RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 C9JAW5 83 aa7.66□□□□□ -1.18
SSBP4-214ENST00000607020 LCE2BO14633 110 aa7.66□□□□□ -1.18
SSBP4-214ENST00000607020 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
SSBP4-214ENST00000607020 MT2AP02795 61 aa7.65□□□□□ -1.18
SSBP4-214ENST00000607020 CCKP06307 115 aa7.65□□□□□ -1.18
SSBP4-214ENST00000607020 JMJD7-PLA2G4BH0Y9G9 81 aa7.63□□□□□ -1.19
SSBP4-214ENST00000607020 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
SSBP4-214ENST00000607020 SPCS1Q9Y6A9 102 aa7.62□□□□□ -1.19
SSBP4-214ENST00000607020 H3BT86 120 aa7.61□□□□□ -1.19
SSBP4-214ENST00000607020 VPS25Q9BRG1 176 aa7.61□□□□□ -1.19
SSBP4-214ENST00000607020 OBSCN-AS1Q96MR7 158 aa7.6□□□□□ -1.19
SSBP4-214ENST00000607020 Q96NJ1 140 aa7.6□□□□□ -1.19
SSBP4-214ENST00000607020 MTURNQ8N3F0 131 aa7.59□□□□□ -1.19
SSBP4-214ENST00000607020 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
SSBP4-214ENST00000607020 MT1FP04733 61 aa7.58□□□□□ -1.2
SSBP4-214ENST00000607020 PDE6GP18545 87 aa7.57□□□□□ -1.2
SSBP4-214ENST00000607020 Q6ZQT0 140 aa7.57□□□□□ -1.2
SSBP4-214ENST00000607020 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
SSBP4-214ENST00000607020 C21orf62-AS1Q17RA5 79 aa7.56□□□□□ -1.2
SSBP4-214ENST00000607020 K7EP34 96 aa7.55□□□□□ -1.2
SSBP4-214ENST00000607020 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
SSBP4-214ENST00000607020 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
SSBP4-214ENST00000607020 A0A1B0GW54 56 aa7.53□□□□□ -1.2
SSBP4-214ENST00000607020 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
SSBP4-214ENST00000607020 SIGMAR1Q99720 223 aa7.53□□□□□ -1.2
SSBP4-214ENST00000607020 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
SSBP4-214ENST00000607020 IGKV4-1P06312 121 aa7.51□□□□□ -1.21
SSBP4-214ENST00000607020 SMCPP49901 116 aaPredicted RBP7.51□□□□□ -1.21
SSBP4-214ENST00000607020 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
SSBP4-214ENST00000607020 A8MUU9 505 aa7.5□□□□□ -1.21
SSBP4-214ENST00000607020 DEFB116Q30KQ4 102 aa7.5□□□□□ -1.21
SSBP4-214ENST00000607020 PRO0461Q9UI25 63 aa7.5□□□□□ -1.21
SSBP4-214ENST00000607020 GTF2H5Q6ZYL4 71 aa7.48□□□□□ -1.21
SSBP4-214ENST00000607020 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
SSBP4-214ENST00000607020 J3KT08 172 aa7.45□□□□□ -1.22
SSBP4-214ENST00000607020 DSCR10P59022 87 aa7.45□□□□□ -1.22
SSBP4-214ENST00000607020 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
SSBP4-214ENST00000607020 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
SSBP4-214ENST00000607020 LINC00313P59037 77 aa7.42□□□□□ -1.22
SSBP4-214ENST00000607020 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
SSBP4-214ENST00000607020 F8W1H4 67 aa7.41□□□□□ -1.22
SSBP4-214ENST00000607020 NREPQ16612 68 aa7.41□□□□□ -1.22
SSBP4-214ENST00000607020 FAM236DA0A1B0GTK5 79 aa7.4□□□□□ -1.22
SSBP4-214ENST00000607020 FAM236CP0DP71 79 aa7.4□□□□□ -1.22
SSBP4-214ENST00000607020 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
SSBP4-214ENST00000607020 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
SSBP4-214ENST00000607020 C8orf87E5RJ46 101 aa7.38□□□□□ -1.23
SSBP4-214ENST00000607020 A8MWP4 228 aa7.37□□□□□ -1.23
SSBP4-214ENST00000607020 NDUFB1O75438 58 aa7.37□□□□□ -1.23
SSBP4-214ENST00000607020 RBM12B-AS1Q9P1G2 102 aa7.37□□□□□ -1.23
SSBP4-214ENST00000607020 HRES1P13985 223 aa7.35□□□□□ -1.23
SSBP4-214ENST00000607020 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
SSBP4-214ENST00000607020 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
SSBP4-214ENST00000607020 Q6ZVQ6 151 aa7.32□□□□□ -1.24
SSBP4-214ENST00000607020 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
SSBP4-214ENST00000607020 C8orf17Q9NRJ1 99 aa7.31□□□□□ -1.24
SSBP4-214ENST00000607020 NEBP20929 6669 aa7.3□□□□□ -1.24
SSBP4-214ENST00000607020 BPY2O14599 106 aa7.3□□□□□ -1.24
SSBP4-214ENST00000607020 K7EQZ3 153 aa7.28□□□□□ -1.24
SSBP4-214ENST00000607020 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
SSBP4-214ENST00000607020 A0A1B0GV90 55 aa7.26□□□□□ -1.25
SSBP4-214ENST00000607020 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
SSBP4-214ENST00000607020 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
SSBP4-214ENST00000607020 Q8N9L7 120 aa7.22□□□□□ -1.25
SSBP4-214ENST00000607020 TMEM254Q8TBM7 123 aa7.21□□□□□ -1.26
SSBP4-214ENST00000607020 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
SSBP4-214ENST00000607020 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
SSBP4-214ENST00000607020 MRPL34Q9BQ48 92 aaKnown RBP7.19□□□□□ -1.26
SSBP4-214ENST00000607020 FAM240AA0A1B0GVK7 77 aa7.16□□□□□ -1.26
SSBP4-214ENST00000607020 ACYP1P07311 99 aa7.16□□□□□ -1.26
SSBP4-214ENST00000607020 CXCL6P80162 114 aa7.14□□□□□ -1.27
SSBP4-214ENST00000607020 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
SSBP4-214ENST00000607020 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
SSBP4-214ENST00000607020 MUC12Q9UKN1 5478 aa7.14□□□□□ -1.27
SSBP4-214ENST00000607020 NDUFS5O43920 106 aa7.12□□□□□ -1.27
SSBP4-214ENST00000607020 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
SSBP4-214ENST00000607020 KRTAP20-1Q3LI63 56 aa7.1□□□□□ -1.27
SSBP4-214ENST00000607020 SPINK7P58062 85 aa7.09□□□□□ -1.27
SSBP4-214ENST00000607020 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
SSBP4-214ENST00000607020 Q5W150 140 aa7.03□□□□□ -1.28
SSBP4-214ENST00000607020 J3QR89 54 aa7□□□□□ -1.29
SSBP4-214ENST00000607020 LINC00643Q86TS7 51 aa7□□□□□ -1.29
SSBP4-214ENST00000607020 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
SSBP4-214ENST00000607020 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
SSBP4-214ENST00000607020 IGKV2-30P06310 120 aa6.96□□□□□ -1.3
SSBP4-214ENST00000607020 TP53AIP1Q9HCN2 124 aa6.96□□□□□ -1.3
SSBP4-214ENST00000607020 C7orf65Q6ZTY9 151 aa6.95□□□□□ -1.3
SSBP4-214ENST00000607020 A6NN06 94 aa6.93□□□□□ -1.3
SSBP4-214ENST00000607020 KRTAP5-9P26371 169 aa6.92□□□□□ -1.3
SSBP4-214ENST00000607020 A0A087WVE0 104 aa6.91□□□□□ -1.3
SSBP4-214ENST00000607020 KMT2DO14686 5537 aa6.91□□□□□ -1.3
SSBP4-214ENST00000607020 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
SSBP4-214ENST00000607020 MDN1Q9NU22 5596 aa6.9□□□□□ -1.31
SSBP4-214ENST00000607020 K7ERU9 68 aa6.85□□□□□ -1.31
SSBP4-214ENST00000607020 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
SSBP4-214ENST00000607020 MT1BP07438 61 aa6.84□□□□□ -1.31
SSBP4-214ENST00000607020 UQCRQO14949 82 aa6.82□□□□□ -1.32
SSBP4-214ENST00000607020 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
SSBP4-214ENST00000607020 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
SSBP4-214ENST00000607020 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms