RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
SSBP3-216ENST00000610401 A0A087WTM6 91 aa12.16□□□□□ -0.46
SSBP3-216ENST00000610401 MRPL34Q9BQ48 92 aaKnown RBP12.16□□□□□ -0.46
SSBP3-216ENST00000610401 HECTD4Q9Y4D8 3996 aa12.16□□□□□ -0.46
SSBP3-216ENST00000610401 Q5W150 140 aa12.15□□□□□ -0.46
SSBP3-216ENST00000610401 HRES1P13985 223 aa12.14□□□□□ -0.47
SSBP3-216ENST00000610401 PRKDCP78527 4128 aaKnown RBP12.14□□□□□ -0.47
SSBP3-216ENST00000610401 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
SSBP3-216ENST00000610401 SPINK7P58062 85 aa12.11□□□□□ -0.47
SSBP3-216ENST00000610401 DNAH2Q9P225 4427 aa12.1□□□□□ -0.47
SSBP3-216ENST00000610401 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
SSBP3-216ENST00000610401 IGLV5-52A0A0A0MRZ9 124 aa12.09□□□□□ -0.47
SSBP3-216ENST00000610401 DNAH6Q9C0G6 4158 aa12.08□□□□□ -0.47
SSBP3-216ENST00000610401 ZNF861PO60384 105 aa12.07□□□□□ -0.48
SSBP3-216ENST00000610401 LOC101927531A0A1B0GV80 90 aa12.06□□□□□ -0.48
SSBP3-216ENST00000610401 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
SSBP3-216ENST00000610401 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
SSBP3-216ENST00000610401 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.48
SSBP3-216ENST00000610401 Q6ZR54 194 aa12.02□□□□□ -0.49
SSBP3-216ENST00000610401 Q75L30 129 aa12.02□□□□□ -0.49
SSBP3-216ENST00000610401 LY6G6CO95867 125 aa11.99□□□□□ -0.49
SSBP3-216ENST00000610401 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
SSBP3-216ENST00000610401 ASB16-AS1Q495Z4 193 aa11.98□□□□□ -0.49
SSBP3-216ENST00000610401 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.5
SSBP3-216ENST00000610401 LINC01558Q9Y6Z2 57 aa11.92□□□□□ -0.5
SSBP3-216ENST00000610401 IGLV7-43P04211 117 aa11.91□□□□□ -0.5
SSBP3-216ENST00000610401 ATP11AUNQ6ZP68 121 aa11.9□□□□□ -0.5
SSBP3-216ENST00000610401 DYNC2H1Q8NCM8 4307 aaKnown RBP11.9□□□□□ -0.5
SSBP3-216ENST00000610401 CDC42SE1Q9NRR8 79 aa11.89□□□□□ -0.51
SSBP3-216ENST00000610401 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
SSBP3-216ENST00000610401 IGKV2D-30A0A075B6S6 120 aa11.87□□□□□ -0.51
SSBP3-216ENST00000610401 IGKV2-30P06310 120 aa11.87□□□□□ -0.51
SSBP3-216ENST00000610401 KTN1-AS1Q86SY8 53 aa11.87□□□□□ -0.51
SSBP3-216ENST00000610401 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
SSBP3-216ENST00000610401 KRTAP10-2P60368 255 aa11.85□□□□□ -0.51
SSBP3-216ENST00000610401 LINC00313P59037 77 aa11.84□□□□□ -0.51
SSBP3-216ENST00000610401 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
SSBP3-216ENST00000610401 ALMS1Q8TCU4 4167 aa11.82□□□□□ -0.52
SSBP3-216ENST00000610401 DNHD1Q96M86 4753 aa11.82□□□□□ -0.52
SSBP3-216ENST00000610401 SPINK1P00995 79 aa11.81□□□□□ -0.52
SSBP3-216ENST00000610401 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
SSBP3-216ENST00000610401 A6NN06 94 aa11.8□□□□□ -0.52
SSBP3-216ENST00000610401 ACYP2P14621 99 aa11.8□□□□□ -0.52
SSBP3-216ENST00000610401 PRAC1Q96KF2 57 aa11.79□□□□□ -0.52
SSBP3-216ENST00000610401 ADM2Q7Z4H4 148 aa11.75□□□□□ -0.53
SSBP3-216ENST00000610401 KRTAP13-3Q3SY46 172 aa11.73□□□□□ -0.53
SSBP3-216ENST00000610401 A0A1B0GU69 56 aa11.72□□□□□ -0.53
SSBP3-216ENST00000610401 KRTAP13-2Q52LG2 175 aa11.72□□□□□ -0.53
SSBP3-216ENST00000610401 DNAH5Q8TE73 4624 aa11.7□□□□□ -0.54
SSBP3-216ENST00000610401 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.55
SSBP3-216ENST00000610401 Q8N1X5 172 aa11.65□□□□□ -0.55
SSBP3-216ENST00000610401 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
SSBP3-216ENST00000610401 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
SSBP3-216ENST00000610401 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
SSBP3-216ENST00000610401 HYDINQ4G0P3 5121 aa11.64□□□□□ -0.55
SSBP3-216ENST00000610401 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
SSBP3-216ENST00000610401 FAT2Q9NYQ8 4349 aa11.61□□□□□ -0.55
SSBP3-216ENST00000610401 DMAC1Q96GE9 116 aa11.61□□□□□ -0.55
SSBP3-216ENST00000610401 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
SSBP3-216ENST00000610401 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
SSBP3-216ENST00000610401 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
SSBP3-216ENST00000610401 FLG2Q5D862 2391 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-216ENST00000610401 MIR22HGQ0VDD5 57 aa11.5□□□□□ -0.57
SSBP3-216ENST00000610401 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
SSBP3-216ENST00000610401 TYMSOSQ8TAI1 123 aa11.49□□□□□ -0.57
SSBP3-216ENST00000610401 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-216ENST00000610401 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
SSBP3-216ENST00000610401 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.57
SSBP3-216ENST00000610401 UQCR11O14957 56 aa11.42□□□□□ -0.58
SSBP3-216ENST00000610401 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
SSBP3-216ENST00000610401 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-216ENST00000610401 FAT1Q14517 4588 aa11.35□□□□□ -0.59
SSBP3-216ENST00000610401 PKD1P98161 4303 aa11.35□□□□□ -0.59
SSBP3-216ENST00000610401 SPATA8Q6RVD6 105 aa11.32□□□□□ -0.6
SSBP3-216ENST00000610401 CSAG1Q6PB30 78 aa11.26□□□□□ -0.61
SSBP3-216ENST00000610401 Q6ZSA8 131 aa11.24□□□□□ -0.61
SSBP3-216ENST00000610401 LINC00304Q8N9R0 145 aa11.24□□□□□ -0.61
SSBP3-216ENST00000610401 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
SSBP3-216ENST00000610401 LINC01554Q52M75 96 aa11.13□□□□□ -0.63
SSBP3-216ENST00000610401 H3BS24 57 aa11.1□□□□□ -0.63
SSBP3-216ENST00000610401 H0YAA0 97 aa11.07□□□□□ -0.64
SSBP3-216ENST00000610401 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
SSBP3-216ENST00000610401 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
SSBP3-216ENST00000610401 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.65
SSBP3-216ENST00000610401 A0A1B0GU33 70 aa10.99□□□□□ -0.65
SSBP3-216ENST00000610401 SACSQ9NZJ4 4579 aa10.94□□□□□ -0.66
SSBP3-216ENST00000610401 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
SSBP3-216ENST00000610401 A0A0D9SG42 100 aa10.87□□□□□ -0.67
SSBP3-216ENST00000610401 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
SSBP3-216ENST00000610401 A8MUU9 505 aa10.82□□□□□ -0.68
SSBP3-216ENST00000610401 APOBP04114 4563 aaKnown RBP10.81□□□□□ -0.68
SSBP3-216ENST00000610401 C20orf166-AS1Q96NR2 134 aa10.8□□□□□ -0.68
SSBP3-216ENST00000610401 HSPG2P98160 4391 aa10.77□□□□□ -0.69
SSBP3-216ENST00000610401 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
SSBP3-216ENST00000610401 KMT2CQ8NEZ4 4911 aaKnown RBP10.73□□□□□ -0.69
SSBP3-216ENST00000610401 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
SSBP3-216ENST00000610401 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
SSBP3-216ENST00000610401 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.7
SSBP3-216ENST00000610401 K7ERS5 55 aa10.65□□□□□ -0.7
SSBP3-216ENST00000610401 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms