RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
CHMP2A-205ENST00000600006 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
CHMP2A-205ENST00000600006 J3KT08 172 aa4.29□□□□□ -1.72
CHMP2A-205ENST00000600006 Q96NJ1 140 aa4.29□□□□□ -1.72
CHMP2A-205ENST00000600006 LINC00472Q9H8W2 130 aa4.29□□□□□ -1.72
CHMP2A-205ENST00000600006 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
CHMP2A-205ENST00000600006 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
CHMP2A-205ENST00000600006 NREPQ16612 68 aa4.27□□□□□ -1.73
CHMP2A-205ENST00000600006 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
CHMP2A-205ENST00000600006 UBL5Q9BZL1 73 aa4.25□□□□□ -1.73
CHMP2A-205ENST00000600006 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
CHMP2A-205ENST00000600006 NDUFB1O75438 58 aa4.24□□□□□ -1.73
CHMP2A-205ENST00000600006 ACYP1P07311 99 aa4.24□□□□□ -1.73
CHMP2A-205ENST00000600006 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
CHMP2A-205ENST00000600006 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
CHMP2A-205ENST00000600006 A8MWP4 228 aa4.23□□□□□ -1.73
CHMP2A-205ENST00000600006 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
CHMP2A-205ENST00000600006 Q6ZVQ6 151 aa4.23□□□□□ -1.73
CHMP2A-205ENST00000600006 Q75L30 129 aa4.23□□□□□ -1.73
CHMP2A-205ENST00000600006 BPY2O14599 106 aa4.22□□□□□ -1.73
CHMP2A-205ENST00000600006 DEFB116Q30KQ4 102 aa4.22□□□□□ -1.73
CHMP2A-205ENST00000600006 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
CHMP2A-205ENST00000600006 LINC00313P59037 77 aa4.21□□□□□ -1.74
CHMP2A-205ENST00000600006 IGHV6-1A0A0B4J1U7 121 aa4.2□□□□□ -1.74
CHMP2A-205ENST00000600006 J3QR89 54 aa4.2□□□□□ -1.74
CHMP2A-205ENST00000600006 C20orf166-AS1Q96NR2 134 aa4.2□□□□□ -1.74
CHMP2A-205ENST00000600006 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
CHMP2A-205ENST00000600006 A8MUU9 505 aa4.19□□□□□ -1.74
CHMP2A-205ENST00000600006 MT1HP80294 61 aa4.19□□□□□ -1.74
CHMP2A-205ENST00000600006 PRR15Q8IV56 129 aa4.19□□□□□ -1.74
CHMP2A-205ENST00000600006 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
CHMP2A-205ENST00000600006 DSCR10P59022 87 aa4.18□□□□□ -1.74
CHMP2A-205ENST00000600006 CXCL6P80162 114 aa4.18□□□□□ -1.74
CHMP2A-205ENST00000600006 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
CHMP2A-205ENST00000600006 ATP5EP2Q5VTU8 51 aa4.17□□□□□ -1.74
CHMP2A-205ENST00000600006 C8orf17Q9NRJ1 99 aa4.17□□□□□ -1.74
CHMP2A-205ENST00000600006 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
CHMP2A-205ENST00000600006 K7EQZ3 153 aa4.16□□□□□ -1.74
CHMP2A-205ENST00000600006 H3BS24 57 aa4.15□□□□□ -1.75
CHMP2A-205ENST00000600006 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
CHMP2A-205ENST00000600006 MMP24-AS1A0A0U1RRL7 71 aa4.14□□□□□ -1.75
CHMP2A-205ENST00000600006 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
CHMP2A-205ENST00000600006 hDV103S1A0JD37 113 aa4.13□□□□□ -1.75
CHMP2A-205ENST00000600006 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
CHMP2A-205ENST00000600006 TMEM254Q8TBM7 123 aa4.13□□□□□ -1.75
CHMP2A-205ENST00000600006 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
CHMP2A-205ENST00000600006 K7ERU9 68 aa4.12□□□□□ -1.75
CHMP2A-205ENST00000600006 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
CHMP2A-205ENST00000600006 MRPL34Q9BQ48 92 aaKnown RBP4.12□□□□□ -1.75
CHMP2A-205ENST00000600006 HCG22E2RYF7 251 aa4.11□□□□□ -1.75
CHMP2A-205ENST00000600006 Q8N9L7 120 aa4.11□□□□□ -1.75
CHMP2A-205ENST00000600006 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
CHMP2A-205ENST00000600006 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
CHMP2A-205ENST00000600006 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
CHMP2A-205ENST00000600006 M0R2T5 61 aa4.08□□□□□ -1.76
CHMP2A-205ENST00000600006 WFDC13Q8IUB5 93 aa4.08□□□□□ -1.76
CHMP2A-205ENST00000600006 ZCCHC13Q8WW36 166 aaKnown RBP4.08□□□□□ -1.76
CHMP2A-205ENST00000600006 NDUFS5O43920 106 aa4.06□□□□□ -1.76
CHMP2A-205ENST00000600006 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
CHMP2A-205ENST00000600006 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
CHMP2A-205ENST00000600006 HRES1P13985 223 aa4.04□□□□□ -1.76
CHMP2A-205ENST00000600006 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
CHMP2A-205ENST00000600006 TP53AIP1Q9HCN2 124 aa4.04□□□□□ -1.76
CHMP2A-205ENST00000600006 IMUPQ9GZP8 106 aa4.03□□□□□ -1.76
CHMP2A-205ENST00000600006 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
CHMP2A-205ENST00000600006 A0A087WVE0 104 aa4□□□□□ -1.77
CHMP2A-205ENST00000600006 FAM236DA0A1B0GTK5 79 aa4□□□□□ -1.77
CHMP2A-205ENST00000600006 FAM236CP0DP71 79 aa4□□□□□ -1.77
CHMP2A-205ENST00000600006 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
CHMP2A-205ENST00000600006 C7orf65Q6ZTY9 151 aa3.99□□□□□ -1.77
CHMP2A-205ENST00000600006 SPINK7P58062 85 aa3.98□□□□□ -1.77
CHMP2A-205ENST00000600006 TRAV22A0A0B4J277 110 aa3.97□□□□□ -1.77
CHMP2A-205ENST00000600006 UQCRQO14949 82 aa3.97□□□□□ -1.77
CHMP2A-205ENST00000600006 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
CHMP2A-205ENST00000600006 Q5W150 140 aa3.97□□□□□ -1.77
CHMP2A-205ENST00000600006 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
CHMP2A-205ENST00000600006 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
CHMP2A-205ENST00000600006 ATOX1O00244 68 aa3.95□□□□□ -1.78
CHMP2A-205ENST00000600006 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
CHMP2A-205ENST00000600006 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
CHMP2A-205ENST00000600006 SCGB1A1P11684 91 aa3.94□□□□□ -1.78
CHMP2A-205ENST00000600006 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
CHMP2A-205ENST00000600006 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
CHMP2A-205ENST00000600006 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
CHMP2A-205ENST00000600006 MT2AP02795 61 aa3.92□□□□□ -1.78
CHMP2A-205ENST00000600006 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
CHMP2A-205ENST00000600006 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
CHMP2A-205ENST00000600006 H0Y9P7 68 aa3.91□□□□□ -1.78
CHMP2A-205ENST00000600006 LCE2BO14633 110 aa3.91□□□□□ -1.78
CHMP2A-205ENST00000600006 MP68P56378 58 aa3.91□□□□□ -1.78
CHMP2A-205ENST00000600006 H3BPC8 53 aa3.9□□□□□ -1.79
CHMP2A-205ENST00000600006 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
CHMP2A-205ENST00000600006 MT1FP04733 61 aa3.88□□□□□ -1.79
CHMP2A-205ENST00000600006 PCP4P48539 62 aa3.88□□□□□ -1.79
CHMP2A-205ENST00000600006 CYP4F30PQ9H0H9 118 aa3.88□□□□□ -1.79
CHMP2A-205ENST00000600006 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
CHMP2A-205ENST00000600006 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
CHMP2A-205ENST00000600006 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
CHMP2A-205ENST00000600006 USH2AO75445 5202 aa3.85□□□□□ -1.79
CHMP2A-205ENST00000600006 C4orf26Q17RF5 130 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms