RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
NEK3-209ENST00000618856 OBSCN-AS1Q96MR7 158 aa4.4□□□□□ -1.71
NEK3-209ENST00000618856 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
NEK3-209ENST00000618856 Q75L30 129 aa4.39□□□□□ -1.71
NEK3-209ENST00000618856 LOC110117498A0A087WWA1 95 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 A0A1B0GV72 72 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 C20orf166-AS1Q96NR2 134 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 DSCR8Q96T75 97 aa4.38□□□□□ -1.71
NEK3-209ENST00000618856 A0A1B0GW54 56 aa4.37□□□□□ -1.71
NEK3-209ENST00000618856 A0A1W2PPM0 123 aa4.37□□□□□ -1.71
NEK3-209ENST00000618856 A8MUU9 505 aa4.37□□□□□ -1.71
NEK3-209ENST00000618856 C9JAW5 83 aa4.37□□□□□ -1.71
NEK3-209ENST00000618856 BATFQ16520 125 aa4.37□□□□□ -1.71
NEK3-209ENST00000618856 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
NEK3-209ENST00000618856 Q6ZQT0 140 aa4.36□□□□□ -1.71
NEK3-209ENST00000618856 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
NEK3-209ENST00000618856 PDE6GP18545 87 aa4.35□□□□□ -1.71
NEK3-209ENST00000618856 H3BT86 120 aa4.34□□□□□ -1.71
NEK3-209ENST00000618856 IGKV4-1P06312 121 aa4.34□□□□□ -1.71
NEK3-209ENST00000618856 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
NEK3-209ENST00000618856 DSCR10P59022 87 aa4.32□□□□□ -1.72
NEK3-209ENST00000618856 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
NEK3-209ENST00000618856 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
NEK3-209ENST00000618856 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
NEK3-209ENST00000618856 SIGMAR1Q99720 223 aa4.32□□□□□ -1.72
NEK3-209ENST00000618856 J3KT08 172 aa4.31□□□□□ -1.72
NEK3-209ENST00000618856 LINC00313P59037 77 aa4.31□□□□□ -1.72
NEK3-209ENST00000618856 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
NEK3-209ENST00000618856 VPS25Q9BRG1 176 aa4.31□□□□□ -1.72
NEK3-209ENST00000618856 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
NEK3-209ENST00000618856 COL5A1-AS1Q5SY13 56 aa4.3□□□□□ -1.72
NEK3-209ENST00000618856 C14orf132Q9NPU4 83 aa4.3□□□□□ -1.72
NEK3-209ENST00000618856 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
NEK3-209ENST00000618856 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
NEK3-209ENST00000618856 MT1HP80294 61 aa4.28□□□□□ -1.72
NEK3-209ENST00000618856 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
NEK3-209ENST00000618856 IGHV6-1A0A0B4J1U7 121 aa4.27□□□□□ -1.73
NEK3-209ENST00000618856 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
NEK3-209ENST00000618856 A8MWP4 228 aa4.26□□□□□ -1.73
NEK3-209ENST00000618856 K7EP34 96 aa4.26□□□□□ -1.73
NEK3-209ENST00000618856 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
NEK3-209ENST00000618856 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
NEK3-209ENST00000618856 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
NEK3-209ENST00000618856 PCP4P48539 62 aa4.24□□□□□ -1.73
NEK3-209ENST00000618856 NREPQ16612 68 aa4.24□□□□□ -1.73
NEK3-209ENST00000618856 NDUFB1O75438 58 aa4.23□□□□□ -1.73
NEK3-209ENST00000618856 PRR15Q8IV56 129 aa4.23□□□□□ -1.73
NEK3-209ENST00000618856 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
NEK3-209ENST00000618856 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
NEK3-209ENST00000618856 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
NEK3-209ENST00000618856 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
NEK3-209ENST00000618856 F8W1H4 67 aa4.19□□□□□ -1.74
NEK3-209ENST00000618856 HRES1P13985 223 aa4.19□□□□□ -1.74
NEK3-209ENST00000618856 Q6ZVQ6 151 aa4.19□□□□□ -1.74
NEK3-209ENST00000618856 GTF2H5Q6ZYL4 71 aa4.19□□□□□ -1.74
NEK3-209ENST00000618856 ZCCHC13Q8WW36 166 aaKnown RBP4.19□□□□□ -1.74
NEK3-209ENST00000618856 K7EQZ3 153 aa4.18□□□□□ -1.74
NEK3-209ENST00000618856 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
NEK3-209ENST00000618856 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
NEK3-209ENST00000618856 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
NEK3-209ENST00000618856 BPY2O14599 106 aa4.17□□□□□ -1.74
NEK3-209ENST00000618856 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
NEK3-209ENST00000618856 LINC00846Q9NV44 126 aa4.17□□□□□ -1.74
NEK3-209ENST00000618856 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
NEK3-209ENST00000618856 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
NEK3-209ENST00000618856 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
NEK3-209ENST00000618856 SPINK7P58062 85 aa4.14□□□□□ -1.75
NEK3-209ENST00000618856 ETDBQ3ZM63 59 aa4.13□□□□□ -1.75
NEK3-209ENST00000618856 UBL5Q9BZL1 73 aa4.13□□□□□ -1.75
NEK3-209ENST00000618856 Q8N9L7 120 aa4.12□□□□□ -1.75
NEK3-209ENST00000618856 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
NEK3-209ENST00000618856 M0R2T5 61 aa4.11□□□□□ -1.75
NEK3-209ENST00000618856 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
NEK3-209ENST00000618856 CXCL6P80162 114 aa4.09□□□□□ -1.75
NEK3-209ENST00000618856 Q5W150 140 aa4.09□□□□□ -1.75
NEK3-209ENST00000618856 CASC2Q6XLA1 102 aa4.09□□□□□ -1.75
NEK3-209ENST00000618856 KRTAP9-8Q9BYQ0 159 aa4.09□□□□□ -1.75
NEK3-209ENST00000618856 USH2AO75445 5202 aa4.07□□□□□ -1.76
NEK3-209ENST00000618856 FAM240AA0A1B0GVK7 77 aa4.07□□□□□ -1.76
NEK3-209ENST00000618856 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
NEK3-209ENST00000618856 HCG22E2RYF7 251 aa4.06□□□□□ -1.76
NEK3-209ENST00000618856 ACYP1P07311 99 aa4.06□□□□□ -1.76
NEK3-209ENST00000618856 FAM236DA0A1B0GTK5 79 aa4.05□□□□□ -1.76
NEK3-209ENST00000618856 NDUFS5O43920 106 aa4.05□□□□□ -1.76
NEK3-209ENST00000618856 FAM236CP0DP71 79 aa4.05□□□□□ -1.76
NEK3-209ENST00000618856 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
NEK3-209ENST00000618856 A0A1B0GV90 55 aa4.02□□□□□ -1.77
NEK3-209ENST00000618856 MT2AP02795 61 aa4.02□□□□□ -1.77
NEK3-209ENST00000618856 C7orf65Q6ZTY9 151 aa4.02□□□□□ -1.77
NEK3-209ENST00000618856 TP53AIP1Q9HCN2 124 aa4.01□□□□□ -1.77
NEK3-209ENST00000618856 ATP5EP2Q5VTU8 51 aa4□□□□□ -1.77
NEK3-209ENST00000618856 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
NEK3-209ENST00000618856 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
NEK3-209ENST00000618856 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
NEK3-209ENST00000618856 MT1FP04733 61 aa3.98□□□□□ -1.77
NEK3-209ENST00000618856 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
NEK3-209ENST00000618856 LINC00643Q86TS7 51 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms