RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
RTN1-209ENST00000611068 HECTD4Q9Y4D8 3996 aa9.79□□□□□ -0.84
RTN1-209ENST00000611068 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
RTN1-209ENST00000611068 A0A087WSZ3 146 aa9.79□□□□□ -0.84
RTN1-209ENST00000611068 PRLHP81277 87 aa9.79□□□□□ -0.84
RTN1-209ENST00000611068 REG3GQ6UW15 175 aa9.77□□□□□ -0.85
RTN1-209ENST00000611068 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
RTN1-209ENST00000611068 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
RTN1-209ENST00000611068 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
RTN1-209ENST00000611068 IGFL1Q6UW32 110 aa9.76□□□□□ -0.85
RTN1-209ENST00000611068 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
RTN1-209ENST00000611068 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
RTN1-209ENST00000611068 HRES1P13985 223 aa9.73□□□□□ -0.85
RTN1-209ENST00000611068 SPRR1AP35321 89 aa9.72□□□□□ -0.85
RTN1-209ENST00000611068 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
RTN1-209ENST00000611068 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.85
RTN1-209ENST00000611068 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
RTN1-209ENST00000611068 DNAH11Q96DT5 4516 aa9.65□□□□□ -0.87
RTN1-209ENST00000611068 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
RTN1-209ENST00000611068 A8MWP4 228 aa9.64□□□□□ -0.87
RTN1-209ENST00000611068 SACSQ9NZJ4 4579 aa9.63□□□□□ -0.87
RTN1-209ENST00000611068 FAT2Q9NYQ8 4349 aa9.62□□□□□ -0.87
RTN1-209ENST00000611068 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
RTN1-209ENST00000611068 DNAH8Q96JB1 4490 aa9.62□□□□□ -0.87
RTN1-209ENST00000611068 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
RTN1-209ENST00000611068 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
RTN1-209ENST00000611068 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
RTN1-209ENST00000611068 PKD1P98161 4303 aa9.6□□□□□ -0.87
RTN1-209ENST00000611068 H0Y9J4 135 aa9.59□□□□□ -0.87
RTN1-209ENST00000611068 KRTAP10-1P60331 282 aa9.58□□□□□ -0.88
RTN1-209ENST00000611068 LINC00472Q9H8W2 130 aa9.58□□□□□ -0.88
RTN1-209ENST00000611068 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
RTN1-209ENST00000611068 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
RTN1-209ENST00000611068 CIRBP-AS1Q8TBR5 109 aa9.56□□□□□ -0.88
RTN1-209ENST00000611068 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
RTN1-209ENST00000611068 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
RTN1-209ENST00000611068 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
RTN1-209ENST00000611068 IGLV8-61A0A075B6I0 122 aa9.52□□□□□ -0.88
RTN1-209ENST00000611068 KRTAP13-1Q8IUC0 172 aa9.48□□□□□ -0.89
RTN1-209ENST00000611068 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
RTN1-209ENST00000611068 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
RTN1-209ENST00000611068 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
RTN1-209ENST00000611068 IGLV9-49A0A0B4J1Y8 123 aa9.46□□□□□ -0.9
RTN1-209ENST00000611068 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
RTN1-209ENST00000611068 A0A087X002 238 aa9.42□□□□□ -0.9
RTN1-209ENST00000611068 ZNF861PO60384 105 aa9.41□□□□□ -0.9
RTN1-209ENST00000611068 RYR2Q92736 4967 aa9.41□□□□□ -0.9
RTN1-209ENST00000611068 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
RTN1-209ENST00000611068 A0A1B0GU69 56 aa9.39□□□□□ -0.91
RTN1-209ENST00000611068 Q6ZSA8 131 aa9.39□□□□□ -0.91
RTN1-209ENST00000611068 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
RTN1-209ENST00000611068 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
RTN1-209ENST00000611068 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
RTN1-209ENST00000611068 Q96NJ1 140 aa9.35□□□□□ -0.91
RTN1-209ENST00000611068 SPRR1BP22528 89 aa9.34□□□□□ -0.91
RTN1-209ENST00000611068 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
RTN1-209ENST00000611068 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
RTN1-209ENST00000611068 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
RTN1-209ENST00000611068 ACYP2P14621 99 aa9.32□□□□□ -0.92
RTN1-209ENST00000611068 RYR3Q15413 4870 aa9.32□□□□□ -0.92
RTN1-209ENST00000611068 A0A1B0GVY2 172 aa9.31□□□□□ -0.92
RTN1-209ENST00000611068 UQCR11O14957 56 aa9.31□□□□□ -0.92
RTN1-209ENST00000611068 NOTCH2NLQ7Z3S9 236 aa9.3□□□□□ -0.92
RTN1-209ENST00000611068 ROMO1P60602 79 aa9.29□□□□□ -0.92
RTN1-209ENST00000611068 Q5W150 140 aa9.29□□□□□ -0.92
RTN1-209ENST00000611068 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
RTN1-209ENST00000611068 MRPL34Q9BQ48 92 aaKnown RBP9.27□□□□□ -0.93
RTN1-209ENST00000611068 FAT1Q14517 4588 aa9.25□□□□□ -0.93
RTN1-209ENST00000611068 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
RTN1-209ENST00000611068 DMAC1Q96GE9 116 aa9.21□□□□□ -0.94
RTN1-209ENST00000611068 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
RTN1-209ENST00000611068 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
RTN1-209ENST00000611068 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
RTN1-209ENST00000611068 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
RTN1-209ENST00000611068 P0C880 135 aa9.14□□□□□ -0.95
RTN1-209ENST00000611068 KRTAP1-4P0C5Y4 121 aa9.13□□□□□ -0.95
RTN1-209ENST00000611068 CDK2AP2O75956 126 aa9.12□□□□□ -0.95
RTN1-209ENST00000611068 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
RTN1-209ENST00000611068 A8MUU9 505 aa9.04□□□□□ -0.96
RTN1-209ENST00000611068 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
RTN1-209ENST00000611068 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.96
RTN1-209ENST00000611068 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.96
RTN1-209ENST00000611068 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.96
RTN1-209ENST00000611068 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
RTN1-209ENST00000611068 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
RTN1-209ENST00000611068 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
RTN1-209ENST00000611068 KRTAP17-1Q9BYP8 105 aa9□□□□□ -0.97
RTN1-209ENST00000611068 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
RTN1-209ENST00000611068 HSPG2P98160 4391 aa8.97□□□□□ -0.97
RTN1-209ENST00000611068 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
RTN1-209ENST00000611068 Q5VSD8 79 aa8.93□□□□□ -0.98
RTN1-209ENST00000611068 LRP1Q07954 4544 aaKnown RBP8.93□□□□□ -0.98
RTN1-209ENST00000611068 H0YAA0 97 aa8.92□□□□□ -0.98
RTN1-209ENST00000611068 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
RTN1-209ENST00000611068 SPINK1P00995 79 aa8.9□□□□□ -0.98
RTN1-209ENST00000611068 RYR1P21817 5038 aa8.86□□□□□ -0.99
RTN1-209ENST00000611068 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
RTN1-209ENST00000611068 A0A0A0MQY5 61 aa8.83□□□□□ -1
RTN1-209ENST00000611068 MYCBP2O75592 4640 aa8.81□□□□□ -1
RTN1-209ENST00000611068 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms