RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 CYP4F30PQ9H0H9 118 aa2.33□□□□□ -2.04
RNF38-210ENST00000611646 CD164Q04900 197 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 SSBP3-AS1Q7Z2R9 100 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 UQCR11O14957 56 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 Q1T7F1 81 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 FBN1P35555 2871 aaKnown RBP2.32□□□□□ -2.04
RNF38-210ENST00000611646 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
RNF38-210ENST00000611646 A0A0D9SG42 100 aa2.31□□□□□ -2.04
RNF38-210ENST00000611646 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
RNF38-210ENST00000611646 WIPF1O43516 503 aa2.31□□□□□ -2.04
RNF38-210ENST00000611646 HRES1P13985 223 aa2.31□□□□□ -2.04
RNF38-210ENST00000611646 LINC00472Q9H8W2 130 aa2.31□□□□□ -2.04
RNF38-210ENST00000611646 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 TENM1Q9UKZ4 2725 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 PRAC1Q96KF2 57 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 Q5VV11 94 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 KRTAP7-1Q8IUC3 87 aa2.3□□□□□ -2.04
RNF38-210ENST00000611646 KRTAP4-16G5E9R7 235 aaPredicted RBP2.3□□□□□ -2.04
RNF38-210ENST00000611646 SPINK7P58062 85 aa2.29□□□□□ -2.04
RNF38-210ENST00000611646 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
RNF38-210ENST00000611646 DNAH9Q9NYC9 4486 aa2.29□□□□□ -2.04
RNF38-210ENST00000611646 A0A087X002 238 aa2.29□□□□□ -2.04
RNF38-210ENST00000611646 NOTCH2NLQ7Z3S9 236 aa2.29□□□□□ -2.04
RNF38-210ENST00000611646 DNAH1Q9P2D7 4330 aa2.28□□□□□ -2.04
RNF38-210ENST00000611646 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
RNF38-210ENST00000611646 KRTAP10-2P60368 255 aa2.28□□□□□ -2.04
RNF38-210ENST00000611646 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 A8MU10 97 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 LINC01554Q52M75 96 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 Q5W150 140 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 Q75L30 129 aa2.27□□□□□ -2.05
RNF38-210ENST00000611646 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
RNF38-210ENST00000611646 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
RNF38-210ENST00000611646 SPRR1BP22528 89 aa2.25□□□□□ -2.05
RNF38-210ENST00000611646 KRTAP10-1P60331 282 aa2.25□□□□□ -2.05
RNF38-210ENST00000611646 LCA10Q71F78 164 aa2.25□□□□□ -2.05
RNF38-210ENST00000611646 KRTAP29-1A8MX34 341 aaPredicted RBP2.25□□□□□ -2.05
RNF38-210ENST00000611646 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
RNF38-210ENST00000611646 FBN3Q75N90 2809 aa2.24□□□□□ -2.05
RNF38-210ENST00000611646 DNAH3Q8TD57 4116 aa2.24□□□□□ -2.05
RNF38-210ENST00000611646 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
RNF38-210ENST00000611646 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
RNF38-210ENST00000611646 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
RNF38-210ENST00000611646 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
RNF38-210ENST00000611646 A0A1B0GU33 70 aa2.22□□□□□ -2.05
RNF38-210ENST00000611646 KMT2AQ03164 3969 aa2.22□□□□□ -2.05
RNF38-210ENST00000611646 CSAG1Q6PB30 78 aa2.22□□□□□ -2.05
RNF38-210ENST00000611646 LINC00483Q53H64 154 aa2.21□□□□□ -2.06
RNF38-210ENST00000611646 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
RNF38-210ENST00000611646 SPATA8Q6RVD6 105 aa2.2□□□□□ -2.06
RNF38-210ENST00000611646 Q6ZRN7 208 aaPredicted RBP2.2□□□□□ -2.06
RNF38-210ENST00000611646 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
RNF38-210ENST00000611646 Q6ZR54 194 aa2.2□□□□□ -2.06
RNF38-210ENST00000611646 ADM2Q7Z4H4 148 aa2.19□□□□□ -2.06
RNF38-210ENST00000611646 DMBT1Q9UGM3 2413 aaPredicted RBP2.19□□□□□ -2.06
RNF38-210ENST00000611646 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
RNF38-210ENST00000611646 DMAC1Q96GE9 116 aa2.19□□□□□ -2.06
RNF38-210ENST00000611646 DNAH6Q9C0G6 4158 aa2.18□□□□□ -2.06
RNF38-210ENST00000611646 LCE6AA0A183 80 aa2.18□□□□□ -2.06
RNF38-210ENST00000611646 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
RNF38-210ENST00000611646 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
RNF38-210ENST00000611646 Q6ZSA8 131 aa2.17□□□□□ -2.06
RNF38-210ENST00000611646 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
RNF38-210ENST00000611646 TENM2Q9NT68 2774 aa2.16□□□□□ -2.06
RNF38-210ENST00000611646 PKHD1P08F94 4074 aa2.16□□□□□ -2.06
RNF38-210ENST00000611646 S4R3F8 94 aa2.16□□□□□ -2.06
RNF38-210ENST00000611646 Q5VSD8 79 aa2.15□□□□□ -2.06
RNF38-210ENST00000611646 KRTAP21-3Q3LHN1 58 aa2.15□□□□□ -2.07
RNF38-210ENST00000611646 RYR3Q15413 4870 aa2.14□□□□□ -2.07
RNF38-210ENST00000611646 A6NN06 94 aa2.14□□□□□ -2.07
RNF38-210ENST00000611646 H1FX-AS1Q4G0G2 97 aa2.14□□□□□ -2.07
RNF38-210ENST00000611646 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
RNF38-210ENST00000611646 VPS13DQ5THJ4 4388 aa2.13□□□□□ -2.07
RNF38-210ENST00000611646 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
RNF38-210ENST00000611646 TGP01266 2768 aa2.12□□□□□ -2.07
RNF38-210ENST00000611646 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
RNF38-210ENST00000611646 MYCBP2O75592 4640 aa2.11□□□□□ -2.07
RNF38-210ENST00000611646 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
RNF38-210ENST00000611646 VPS13BQ7Z7G8 4022 aa2.11□□□□□ -2.07
RNF38-210ENST00000611646 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
RNF38-210ENST00000611646 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
RNF38-210ENST00000611646 R4GN34 69 aa2.1□□□□□ -2.07
RNF38-210ENST00000611646 PLECQ15149 4684 aaKnown RBP2.1□□□□□ -2.07
RNF38-210ENST00000611646 LCE2BO14633 110 aa2.1□□□□□ -2.07
RNF38-210ENST00000611646 ROMO1P60602 79 aa2.1□□□□□ -2.07
RNF38-210ENST00000611646 M0QZ58 72 aa2.09□□□□□ -2.07
RNF38-210ENST00000611646 M0R2T5 61 aa2.09□□□□□ -2.07
RNF38-210ENST00000611646 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.08
RNF38-210ENST00000611646 ASB16-AS1Q495Z4 193 aa2.08□□□□□ -2.08
RNF38-210ENST00000611646 PKD1P98161 4303 aa2.08□□□□□ -2.08
RNF38-210ENST00000611646 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
RNF38-210ENST00000611646 KRTAP25-1Q3LHN0 102 aa2.06□□□□□ -2.08
RNF38-210ENST00000611646 RYR1P21817 5038 aa2.06□□□□□ -2.08
RNF38-210ENST00000611646 DNAH17Q9UFH2 4485 aa2.06□□□□□ -2.08
RNF38-210ENST00000611646 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
RNF38-210ENST00000611646 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms