RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 M0R2T5 61 aa6.11□□□□□ -1.43
SMARCA1-205ENST00000617310 C1orf195Q5TG92 126 aa6.09□□□□□ -1.43
SMARCA1-205ENST00000617310 CD164Q04900 197 aa6.09□□□□□ -1.43
SMARCA1-205ENST00000617310 DNAH3Q8TD57 4116 aa6.09□□□□□ -1.43
SMARCA1-205ENST00000617310 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
SMARCA1-205ENST00000617310 A0A087X002 238 aa6.07□□□□□ -1.44
SMARCA1-205ENST00000617310 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
SMARCA1-205ENST00000617310 Q6ZRN7 208 aaPredicted RBP6.07□□□□□ -1.44
SMARCA1-205ENST00000617310 H7BZZ5 65 aa6.06□□□□□ -1.44
SMARCA1-205ENST00000617310 A0A0D9SG42 100 aa6.06□□□□□ -1.44
SMARCA1-205ENST00000617310 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
SMARCA1-205ENST00000617310 SPRR1BP22528 89 aa6.04□□□□□ -1.44
SMARCA1-205ENST00000617310 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
SMARCA1-205ENST00000617310 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
SMARCA1-205ENST00000617310 COL7A1Q02388 2944 aa6.02□□□□□ -1.45
SMARCA1-205ENST00000617310 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
SMARCA1-205ENST00000617310 KRTAP21-3Q3LHN1 58 aa6.01□□□□□ -1.45
SMARCA1-205ENST00000617310 HRES1P13985 223 aa6□□□□□ -1.45
SMARCA1-205ENST00000617310 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
SMARCA1-205ENST00000617310 KRTAP4-16G5E9R7 235 aaPredicted RBP5.99□□□□□ -1.45
SMARCA1-205ENST00000617310 UQCR11O14957 56 aa5.99□□□□□ -1.45
SMARCA1-205ENST00000617310 SPINK7P58062 85 aa5.99□□□□□ -1.45
SMARCA1-205ENST00000617310 ZCCHC13Q8WW36 166 aaKnown RBP5.98□□□□□ -1.45
SMARCA1-205ENST00000617310 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
SMARCA1-205ENST00000617310 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
SMARCA1-205ENST00000617310 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
SMARCA1-205ENST00000617310 Q5W150 140 aa5.93□□□□□ -1.46
SMARCA1-205ENST00000617310 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
SMARCA1-205ENST00000617310 CYP4F30PQ9H0H9 118 aa5.91□□□□□ -1.46
SMARCA1-205ENST00000617310 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
SMARCA1-205ENST00000617310 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.47
SMARCA1-205ENST00000617310 PRO0628Q9UI54 55 aa5.9□□□□□ -1.47
SMARCA1-205ENST00000617310 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
SMARCA1-205ENST00000617310 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
SMARCA1-205ENST00000617310 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
SMARCA1-205ENST00000617310 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SMARCA1-205ENST00000617310 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
SMARCA1-205ENST00000617310 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
SMARCA1-205ENST00000617310 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
SMARCA1-205ENST00000617310 DNAH10Q8IVF4 4471 aa5.83□□□□□ -1.48
SMARCA1-205ENST00000617310 S4R3F8 94 aa5.82□□□□□ -1.48
SMARCA1-205ENST00000617310 A0A1B0GU33 70 aa5.8□□□□□ -1.48
SMARCA1-205ENST00000617310 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
SMARCA1-205ENST00000617310 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
SMARCA1-205ENST00000617310 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
SMARCA1-205ENST00000617310 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
SMARCA1-205ENST00000617310 DYNC2H1Q8NCM8 4307 aaKnown RBP5.78□□□□□ -1.48
SMARCA1-205ENST00000617310 KRTAP13-1Q8IUC0 172 aa5.77□□□□□ -1.49
SMARCA1-205ENST00000617310 R4GN34 69 aa5.77□□□□□ -1.49
SMARCA1-205ENST00000617310 DNAH9Q9NYC9 4486 aa5.76□□□□□ -1.49
SMARCA1-205ENST00000617310 OXTP01178 125 aa5.76□□□□□ -1.49
SMARCA1-205ENST00000617310 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
SMARCA1-205ENST00000617310 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
SMARCA1-205ENST00000617310 M0QZ58 72 aa5.67□□□□□ -1.5
SMARCA1-205ENST00000617310 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
SMARCA1-205ENST00000617310 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
SMARCA1-205ENST00000617310 Q1T7F1 81 aa5.63□□□□□ -1.51
SMARCA1-205ENST00000617310 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
SMARCA1-205ENST00000617310 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
SMARCA1-205ENST00000617310 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
SMARCA1-205ENST00000617310 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
SMARCA1-205ENST00000617310 LCA10Q71F78 164 aa5.6□□□□□ -1.51
SMARCA1-205ENST00000617310 RPS29P62273 56 aaKnown RBP5.6□□□□□ -1.51
SMARCA1-205ENST00000617310 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
SMARCA1-205ENST00000617310 PRKDCP78527 4128 aaKnown RBP5.6□□□□□ -1.51
SMARCA1-205ENST00000617310 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
SMARCA1-205ENST00000617310 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
SMARCA1-205ENST00000617310 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
SMARCA1-205ENST00000617310 Q75L30 129 aa5.58□□□□□ -1.52
SMARCA1-205ENST00000617310 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
SMARCA1-205ENST00000617310 Q5VV11 94 aa5.56□□□□□ -1.52
SMARCA1-205ENST00000617310 Q5XG85 94 aa5.55□□□□□ -1.52
SMARCA1-205ENST00000617310 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
SMARCA1-205ENST00000617310 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
SMARCA1-205ENST00000617310 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
SMARCA1-205ENST00000617310 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
SMARCA1-205ENST00000617310 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
SMARCA1-205ENST00000617310 XP32Q5T750 250 aa5.49□□□□□ -1.53
SMARCA1-205ENST00000617310 A8MUU9 505 aa5.48□□□□□ -1.53
SMARCA1-205ENST00000617310 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
SMARCA1-205ENST00000617310 A0A1B0GVY2 172 aa5.46□□□□□ -1.54
SMARCA1-205ENST00000617310 VPS13DQ5THJ4 4388 aa5.46□□□□□ -1.54
SMARCA1-205ENST00000617310 A8MU10 97 aa5.46□□□□□ -1.54
SMARCA1-205ENST00000617310 DNHD1Q96M86 4753 aa5.45□□□□□ -1.54
SMARCA1-205ENST00000617310 FAT2Q9NYQ8 4349 aa5.44□□□□□ -1.54
SMARCA1-205ENST00000617310 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
SMARCA1-205ENST00000617310 STARD9Q9P2P6 4700 aa5.37□□□□□ -1.55
SMARCA1-205ENST00000617310 PLECQ15149 4684 aaKnown RBP5.37□□□□□ -1.55
SMARCA1-205ENST00000617310 DNAH17Q9UFH2 4485 aa5.36□□□□□ -1.55
SMARCA1-205ENST00000617310 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
SMARCA1-205ENST00000617310 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
SMARCA1-205ENST00000617310 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
SMARCA1-205ENST00000617310 ROMO1P60602 79 aa5.34□□□□□ -1.56
SMARCA1-205ENST00000617310 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.56
SMARCA1-205ENST00000617310 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
SMARCA1-205ENST00000617310 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SMARCA1-205ENST00000617310 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
SMARCA1-205ENST00000617310 PKD1P98161 4303 aa5.27□□□□□ -1.57
SMARCA1-205ENST00000617310 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
SMARCA1-205ENST00000617310 DNAH11Q96DT5 4516 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 895 ms