RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
LMO3-235ENST00000616247 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
LMO3-235ENST00000616247 A0A1B0GU69 56 aa4.05□□□□□ -1.76
LMO3-235ENST00000616247 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
LMO3-235ENST00000616247 FAM229AH3BQW9 127 aa4.04□□□□□ -1.76
LMO3-235ENST00000616247 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
LMO3-235ENST00000616247 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
LMO3-235ENST00000616247 PANO1I0J062 215 aa4.03□□□□□ -1.76
LMO3-235ENST00000616247 ACYP2P14621 99 aa4.03□□□□□ -1.76
LMO3-235ENST00000616247 C14orf177Q52M58 125 aa4.03□□□□□ -1.76
LMO3-235ENST00000616247 SPINK1P00995 79 aa4.02□□□□□ -1.77
LMO3-235ENST00000616247 SPRR1BP22528 89 aa4.02□□□□□ -1.77
LMO3-235ENST00000616247 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
LMO3-235ENST00000616247 Q5W150 140 aa4.02□□□□□ -1.77
LMO3-235ENST00000616247 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
LMO3-235ENST00000616247 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
LMO3-235ENST00000616247 Q6ZR54 194 aa4□□□□□ -1.77
LMO3-235ENST00000616247 Q96NJ1 140 aa4□□□□□ -1.77
LMO3-235ENST00000616247 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
LMO3-235ENST00000616247 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
LMO3-235ENST00000616247 KRTAP24-1Q3LI83 254 aa3.99□□□□□ -1.77
LMO3-235ENST00000616247 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
LMO3-235ENST00000616247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.99□□□□□ -1.77
LMO3-235ENST00000616247 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
LMO3-235ENST00000616247 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
LMO3-235ENST00000616247 PLAC8Q9NZF1 115 aa3.98□□□□□ -1.77
LMO3-235ENST00000616247 ANK2Q01484 3957 aa3.97□□□□□ -1.77
LMO3-235ENST00000616247 ZNF706Q9Y5V0 76 aaPredicted RBP3.97□□□□□ -1.77
LMO3-235ENST00000616247 RTL8CO15255 209 aa3.97□□□□□ -1.77
LMO3-235ENST00000616247 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
LMO3-235ENST00000616247 UQCR11O14957 56 aa3.96□□□□□ -1.78
LMO3-235ENST00000616247 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
LMO3-235ENST00000616247 WWC2-AS2Q96NR7 200 aa3.95□□□□□ -1.78
LMO3-235ENST00000616247 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
LMO3-235ENST00000616247 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
LMO3-235ENST00000616247 NBDYA0A0U1RRE5 68 aa3.93□□□□□ -1.78
LMO3-235ENST00000616247 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
LMO3-235ENST00000616247 TGP01266 2768 aa3.92□□□□□ -1.78
LMO3-235ENST00000616247 ZNF861PO60384 105 aa3.92□□□□□ -1.78
LMO3-235ENST00000616247 PLA2G1BP04054 148 aaKnown RBP3.92□□□□□ -1.78
LMO3-235ENST00000616247 KRTAP13-1Q8IUC0 172 aa3.92□□□□□ -1.78
LMO3-235ENST00000616247 DNAH10Q8IVF4 4471 aa3.92□□□□□ -1.78
LMO3-235ENST00000616247 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
LMO3-235ENST00000616247 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
LMO3-235ENST00000616247 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
LMO3-235ENST00000616247 DMAC1Q96GE9 116 aa3.9□□□□□ -1.78
LMO3-235ENST00000616247 APLNQ9ULZ1 77 aa3.9□□□□□ -1.78
LMO3-235ENST00000616247 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
LMO3-235ENST00000616247 IGLV5-52A0A0A0MRZ9 124 aa3.89□□□□□ -1.79
LMO3-235ENST00000616247 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
LMO3-235ENST00000616247 Q8N1X5 172 aa3.89□□□□□ -1.79
LMO3-235ENST00000616247 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
LMO3-235ENST00000616247 DNAH3Q8TD57 4116 aa3.88□□□□□ -1.79
LMO3-235ENST00000616247 LINC00483Q53H64 154 aa3.88□□□□□ -1.79
LMO3-235ENST00000616247 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
LMO3-235ENST00000616247 A0A087WTM6 91 aa3.87□□□□□ -1.79
LMO3-235ENST00000616247 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
LMO3-235ENST00000616247 C1orf134Q5TEV5 83 aa3.85□□□□□ -1.79
LMO3-235ENST00000616247 IGLV7-43P04211 117 aa3.85□□□□□ -1.79
LMO3-235ENST00000616247 KRTAP13-3Q3SY46 172 aa3.84□□□□□ -1.79
LMO3-235ENST00000616247 LYSTQ99698 3801 aa3.83□□□□□ -1.8
LMO3-235ENST00000616247 Q6ZRN7 208 aaPredicted RBP3.82□□□□□ -1.8
LMO3-235ENST00000616247 SSBP3-AS1Q7Z2R9 100 aa3.82□□□□□ -1.8
LMO3-235ENST00000616247 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
LMO3-235ENST00000616247 NUPR2A6NF83 97 aa3.8□□□□□ -1.8
LMO3-235ENST00000616247 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
LMO3-235ENST00000616247 LY6G6CO95867 125 aa3.79□□□□□ -1.8
LMO3-235ENST00000616247 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
LMO3-235ENST00000616247 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
LMO3-235ENST00000616247 MEGF8Q7Z7M0 2845 aa3.78□□□□□ -1.8
LMO3-235ENST00000616247 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
LMO3-235ENST00000616247 K7ERS5 55 aa3.76□□□□□ -1.81
LMO3-235ENST00000616247 A0A1B0GU33 70 aa3.76□□□□□ -1.81
LMO3-235ENST00000616247 C9orf92A6NGG3 77 aa3.75□□□□□ -1.81
LMO3-235ENST00000616247 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
LMO3-235ENST00000616247 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
LMO3-235ENST00000616247 Q6ZSA8 131 aa3.74□□□□□ -1.81
LMO3-235ENST00000616247 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
LMO3-235ENST00000616247 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
LMO3-235ENST00000616247 H0YAA0 97 aa3.73□□□□□ -1.81
LMO3-235ENST00000616247 LINC00304Q8N9R0 145 aa3.73□□□□□ -1.81
LMO3-235ENST00000616247 ROMO1P60602 79 aa3.72□□□□□ -1.81
LMO3-235ENST00000616247 DNAH1Q9P2D7 4330 aa3.72□□□□□ -1.81
LMO3-235ENST00000616247 DNAH7Q8WXX0 4024 aa3.72□□□□□ -1.81
LMO3-235ENST00000616247 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
LMO3-235ENST00000616247 KRTAP10-2P60368 255 aa3.71□□□□□ -1.82
LMO3-235ENST00000616247 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
LMO3-235ENST00000616247 A0A0D9SG42 100 aa3.71□□□□□ -1.82
LMO3-235ENST00000616247 FRAS1Q86XX4 4008 aa3.7□□□□□ -1.82
LMO3-235ENST00000616247 A8MUU9 505 aa3.7□□□□□ -1.82
LMO3-235ENST00000616247 DNAH8Q96JB1 4490 aa3.69□□□□□ -1.82
LMO3-235ENST00000616247 STARD9Q9P2P6 4700 aa3.69□□□□□ -1.82
LMO3-235ENST00000616247 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
LMO3-235ENST00000616247 PLECQ15149 4684 aaKnown RBP3.68□□□□□ -1.82
LMO3-235ENST00000616247 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
LMO3-235ENST00000616247 KRTAP10-1P60331 282 aa3.65□□□□□ -1.82
LMO3-235ENST00000616247 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.82
LMO3-235ENST00000616247 SMR3BP02814 79 aaPredicted RBP3.64□□□□□ -1.83
LMO3-235ENST00000616247 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
LMO3-235ENST00000616247 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms