RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
SRGAP3-213ENST00000618999 LYSTQ99698 3801 aa4.32□□□□□ -1.72
SRGAP3-213ENST00000618999 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
SRGAP3-213ENST00000618999 MOBPQ13875 183 aa4.31□□□□□ -1.72
SRGAP3-213ENST00000618999 SPAG11AQ6PDA7 123 aa4.31□□□□□ -1.72
SRGAP3-213ENST00000618999 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
SRGAP3-213ENST00000618999 IGLV7-46A0A075B6I9 117 aa4.3□□□□□ -1.72
SRGAP3-213ENST00000618999 RTL8CO15255 209 aa4.3□□□□□ -1.72
SRGAP3-213ENST00000618999 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
SRGAP3-213ENST00000618999 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
SRGAP3-213ENST00000618999 LINC00472Q9H8W2 130 aa4.29□□□□□ -1.72
SRGAP3-213ENST00000618999 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
SRGAP3-213ENST00000618999 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
SRGAP3-213ENST00000618999 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
SRGAP3-213ENST00000618999 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
SRGAP3-213ENST00000618999 SPRR1BP22528 89 aa4.28□□□□□ -1.72
SRGAP3-213ENST00000618999 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
SRGAP3-213ENST00000618999 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
SRGAP3-213ENST00000618999 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
SRGAP3-213ENST00000618999 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
SRGAP3-213ENST00000618999 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
SRGAP3-213ENST00000618999 PANO1I0J062 215 aa4.26□□□□□ -1.73
SRGAP3-213ENST00000618999 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
SRGAP3-213ENST00000618999 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
SRGAP3-213ENST00000618999 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
SRGAP3-213ENST00000618999 A8MU10 97 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 KMT2AQ03164 3969 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 SPACA4Q8TDM5 124 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
SRGAP3-213ENST00000618999 ACYP2P14621 99 aa4.21□□□□□ -1.74
SRGAP3-213ENST00000618999 KRTAP11-1Q8IUC1 163 aa4.21□□□□□ -1.74
SRGAP3-213ENST00000618999 CIRBP-AS1Q8TBR5 109 aa4.2□□□□□ -1.74
SRGAP3-213ENST00000618999 DNAH2Q9P225 4427 aa4.2□□□□□ -1.74
SRGAP3-213ENST00000618999 HRES1P13985 223 aa4.19□□□□□ -1.74
SRGAP3-213ENST00000618999 PLAC8Q9NZF1 115 aa4.18□□□□□ -1.74
SRGAP3-213ENST00000618999 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 A0A1B0GU69 56 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 SPINK7P58062 85 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 LINC00313P59037 77 aa4.17□□□□□ -1.74
SRGAP3-213ENST00000618999 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
SRGAP3-213ENST00000618999 DNAH17Q9UFH2 4485 aa4.16□□□□□ -1.74
SRGAP3-213ENST00000618999 ZNF861PO60384 105 aa4.16□□□□□ -1.74
SRGAP3-213ENST00000618999 Q96NJ1 140 aa4.15□□□□□ -1.74
SRGAP3-213ENST00000618999 HYDINQ4G0P3 5121 aa4.15□□□□□ -1.74
SRGAP3-213ENST00000618999 ALMS1Q8TCU4 4167 aa4.15□□□□□ -1.75
SRGAP3-213ENST00000618999 A6NN06 94 aa4.15□□□□□ -1.75
SRGAP3-213ENST00000618999 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 Q8N1X5 172 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
SRGAP3-213ENST00000618999 A0A087X002 238 aa4.13□□□□□ -1.75
SRGAP3-213ENST00000618999 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
SRGAP3-213ENST00000618999 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
SRGAP3-213ENST00000618999 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
SRGAP3-213ENST00000618999 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
SRGAP3-213ENST00000618999 TYMSOSQ8TAI1 123 aa4.11□□□□□ -1.75
SRGAP3-213ENST00000618999 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
SRGAP3-213ENST00000618999 IGLV7-43P04211 117 aa4.11□□□□□ -1.75
SRGAP3-213ENST00000618999 K7ERS5 55 aa4.1□□□□□ -1.75
SRGAP3-213ENST00000618999 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
SRGAP3-213ENST00000618999 Q6ZSA8 131 aa4.1□□□□□ -1.75
SRGAP3-213ENST00000618999 UQCR11O14957 56 aa4.1□□□□□ -1.75
SRGAP3-213ENST00000618999 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
SRGAP3-213ENST00000618999 Q5W150 140 aa4.09□□□□□ -1.75
SRGAP3-213ENST00000618999 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.76
SRGAP3-213ENST00000618999 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.76
SRGAP3-213ENST00000618999 DNAH5Q8TE73 4624 aa4.08□□□□□ -1.76
SRGAP3-213ENST00000618999 HECTD4Q9Y4D8 3996 aa4.07□□□□□ -1.76
SRGAP3-213ENST00000618999 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
SRGAP3-213ENST00000618999 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
SRGAP3-213ENST00000618999 A0A1B0GVY2 172 aa4.06□□□□□ -1.76
SRGAP3-213ENST00000618999 SPINK1P00995 79 aa4.06□□□□□ -1.76
SRGAP3-213ENST00000618999 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
SRGAP3-213ENST00000618999 DNAH8Q96JB1 4490 aa4.05□□□□□ -1.76
SRGAP3-213ENST00000618999 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
SRGAP3-213ENST00000618999 RYR2Q92736 4967 aa4.04□□□□□ -1.76
SRGAP3-213ENST00000618999 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
SRGAP3-213ENST00000618999 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
SRGAP3-213ENST00000618999 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
SRGAP3-213ENST00000618999 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
SRGAP3-213ENST00000618999 PKD1P98161 4303 aa4.01□□□□□ -1.77
SRGAP3-213ENST00000618999 SPATA8Q6RVD6 105 aa4.01□□□□□ -1.77
SRGAP3-213ENST00000618999 PKHD1P08F94 4074 aa4□□□□□ -1.77
SRGAP3-213ENST00000618999 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
SRGAP3-213ENST00000618999 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
SRGAP3-213ENST00000618999 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
SRGAP3-213ENST00000618999 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
SRGAP3-213ENST00000618999 FAT1Q14517 4588 aa3.97□□□□□ -1.77
SRGAP3-213ENST00000618999 RYR3Q15413 4870 aa3.96□□□□□ -1.78
SRGAP3-213ENST00000618999 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
SRGAP3-213ENST00000618999 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
SRGAP3-213ENST00000618999 Q5VSD8 79 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms