RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 MT1HP80294 61 aa9.54□□□□□ -0.88
MUC1-224ENST00000611577 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
MUC1-224ENST00000611577 KRTAP19-2Q3LHN2 52 aa9.53□□□□□ -0.88
MUC1-224ENST00000611577 J3KT08 172 aa9.5□□□□□ -0.89
MUC1-224ENST00000611577 SMCPP49901 116 aaPredicted RBP9.5□□□□□ -0.89
MUC1-224ENST00000611577 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
MUC1-224ENST00000611577 DSCR10P59022 87 aa9.48□□□□□ -0.89
MUC1-224ENST00000611577 PCOTHQ58A44 107 aa9.48□□□□□ -0.89
MUC1-224ENST00000611577 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
MUC1-224ENST00000611577 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
MUC1-224ENST00000611577 LINC00313P59037 77 aa9.47□□□□□ -0.89
MUC1-224ENST00000611577 NREPQ16612 68 aa9.47□□□□□ -0.89
MUC1-224ENST00000611577 F8W1H4 67 aa9.45□□□□□ -0.9
MUC1-224ENST00000611577 NDUFB1O75438 58 aa9.44□□□□□ -0.9
MUC1-224ENST00000611577 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
MUC1-224ENST00000611577 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
MUC1-224ENST00000611577 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
MUC1-224ENST00000611577 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
MUC1-224ENST00000611577 Q75L30 129 aa9.42□□□□□ -0.9
MUC1-224ENST00000611577 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
MUC1-224ENST00000611577 A8MWP4 228 aa9.37□□□□□ -0.91
MUC1-224ENST00000611577 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
MUC1-224ENST00000611577 M0R2T5 61 aa9.36□□□□□ -0.91
MUC1-224ENST00000611577 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
MUC1-224ENST00000611577 NOTCH2NLQ7Z3S9 236 aa9.36□□□□□ -0.91
MUC1-224ENST00000611577 FLGP20930 4061 aaPredicted RBP9.34□□□□□ -0.91
MUC1-224ENST00000611577 A8MUU9 505 aa9.34□□□□□ -0.91
MUC1-224ENST00000611577 BPY2O14599 106 aa9.33□□□□□ -0.92
MUC1-224ENST00000611577 KRTAP16-1A8MUX0 517 aa9.32□□□□□ -0.92
MUC1-224ENST00000611577 Q6ZVQ6 151 aa9.32□□□□□ -0.92
MUC1-224ENST00000611577 UBL5Q9BZL1 73 aa9.32□□□□□ -0.92
MUC1-224ENST00000611577 IGKV3D-7A0A0C4DH55 119 aa9.31□□□□□ -0.92
MUC1-224ENST00000611577 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
MUC1-224ENST00000611577 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
MUC1-224ENST00000611577 A0A1B0GV90 55 aa9.28□□□□□ -0.92
MUC1-224ENST00000611577 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
MUC1-224ENST00000611577 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
MUC1-224ENST00000611577 K7EQZ3 153 aa9.25□□□□□ -0.93
MUC1-224ENST00000611577 MMP24-AS1A0A0U1RRL7 71 aa9.19□□□□□ -0.94
MUC1-224ENST00000611577 Q8N9L7 120 aa9.19□□□□□ -0.94
MUC1-224ENST00000611577 hDV103S1A0JD37 113 aa9.18□□□□□ -0.94
MUC1-224ENST00000611577 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
MUC1-224ENST00000611577 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
MUC1-224ENST00000611577 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
MUC1-224ENST00000611577 NDUFS5O43920 106 aa9.16□□□□□ -0.94
MUC1-224ENST00000611577 ACYP1P07311 99 aa9.15□□□□□ -0.94
MUC1-224ENST00000611577 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
MUC1-224ENST00000611577 SSPOA2VEC9 5147 aa9.15□□□□□ -0.95
MUC1-224ENST00000611577 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
MUC1-224ENST00000611577 USH2AO75445 5202 aa9.13□□□□□ -0.95
MUC1-224ENST00000611577 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
MUC1-224ENST00000611577 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
MUC1-224ENST00000611577 CASC2Q6XLA1 102 aa9.12□□□□□ -0.95
MUC1-224ENST00000611577 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
MUC1-224ENST00000611577 CXCL6P80162 114 aa9.09□□□□□ -0.95
MUC1-224ENST00000611577 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
MUC1-224ENST00000611577 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
MUC1-224ENST00000611577 FAM236DA0A1B0GTK5 79 aa9□□□□□ -0.97
MUC1-224ENST00000611577 J3QR89 54 aa9□□□□□ -0.97
MUC1-224ENST00000611577 FAM236CP0DP71 79 aa9□□□□□ -0.97
MUC1-224ENST00000611577 SPINK7P58062 85 aa9□□□□□ -0.97
MUC1-224ENST00000611577 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
MUC1-224ENST00000611577 HIST1H4AP62805 103 aaKnown RBP8.96□□□□□ -0.98
MUC1-224ENST00000611577 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
MUC1-224ENST00000611577 HRES1P13985 223 aa8.94□□□□□ -0.98
MUC1-224ENST00000611577 LINC00643Q86TS7 51 aa8.94□□□□□ -0.98
MUC1-224ENST00000611577 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
MUC1-224ENST00000611577 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
MUC1-224ENST00000611577 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
MUC1-224ENST00000611577 Q5W150 140 aa8.9□□□□□ -0.98
MUC1-224ENST00000611577 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
MUC1-224ENST00000611577 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
MUC1-224ENST00000611577 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
MUC1-224ENST00000611577 SYNE2Q8WXH0 6885 aaKnown RBP8.83□□□□□ -1
MUC1-224ENST00000611577 MACF1Q9UPN3 7388 aaKnown RBP8.81□□□□□ -1
MUC1-224ENST00000611577 A0A087WVE0 104 aa8.8□□□□□ -1
MUC1-224ENST00000611577 MT2AP02795 61 aa8.79□□□□□ -1
MUC1-224ENST00000611577 K7ERU9 68 aa8.78□□□□□ -1
MUC1-224ENST00000611577 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
MUC1-224ENST00000611577 LCE2BO14633 110 aa8.74□□□□□ -1.01
MUC1-224ENST00000611577 TRAV22A0A0B4J277 110 aa8.72□□□□□ -1.01
MUC1-224ENST00000611577 MT1FP04733 61 aa8.72□□□□□ -1.01
MUC1-224ENST00000611577 UQCRQO14949 82 aa8.71□□□□□ -1.02
MUC1-224ENST00000611577 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
MUC1-224ENST00000611577 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
MUC1-224ENST00000611577 KRTAP9-3Q9BYQ3 159 aa8.67□□□□□ -1.02
MUC1-224ENST00000611577 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.02
MUC1-224ENST00000611577 H0Y9P7 68 aa8.65□□□□□ -1.02
MUC1-224ENST00000611577 ATOX1O00244 68 aa8.65□□□□□ -1.02
MUC1-224ENST00000611577 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
MUC1-224ENST00000611577 SCGB1A1P11684 91 aa8.64□□□□□ -1.03
MUC1-224ENST00000611577 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
MUC1-224ENST00000611577 IMUPQ9GZP8 106 aa8.6□□□□□ -1.03
MUC1-224ENST00000611577 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
MUC1-224ENST00000611577 MP68P56378 58 aa8.58□□□□□ -1.04
MUC1-224ENST00000611577 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
MUC1-224ENST00000611577 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
MUC1-224ENST00000611577 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
MUC1-224ENST00000611577 C5orf47Q569G3 176 aa8.52□□□□□ -1.05
MUC1-224ENST00000611577 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms