RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 OCR1Q9BZK8 76 aa11.66□□□□□ -0.54
SRRM3-205ENST00000612155 MYCBP2O75592 4640 aa11.65□□□□□ -0.54
SRRM3-205ENST00000612155 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
SRRM3-205ENST00000612155 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
SRRM3-205ENST00000612155 LINC00472Q9H8W2 130 aa11.63□□□□□ -0.55
SRRM3-205ENST00000612155 FP248Q71RG6 208 aaPredicted RBP11.62□□□□□ -0.55
SRRM3-205ENST00000612155 ZNF706Q9Y5V0 76 aaPredicted RBP11.62□□□□□ -0.55
SRRM3-205ENST00000612155 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
SRRM3-205ENST00000612155 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
SRRM3-205ENST00000612155 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
SRRM3-205ENST00000612155 MOBPQ13875 183 aa11.58□□□□□ -0.56
SRRM3-205ENST00000612155 KLKP1Q107X0 134 aa11.57□□□□□ -0.56
SRRM3-205ENST00000612155 HCG22E2RYF7 251 aa11.55□□□□□ -0.56
SRRM3-205ENST00000612155 Q96NJ1 140 aa11.55□□□□□ -0.56
SRRM3-205ENST00000612155 FAT3Q8TDW7 4589 aa11.54□□□□□ -0.56
SRRM3-205ENST00000612155 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
SRRM3-205ENST00000612155 H7BZZ5 65 aa11.53□□□□□ -0.56
SRRM3-205ENST00000612155 PRR15Q8IV56 129 aa11.51□□□□□ -0.57
SRRM3-205ENST00000612155 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
SRRM3-205ENST00000612155 A8MWP4 228 aa11.5□□□□□ -0.57
SRRM3-205ENST00000612155 WFDC13Q8IUB5 93 aa11.5□□□□□ -0.57
SRRM3-205ENST00000612155 TMEM254Q8TBM7 123 aa11.5□□□□□ -0.57
SRRM3-205ENST00000612155 A0A087X002 238 aa11.5□□□□□ -0.57
SRRM3-205ENST00000612155 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
SRRM3-205ENST00000612155 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
SRRM3-205ENST00000612155 ATP5EP56381 51 aaPredicted RBP11.44□□□□□ -0.58
SRRM3-205ENST00000612155 TNXBP22105 4242 aa11.43□□□□□ -0.58
SRRM3-205ENST00000612155 KRTAP13-2Q52LG2 175 aa11.43□□□□□ -0.58
SRRM3-205ENST00000612155 MMP24-AS1A0A0U1RRL7 71 aa11.4□□□□□ -0.59
SRRM3-205ENST00000612155 CASC2Q6XLA1 102 aa11.4□□□□□ -0.59
SRRM3-205ENST00000612155 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
SRRM3-205ENST00000612155 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
SRRM3-205ENST00000612155 NDUFC1O43677 76 aa11.34□□□□□ -0.59
SRRM3-205ENST00000612155 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
SRRM3-205ENST00000612155 TYMSOSQ8TAI1 123 aa11.33□□□□□ -0.6
SRRM3-205ENST00000612155 NDUFB1O75438 58 aa11.32□□□□□ -0.6
SRRM3-205ENST00000612155 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
SRRM3-205ENST00000612155 MT1HL1P0DM35 61 aa11.31□□□□□ -0.6
SRRM3-205ENST00000612155 NOTCH2NLQ7Z3S9 236 aa11.3□□□□□ -0.6
SRRM3-205ENST00000612155 A0A1B0GVX0 72 aa11.29□□□□□ -0.6
SRRM3-205ENST00000612155 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
SRRM3-205ENST00000612155 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
SRRM3-205ENST00000612155 KRTAP10-8P60410 259 aa11.28□□□□□ -0.6
SRRM3-205ENST00000612155 IGHV6-1A0A0B4J1U7 121 aa11.28□□□□□ -0.6
SRRM3-205ENST00000612155 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
SRRM3-205ENST00000612155 MPLKIPQ8TAP9 179 aa11.23□□□□□ -0.61
SRRM3-205ENST00000612155 RBM12B-AS1Q9P1G2 102 aa11.22□□□□□ -0.61
SRRM3-205ENST00000612155 J3QL48 77 aa11.21□□□□□ -0.62
SRRM3-205ENST00000612155 H0Y9P7 68 aa11.2□□□□□ -0.62
SRRM3-205ENST00000612155 LINC00208Q96KT6 92 aa11.19□□□□□ -0.62
SRRM3-205ENST00000612155 LINC00304Q8N9R0 145 aa11.18□□□□□ -0.62
SRRM3-205ENST00000612155 MP68P56378 58 aa11.17□□□□□ -0.62
SRRM3-205ENST00000612155 KTN1-AS1Q86SY8 53 aa11.16□□□□□ -0.62
SRRM3-205ENST00000612155 HERC1Q15751 4861 aa11.14□□□□□ -0.63
SRRM3-205ENST00000612155 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
SRRM3-205ENST00000612155 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
SRRM3-205ENST00000612155 C1orf64Q8NEQ6 169 aa11.1□□□□□ -0.63
SRRM3-205ENST00000612155 H3BPC8 53 aa11.09□□□□□ -0.63
SRRM3-205ENST00000612155 H3BS24 57 aa11.09□□□□□ -0.63
SRRM3-205ENST00000612155 TP53AIP1Q9HCN2 124 aa11.09□□□□□ -0.63
SRRM3-205ENST00000612155 NDUFS5O43920 106 aa11.08□□□□□ -0.64
SRRM3-205ENST00000612155 Q1T7F1 81 aa11.07□□□□□ -0.64
SRRM3-205ENST00000612155 PRR4Q16378 134 aa11.06□□□□□ -0.64
SRRM3-205ENST00000612155 RETNLBQ9BQ08 111 aa11.05□□□□□ -0.64
SRRM3-205ENST00000612155 SPINK1P00995 79 aa11.04□□□□□ -0.64
SRRM3-205ENST00000612155 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
SRRM3-205ENST00000612155 Q5W150 140 aa11.01□□□□□ -0.65
SRRM3-205ENST00000612155 C8orf87E5RJ46 101 aa11.01□□□□□ -0.65
SRRM3-205ENST00000612155 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
SRRM3-205ENST00000612155 LIMD2Q9BT23 127 aa10.99□□□□□ -0.65
SRRM3-205ENST00000612155 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
SRRM3-205ENST00000612155 LINC00313P59037 77 aa10.99□□□□□ -0.65
SRRM3-205ENST00000612155 KRTAP16-1A8MUX0 517 aa10.96□□□□□ -0.66
SRRM3-205ENST00000612155 PCOTHQ58A44 107 aa10.94□□□□□ -0.66
SRRM3-205ENST00000612155 SPANXA2-OT1Q8N9U9 137 aa10.94□□□□□ -0.66
SRRM3-205ENST00000612155 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
SRRM3-205ENST00000612155 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
SRRM3-205ENST00000612155 LPAP08519 4548 aa10.87□□□□□ -0.67
SRRM3-205ENST00000612155 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
SRRM3-205ENST00000612155 HMCN2Q8NDA2 5059 aa10.82□□□□□ -0.68
SRRM3-205ENST00000612155 PSPHP1O15172 72 aa10.82□□□□□ -0.68
SRRM3-205ENST00000612155 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
SRRM3-205ENST00000612155 LOC101927531A0A1B0GV80 90 aa10.8□□□□□ -0.68
SRRM3-205ENST00000612155 LCA10Q71F78 164 aa10.8□□□□□ -0.68
SRRM3-205ENST00000612155 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.68
SRRM3-205ENST00000612155 A6NN06 94 aa10.76□□□□□ -0.69
SRRM3-205ENST00000612155 A8MUN3 132 aa10.73□□□□□ -0.69
SRRM3-205ENST00000612155 LRP2P98164 4655 aa10.72□□□□□ -0.69
SRRM3-205ENST00000612155 C9orf92A6NGG3 77 aa10.71□□□□□ -0.69
SRRM3-205ENST00000612155 COA5Q86WW8 74 aa10.71□□□□□ -0.69
SRRM3-205ENST00000612155 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
SRRM3-205ENST00000612155 Q5VV11 94 aa10.7□□□□□ -0.7
SRRM3-205ENST00000612155 A8MU10 97 aa10.69□□□□□ -0.7
SRRM3-205ENST00000612155 HRES1P13985 223 aa10.66□□□□□ -0.7
SRRM3-205ENST00000612155 SPTSSBQ8NFR3 76 aa10.66□□□□□ -0.7
SRRM3-205ENST00000612155 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
SRRM3-205ENST00000612155 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
SRRM3-205ENST00000612155 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
SRRM3-205ENST00000612155 A8MUU9 505 aa10.55□□□□□ -0.72
SRRM3-205ENST00000612155 C20orf166-AS1Q96NR2 134 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms