RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 RYR3Q15413 4870 aa3.31□□□□□ -1.88
COL4A3BP-207ENST00000604926 FAT3Q8TDW7 4589 aa3.3□□□□□ -1.88
COL4A3BP-207ENST00000604926 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
COL4A3BP-207ENST00000604926 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
COL4A3BP-207ENST00000604926 CLPSL2Q6UWE3 100 aa3.29□□□□□ -1.88
COL4A3BP-207ENST00000604926 FLG2Q5D862 2391 aaPredicted RBP3.29□□□□□ -1.88
COL4A3BP-207ENST00000604926 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
COL4A3BP-207ENST00000604926 DEFB109BQ30KR1 87 aa3.29□□□□□ -1.88
COL4A3BP-207ENST00000604926 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
COL4A3BP-207ENST00000604926 ZANQ9Y493 2812 aa3.28□□□□□ -1.88
COL4A3BP-207ENST00000604926 G3V318 75 aa3.27□□□□□ -1.89
COL4A3BP-207ENST00000604926 RHPN1-AS1Q9BWJ2 59 aa3.27□□□□□ -1.89
COL4A3BP-207ENST00000604926 TGP01266 2768 aa3.26□□□□□ -1.89
COL4A3BP-207ENST00000604926 HIVEP1P15822 2718 aa3.26□□□□□ -1.89
COL4A3BP-207ENST00000604926 DNAH2Q9P225 4427 aa3.26□□□□□ -1.89
COL4A3BP-207ENST00000604926 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
COL4A3BP-207ENST00000604926 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
COL4A3BP-207ENST00000604926 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
COL4A3BP-207ENST00000604926 MINOS1Q5TGZ0 78 aa3.25□□□□□ -1.89
COL4A3BP-207ENST00000604926 APCP25054 2843 aa3.24□□□□□ -1.89
COL4A3BP-207ENST00000604926 TNXBP22105 4242 aa3.23□□□□□ -1.89
COL4A3BP-207ENST00000604926 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
COL4A3BP-207ENST00000604926 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
COL4A3BP-207ENST00000604926 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
COL4A3BP-207ENST00000604926 C4orf3Q8WVX3 66 aa3.22□□□□□ -1.89
COL4A3BP-207ENST00000604926 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
COL4A3BP-207ENST00000604926 C6orf48Q9UBA6 75 aa3.21□□□□□ -1.89
COL4A3BP-207ENST00000604926 LYNX1G3V0Z9 82 aa3.21□□□□□ -1.9
COL4A3BP-207ENST00000604926 LYNX1P0DP58 116 aa3.21□□□□□ -1.9
COL4A3BP-207ENST00000604926 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
COL4A3BP-207ENST00000604926 C14orf177Q52M58 125 aa3.21□□□□□ -1.9
COL4A3BP-207ENST00000604926 RYR2Q92736 4967 aa3.2□□□□□ -1.9
COL4A3BP-207ENST00000604926 IGLV5-48A0A075B6I7 105 aa3.2□□□□□ -1.9
COL4A3BP-207ENST00000604926 A0A1B0GUV1 79 aa3.2□□□□□ -1.9
COL4A3BP-207ENST00000604926 H3BUA1 57 aa3.2□□□□□ -1.9
COL4A3BP-207ENST00000604926 Q6ZRX8 168 aa3.2□□□□□ -1.9
COL4A3BP-207ENST00000604926 FBN1P35555 2871 aaKnown RBP3.19□□□□□ -1.9
COL4A3BP-207ENST00000604926 LY6G6CO95867 125 aa3.19□□□□□ -1.9
COL4A3BP-207ENST00000604926 DEFB131AP59861 70 aa3.18□□□□□ -1.9
COL4A3BP-207ENST00000604926 BRD3OSQ6XYD6 125 aa3.18□□□□□ -1.9
COL4A3BP-207ENST00000604926 TRRAPQ9Y4A5 3859 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 A0A096LPF7 62 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 H0YAA0 97 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 KRTAP24-1Q3LI83 254 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 UNQ6190/PRO20217Q6UXQ8 127 aa3.17□□□□□ -1.9
COL4A3BP-207ENST00000604926 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
COL4A3BP-207ENST00000604926 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
COL4A3BP-207ENST00000604926 TP53AIP1Q9HCN2 124 aa3.16□□□□□ -1.9
COL4A3BP-207ENST00000604926 DYNC1H1Q14204 4646 aaKnown RBP3.16□□□□□ -1.9
COL4A3BP-207ENST00000604926 LY6EQ16553 131 aa3.15□□□□□ -1.9
COL4A3BP-207ENST00000604926 LELP1Q5T871 98 aa3.15□□□□□ -1.9
COL4A3BP-207ENST00000604926 LCE2BO14633 110 aa3.15□□□□□ -1.91
COL4A3BP-207ENST00000604926 PLECQ15149 4684 aaKnown RBP3.15□□□□□ -1.91
COL4A3BP-207ENST00000604926 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
COL4A3BP-207ENST00000604926 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
COL4A3BP-207ENST00000604926 KRTAP10-9P60411 292 aa3.13□□□□□ -1.91
COL4A3BP-207ENST00000604926 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
COL4A3BP-207ENST00000604926 A0A096LNI7 61 aa3.12□□□□□ -1.91
COL4A3BP-207ENST00000604926 Q6ZSA8 131 aa3.12□□□□□ -1.91
COL4A3BP-207ENST00000604926 MAPK1IP1LQ8NDC0 245 aa3.12□□□□□ -1.91
COL4A3BP-207ENST00000604926 DEFB130BP0DP73 79 aa3.11□□□□□ -1.91
COL4A3BP-207ENST00000604926 DEFB130AP0DP74 79 aa3.11□□□□□ -1.91
COL4A3BP-207ENST00000604926 DMBT1Q9UGM3 2413 aaPredicted RBP3.11□□□□□ -1.91
COL4A3BP-207ENST00000604926 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
COL4A3BP-207ENST00000604926 SPINK1P00995 79 aa3.1□□□□□ -1.91
COL4A3BP-207ENST00000604926 MXRA5Q9NR99 2828 aa3.1□□□□□ -1.91
COL4A3BP-207ENST00000604926 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
COL4A3BP-207ENST00000604926 TENM3Q9P273 2699 aa3.1□□□□□ -1.91
COL4A3BP-207ENST00000604926 USMG5Q96IX5 58 aa3.09□□□□□ -1.91
COL4A3BP-207ENST00000604926 SMR3AQ99954 134 aa3.09□□□□□ -1.91
COL4A3BP-207ENST00000604926 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.91
COL4A3BP-207ENST00000604926 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
COL4A3BP-207ENST00000604926 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
COL4A3BP-207ENST00000604926 XP32Q5T750 250 aa3.07□□□□□ -1.92
COL4A3BP-207ENST00000604926 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
COL4A3BP-207ENST00000604926 TENM1Q9UKZ4 2725 aa3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 FAT1Q14517 4588 aa3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 NSD1Q96L73 2696 aaPredicted RBP3.06□□□□□ -1.92
COL4A3BP-207ENST00000604926 HTN3P15516 51 aa3.05□□□□□ -1.92
COL4A3BP-207ENST00000604926 VWFP04275 2813 aa3.05□□□□□ -1.92
COL4A3BP-207ENST00000604926 STAB2Q8WWQ8 2551 aa3.03□□□□□ -1.92
COL4A3BP-207ENST00000604926 INE1O15225 51 aa3.03□□□□□ -1.92
COL4A3BP-207ENST00000604926 PRLHP81277 87 aa3.03□□□□□ -1.92
COL4A3BP-207ENST00000604926 C10orf99Q6UWK7 81 aa3.03□□□□□ -1.92
COL4A3BP-207ENST00000604926 RYR1P21817 5038 aa3.03□□□□□ -1.93
COL4A3BP-207ENST00000604926 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.93
COL4A3BP-207ENST00000604926 H3BUX3 64 aa3.03□□□□□ -1.93
COL4A3BP-207ENST00000604926 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.93
COL4A3BP-207ENST00000604926 KMT2CQ8NEZ4 4911 aaKnown RBP3.02□□□□□ -1.93
COL4A3BP-207ENST00000604926 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
COL4A3BP-207ENST00000604926 HSPG2P98160 4391 aa3.01□□□□□ -1.93
COL4A3BP-207ENST00000604926 TENM2Q9NT68 2774 aa3.01□□□□□ -1.93
COL4A3BP-207ENST00000604926 MYCBP2O75592 4640 aa3□□□□□ -1.93
COL4A3BP-207ENST00000604926 A0A1B0GVY2 172 aa3□□□□□ -1.93
COL4A3BP-207ENST00000604926 LORP23490 312 aaPredicted RBP3□□□□□ -1.93
COL4A3BP-207ENST00000604926 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms