RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NBPF19A0A087WUL8 3843 aa3.45□□□□□ -1.86
SYNCRIP-204ENST00000616122 A0A1B0GU69 56 aa3.44□□□□□ -1.86
SYNCRIP-204ENST00000616122 TYMSOSQ8TAI1 123 aa3.44□□□□□ -1.86
SYNCRIP-204ENST00000616122 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
SYNCRIP-204ENST00000616122 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
SYNCRIP-204ENST00000616122 CYP4F30PQ9H0H9 118 aa3.43□□□□□ -1.86
SYNCRIP-204ENST00000616122 Q5XG85 94 aa3.43□□□□□ -1.86
SYNCRIP-204ENST00000616122 A0A0D9SG42 100 aa3.42□□□□□ -1.86
SYNCRIP-204ENST00000616122 Q6ZRN7 208 aaPredicted RBP3.42□□□□□ -1.86
SYNCRIP-204ENST00000616122 KRTAP29-1A8MX34 341 aaPredicted RBP3.42□□□□□ -1.86
SYNCRIP-204ENST00000616122 PLAC8Q9NZF1 115 aa3.42□□□□□ -1.86
SYNCRIP-204ENST00000616122 PRR26Q8N8Z3 221 aa3.42□□□□□ -1.86
SYNCRIP-204ENST00000616122 COA5Q86WW8 74 aa3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 Q6ZR54 194 aa3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 LINC00313P59037 77 aa3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 ROMO1P60602 79 aa3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
SYNCRIP-204ENST00000616122 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
SYNCRIP-204ENST00000616122 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
SYNCRIP-204ENST00000616122 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
SYNCRIP-204ENST00000616122 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
SYNCRIP-204ENST00000616122 LCE6AA0A183 80 aa3.36□□□□□ -1.87
SYNCRIP-204ENST00000616122 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
SYNCRIP-204ENST00000616122 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
SYNCRIP-204ENST00000616122 CD164Q04900 197 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 BSNQ9UPA5 3926 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 Q1T7F1 81 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 Q75L30 129 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 A0A087X002 238 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 SPINK7P58062 85 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
SYNCRIP-204ENST00000616122 Q96NJ1 140 aa3.34□□□□□ -1.87
SYNCRIP-204ENST00000616122 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
SYNCRIP-204ENST00000616122 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
SYNCRIP-204ENST00000616122 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
SYNCRIP-204ENST00000616122 HRES1P13985 223 aa3.32□□□□□ -1.88
SYNCRIP-204ENST00000616122 Q5W150 140 aa3.31□□□□□ -1.88
SYNCRIP-204ENST00000616122 M0R2T5 61 aa3.31□□□□□ -1.88
SYNCRIP-204ENST00000616122 UQCR11O14957 56 aa3.29□□□□□ -1.88
SYNCRIP-204ENST00000616122 Q5VV11 94 aa3.29□□□□□ -1.88
SYNCRIP-204ENST00000616122 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
SYNCRIP-204ENST00000616122 Q8N1X5 172 aa3.28□□□□□ -1.88
SYNCRIP-204ENST00000616122 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
SYNCRIP-204ENST00000616122 VPS13CQ709C8 3753 aa3.27□□□□□ -1.89
SYNCRIP-204ENST00000616122 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
SYNCRIP-204ENST00000616122 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
SYNCRIP-204ENST00000616122 C20orf166-AS1Q96NR2 134 aa3.25□□□□□ -1.89
SYNCRIP-204ENST00000616122 ASB16-AS1Q495Z4 193 aa3.23□□□□□ -1.89
SYNCRIP-204ENST00000616122 ZNF469Q96JG9 3925 aaPredicted RBP3.23□□□□□ -1.89
SYNCRIP-204ENST00000616122 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
SYNCRIP-204ENST00000616122 A8MU10 97 aa3.23□□□□□ -1.89
SYNCRIP-204ENST00000616122 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
SYNCRIP-204ENST00000616122 LCA10Q71F78 164 aa3.22□□□□□ -1.89
SYNCRIP-204ENST00000616122 ANK3Q12955 4377 aaKnown RBP3.22□□□□□ -1.89
SYNCRIP-204ENST00000616122 Q6ZSA8 131 aa3.22□□□□□ -1.89
SYNCRIP-204ENST00000616122 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
SYNCRIP-204ENST00000616122 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
SYNCRIP-204ENST00000616122 Q5VSD8 79 aa3.16□□□□□ -1.9
SYNCRIP-204ENST00000616122 HYDINQ4G0P3 5121 aa3.16□□□□□ -1.9
SYNCRIP-204ENST00000616122 KIAA1109Q2LD37 5005 aa3.16□□□□□ -1.9
SYNCRIP-204ENST00000616122 A0A1B0GU33 70 aa3.15□□□□□ -1.91
SYNCRIP-204ENST00000616122 CSAG1Q6PB30 78 aa3.14□□□□□ -1.91
SYNCRIP-204ENST00000616122 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
SYNCRIP-204ENST00000616122 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
SYNCRIP-204ENST00000616122 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
SYNCRIP-204ENST00000616122 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
SYNCRIP-204ENST00000616122 RPS29P62273 56 aaKnown RBP3.11□□□□□ -1.91
SYNCRIP-204ENST00000616122 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
SYNCRIP-204ENST00000616122 RYR1P21817 5038 aa3.08□□□□□ -1.92
SYNCRIP-204ENST00000616122 A6NN06 94 aa3.08□□□□□ -1.92
SYNCRIP-204ENST00000616122 A8MUU9 505 aa3.08□□□□□ -1.92
SYNCRIP-204ENST00000616122 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
SYNCRIP-204ENST00000616122 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
SYNCRIP-204ENST00000616122 AKAP9Q99996 3911 aa3.02□□□□□ -1.93
SYNCRIP-204ENST00000616122 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
SYNCRIP-204ENST00000616122 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
SYNCRIP-204ENST00000616122 DNAH5Q8TE73 4624 aa3□□□□□ -1.93
SYNCRIP-204ENST00000616122 FAT1Q14517 4588 aa3□□□□□ -1.93
SYNCRIP-204ENST00000616122 PLECQ15149 4684 aaKnown RBP2.99□□□□□ -1.93
SYNCRIP-204ENST00000616122 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
SYNCRIP-204ENST00000616122 S4R3F8 94 aa2.98□□□□□ -1.93
SYNCRIP-204ENST00000616122 R4GN34 69 aa2.96□□□□□ -1.94
SYNCRIP-204ENST00000616122 XP32Q5T750 250 aa2.96□□□□□ -1.94
SYNCRIP-204ENST00000616122 KRTAP10-8P60410 259 aa2.96□□□□□ -1.94
SYNCRIP-204ENST00000616122 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
SYNCRIP-204ENST00000616122 A0A1B0GVY2 172 aa2.95□□□□□ -1.94
SYNCRIP-204ENST00000616122 H0YAA0 97 aa2.94□□□□□ -1.94
SYNCRIP-204ENST00000616122 KRTAP3-1Q9BYR8 98 aa2.93□□□□□ -1.94
SYNCRIP-204ENST00000616122 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
SYNCRIP-204ENST00000616122 M0QZ58 72 aa2.91□□□□□ -1.94
SYNCRIP-204ENST00000616122 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
SYNCRIP-204ENST00000616122 DYNC1H1Q14204 4646 aaKnown RBP2.9□□□□□ -1.94
SYNCRIP-204ENST00000616122 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.94
SYNCRIP-204ENST00000616122 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.95
SYNCRIP-204ENST00000616122 RYR3Q15413 4870 aa2.9□□□□□ -1.95
SYNCRIP-204ENST00000616122 DNAH9Q9NYC9 4486 aa2.9□□□□□ -1.95
SYNCRIP-204ENST00000616122 KRTAP10-4P60372 401 aaPredicted RBP2.89□□□□□ -1.95
SYNCRIP-204ENST00000616122 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms