST00000622020 UQCR11O14957 56 aa8.83□□□□□ -1
NPHP4-211ENST00000622020 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
NPHP4-211ENST00000622020 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
NPHP4-211ENST00000622020 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
NPHP4-211ENST00000622020 PKD1P98161 4303 aa8.76□□□□□ -1.01
NPHP4-211ENST00000622020 C9orf92A6NGG3 77 aa8.75□□□□□ -1.01
NPHP4-211ENST00000622020 Q6ZSA8 131 aa8.74□□□□□ -1.01
NPHP4-211ENST00000622020 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
NPHP4-211ENST00000622020 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
NPHP4-211ENST00000622020 H3BS24 57 aa8.7□□□□□ -1.02
NPHP4-211ENST00000622020 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
NPHP4-211ENST00000622020 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
NPHP4-211ENST00000622020 FAT1Q14517 4588 aa8.61□□□□□ -1.03
NPHP4-211ENST00000622020 H0YAA0 97 aa8.55□□□□□ -1.04
NPHP4-211ENST00000622020 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
NPHP4-211ENST00000622020 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
NPHP4-211ENST00000622020 A0A1B0GU33 70 aa8.47□□□□□ -1.05
NPHP4-211ENST00000622020 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
NPHP4-211ENST00000622020 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
NPHP4-211ENST00000622020 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
NPHP4-211ENST00000622020 A8MUU9 505 aa8.41□□□□□ -1.06
NPHP4-211ENST00000622020 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
NPHP4-211ENST00000622020 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
NPHP4-211ENST00000622020 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
NPHP4-211ENST00000622020 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
NPHP4-211ENST00000622020 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
NPHP4-211ENST00000622020 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
NPHP4-211ENST00000622020 ROMO1P60602 79 aa8.3□□□□□ -1.08
NPHP4-211ENST00000622020 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
NPHP4-211ENST00000622020 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.09
NPHP4-211ENST00000622020 A0A0D9SG42 100 aa8.27□□□□□ -1.09
NPHP4-211ENST00000622020 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
NPHP4-211ENST00000622020 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
NPHP4-211ENST00000622020 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms