RNA–Protein interactions for RNA: ENST00000602149.1

ZNF549-204, Transcript of zinc finger protein 549, humanhuman

TSL 1 (best) BASIC

Gene ZNF549, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-204ENST00000602149 Q8N1X5 172 aa4.59□□□□□ -1.68
ZNF549-204ENST00000602149 PRR26Q8N8Z3 221 aa4.58□□□□□ -1.68
ZNF549-204ENST00000602149 Q5VSD8 79 aa4.58□□□□□ -1.68
ZNF549-204ENST00000602149 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
ZNF549-204ENST00000602149 KLKP1Q107X0 134 aa4.56□□□□□ -1.68
ZNF549-204ENST00000602149 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
ZNF549-204ENST00000602149 SPRR1BP22528 89 aa4.54□□□□□ -1.68
ZNF549-204ENST00000602149 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
ZNF549-204ENST00000602149 S4R3F8 94 aa4.54□□□□□ -1.68
ZNF549-204ENST00000602149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
ZNF549-204ENST00000602149 Q6ZR54 194 aa4.51□□□□□ -1.69
ZNF549-204ENST00000602149 SPRR1AP35321 89 aa4.5□□□□□ -1.69
ZNF549-204ENST00000602149 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
ZNF549-204ENST00000602149 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
ZNF549-204ENST00000602149 H3BS24 57 aa4.5□□□□□ -1.69
ZNF549-204ENST00000602149 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
ZNF549-204ENST00000602149 H7BZZ5 65 aa4.48□□□□□ -1.69
ZNF549-204ENST00000602149 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
ZNF549-204ENST00000602149 A0A1B0GU33 70 aa4.47□□□□□ -1.69
ZNF549-204ENST00000602149 Q1T7F1 81 aa4.47□□□□□ -1.69
ZNF549-204ENST00000602149 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
ZNF549-204ENST00000602149 SRRM2Q9UQ35 2752 aaKnown RBP4.47□□□□□ -1.69
ZNF549-204ENST00000602149 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
ZNF549-204ENST00000602149 Q8NDZ9 215 aa4.47□□□□□ -1.69
ZNF549-204ENST00000602149 R4GN34 69 aa4.46□□□□□ -1.7
ZNF549-204ENST00000602149 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
ZNF549-204ENST00000602149 KRTAP10-1P60331 282 aa4.44□□□□□ -1.7
ZNF549-204ENST00000602149 LCA10Q71F78 164 aa4.44□□□□□ -1.7
ZNF549-204ENST00000602149 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
ZNF549-204ENST00000602149 MEGF8Q7Z7M0 2845 aa4.42□□□□□ -1.7
ZNF549-204ENST00000602149 SPINK7P58062 85 aa4.42□□□□□ -1.7
ZNF549-204ENST00000602149 KRTAP26-1Q6PEX3 210 aa4.39□□□□□ -1.71
ZNF549-204ENST00000602149 MMP24-AS1A0A0U1RRL7 71 aa4.39□□□□□ -1.71
ZNF549-204ENST00000602149 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
ZNF549-204ENST00000602149 Q5XG85 94 aa4.39□□□□□ -1.71
ZNF549-204ENST00000602149 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
ZNF549-204ENST00000602149 ASB16-AS1Q495Z4 193 aa4.36□□□□□ -1.71
ZNF549-204ENST00000602149 Q8N9P0 234 aaPredicted RBP4.36□□□□□ -1.71
ZNF549-204ENST00000602149 ANK2Q01484 3957 aa4.35□□□□□ -1.71
ZNF549-204ENST00000602149 Q5W150 140 aa4.35□□□□□ -1.71
ZNF549-204ENST00000602149 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
ZNF549-204ENST00000602149 DNHD1Q96M86 4753 aa4.34□□□□□ -1.72
ZNF549-204ENST00000602149 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
ZNF549-204ENST00000602149 M0QZ58 72 aa4.32□□□□□ -1.72
ZNF549-204ENST00000602149 Q75L30 129 aa4.32□□□□□ -1.72
ZNF549-204ENST00000602149 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
ZNF549-204ENST00000602149 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
ZNF549-204ENST00000602149 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
ZNF549-204ENST00000602149 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
ZNF549-204ENST00000602149 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
ZNF549-204ENST00000602149 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
ZNF549-204ENST00000602149 PANO1I0J062 215 aa4.29□□□□□ -1.72
ZNF549-204ENST00000602149 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
ZNF549-204ENST00000602149 KRTAP4-16G5E9R7 235 aaPredicted RBP4.24□□□□□ -1.73
ZNF549-204ENST00000602149 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
ZNF549-204ENST00000602149 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
ZNF549-204ENST00000602149 ROMO1P60602 79 aa4.23□□□□□ -1.73
ZNF549-204ENST00000602149 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
ZNF549-204ENST00000602149 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.73
ZNF549-204ENST00000602149 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
ZNF549-204ENST00000602149 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
ZNF549-204ENST00000602149 Q5VV11 94 aa4.2□□□□□ -1.74
ZNF549-204ENST00000602149 LYSTQ99698 3801 aa4.19□□□□□ -1.74
ZNF549-204ENST00000602149 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
ZNF549-204ENST00000602149 A0A087X002 238 aa4.17□□□□□ -1.74
ZNF549-204ENST00000602149 DNAH10Q8IVF4 4471 aa4.16□□□□□ -1.74
ZNF549-204ENST00000602149 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
ZNF549-204ENST00000602149 A8MUU9 505 aa4.14□□□□□ -1.75
ZNF549-204ENST00000602149 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
ZNF549-204ENST00000602149 DNAH9Q9NYC9 4486 aa4.14□□□□□ -1.75
ZNF549-204ENST00000602149 PLECQ15149 4684 aaKnown RBP4.13□□□□□ -1.75
ZNF549-204ENST00000602149 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
ZNF549-204ENST00000602149 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
ZNF549-204ENST00000602149 TNP1P09430 55 aa4.1□□□□□ -1.75
ZNF549-204ENST00000602149 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
ZNF549-204ENST00000602149 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
ZNF549-204ENST00000602149 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
ZNF549-204ENST00000602149 CMYA5Q8N3K9 4069 aa4.08□□□□□ -1.76
ZNF549-204ENST00000602149 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
ZNF549-204ENST00000602149 DNAH7Q8WXX0 4024 aa4.05□□□□□ -1.76
ZNF549-204ENST00000602149 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
ZNF549-204ENST00000602149 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
ZNF549-204ENST00000602149 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
ZNF549-204ENST00000602149 A8MU10 97 aa4.01□□□□□ -1.77
ZNF549-204ENST00000602149 A6NN06 94 aa4□□□□□ -1.77
ZNF549-204ENST00000602149 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
ZNF549-204ENST00000602149 DNAH3Q8TD57 4116 aa3.97□□□□□ -1.77
ZNF549-204ENST00000602149 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
ZNF549-204ENST00000602149 XP32Q5T750 250 aa3.96□□□□□ -1.78
ZNF549-204ENST00000602149 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
ZNF549-204ENST00000602149 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
ZNF549-204ENST00000602149 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
ZNF549-204ENST00000602149 VPS13DQ5THJ4 4388 aa3.92□□□□□ -1.78
ZNF549-204ENST00000602149 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
ZNF549-204ENST00000602149 FAT1Q14517 4588 aa3.91□□□□□ -1.78
ZNF549-204ENST00000602149 KRTAP10-10P60014 251 aa3.9□□□□□ -1.78
ZNF549-204ENST00000602149 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.79
ZNF549-204ENST00000602149 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
ZNF549-204ENST00000602149 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
ZNF549-204ENST00000602149 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms