RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
CACNA1C-231ENST00000616390 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
CACNA1C-231ENST00000616390 LINC00208Q96KT6 92 aa8.4□□□□□ -1.06
CACNA1C-231ENST00000616390 A8MWP4 228 aa8.4□□□□□ -1.06
CACNA1C-231ENST00000616390 LCE6AA0A183 80 aa8.39□□□□□ -1.07
CACNA1C-231ENST00000616390 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
CACNA1C-231ENST00000616390 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
CACNA1C-231ENST00000616390 Q6ZR54 194 aa8.38□□□□□ -1.07
CACNA1C-231ENST00000616390 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
CACNA1C-231ENST00000616390 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
CACNA1C-231ENST00000616390 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
CACNA1C-231ENST00000616390 ZCCHC13Q8WW36 166 aaKnown RBP8.36□□□□□ -1.07
CACNA1C-231ENST00000616390 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
CACNA1C-231ENST00000616390 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
CACNA1C-231ENST00000616390 H0Y9P7 68 aa8.35□□□□□ -1.07
CACNA1C-231ENST00000616390 NDUFB1O75438 58 aa8.35□□□□□ -1.07
CACNA1C-231ENST00000616390 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
CACNA1C-231ENST00000616390 ZNF861PO60384 105 aa8.33□□□□□ -1.08
CACNA1C-231ENST00000616390 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
CACNA1C-231ENST00000616390 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
CACNA1C-231ENST00000616390 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
CACNA1C-231ENST00000616390 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
CACNA1C-231ENST00000616390 Q96NJ1 140 aa8.31□□□□□ -1.08
CACNA1C-231ENST00000616390 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
CACNA1C-231ENST00000616390 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
CACNA1C-231ENST00000616390 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
CACNA1C-231ENST00000616390 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
CACNA1C-231ENST00000616390 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
CACNA1C-231ENST00000616390 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
CACNA1C-231ENST00000616390 A0A087X002 238 aa8.25□□□□□ -1.09
CACNA1C-231ENST00000616390 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
CACNA1C-231ENST00000616390 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
CACNA1C-231ENST00000616390 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
CACNA1C-231ENST00000616390 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
CACNA1C-231ENST00000616390 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
CACNA1C-231ENST00000616390 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.1
CACNA1C-231ENST00000616390 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
CACNA1C-231ENST00000616390 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
CACNA1C-231ENST00000616390 H3BPC8 53 aa8.16□□□□□ -1.1
CACNA1C-231ENST00000616390 ROMO1P60602 79 aa8.15□□□□□ -1.1
CACNA1C-231ENST00000616390 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
CACNA1C-231ENST00000616390 KRTAP10-1P60331 282 aa8.15□□□□□ -1.11
CACNA1C-231ENST00000616390 SPINK7P58062 85 aa8.13□□□□□ -1.11
CACNA1C-231ENST00000616390 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
CACNA1C-231ENST00000616390 CSAG1Q6PB30 78 aa8.12□□□□□ -1.11
CACNA1C-231ENST00000616390 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
CACNA1C-231ENST00000616390 PKD1P98161 4303 aa8.1□□□□□ -1.11
CACNA1C-231ENST00000616390 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
CACNA1C-231ENST00000616390 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
CACNA1C-231ENST00000616390 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
CACNA1C-231ENST00000616390 Q5W150 140 aa8.07□□□□□ -1.12
CACNA1C-231ENST00000616390 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
CACNA1C-231ENST00000616390 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
CACNA1C-231ENST00000616390 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
CACNA1C-231ENST00000616390 COA5Q86WW8 74 aa8.05□□□□□ -1.12
CACNA1C-231ENST00000616390 FAT2Q9NYQ8 4349 aa8.04□□□□□ -1.12
CACNA1C-231ENST00000616390 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
CACNA1C-231ENST00000616390 Q6ZSA8 131 aa8.01□□□□□ -1.13
CACNA1C-231ENST00000616390 J3QL48 77 aa8□□□□□ -1.13
CACNA1C-231ENST00000616390 PKHD1P08F94 4074 aa8□□□□□ -1.13
CACNA1C-231ENST00000616390 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
CACNA1C-231ENST00000616390 SPAG11AQ6PDA7 123 aa7.98□□□□□ -1.13
CACNA1C-231ENST00000616390 P0C880 135 aa7.96□□□□□ -1.13
CACNA1C-231ENST00000616390 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.14
CACNA1C-231ENST00000616390 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
CACNA1C-231ENST00000616390 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
CACNA1C-231ENST00000616390 HRES1P13985 223 aa7.94□□□□□ -1.14
CACNA1C-231ENST00000616390 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
CACNA1C-231ENST00000616390 KRTAP13-3Q3SY46 172 aa7.91□□□□□ -1.14
CACNA1C-231ENST00000616390 IGKV2D-30A0A075B6S6 120 aa7.85□□□□□ -1.15
CACNA1C-231ENST00000616390 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
CACNA1C-231ENST00000616390 IGKV2-30P06310 120 aa7.85□□□□□ -1.15
CACNA1C-231ENST00000616390 SACSQ9NZJ4 4579 aa7.83□□□□□ -1.16
CACNA1C-231ENST00000616390 ACYP2P14621 99 aa7.8□□□□□ -1.16
CACNA1C-231ENST00000616390 SPINK1P00995 79 aa7.79□□□□□ -1.16
CACNA1C-231ENST00000616390 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
CACNA1C-231ENST00000616390 FAT1Q14517 4588 aa7.78□□□□□ -1.16
CACNA1C-231ENST00000616390 DYNC1H1Q14204 4646 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-231ENST00000616390 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
CACNA1C-231ENST00000616390 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
CACNA1C-231ENST00000616390 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
CACNA1C-231ENST00000616390 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
CACNA1C-231ENST00000616390 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
CACNA1C-231ENST00000616390 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
CACNA1C-231ENST00000616390 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
CACNA1C-231ENST00000616390 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
CACNA1C-231ENST00000616390 Q8N1X5 172 aa7.67□□□□□ -1.18
CACNA1C-231ENST00000616390 KMT2CQ8NEZ4 4911 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-231ENST00000616390 A0A1B0GVY2 172 aa7.65□□□□□ -1.19
CACNA1C-231ENST00000616390 APOBP04114 4563 aaKnown RBP7.64□□□□□ -1.19
CACNA1C-231ENST00000616390 A0A1B0GU69 56 aa7.61□□□□□ -1.19
CACNA1C-231ENST00000616390 A8MUU9 505 aa7.61□□□□□ -1.19
CACNA1C-231ENST00000616390 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-231ENST00000616390 RYR2Q92736 4967 aa7.57□□□□□ -1.2
CACNA1C-231ENST00000616390 K7ERS5 55 aa7.57□□□□□ -1.2
CACNA1C-231ENST00000616390 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-231ENST00000616390 UQCR11O14957 56 aa7.55□□□□□ -1.2
CACNA1C-231ENST00000616390 FLG2Q5D862 2391 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-231ENST00000616390 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-231ENST00000616390 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms