RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ANAPC16Q96DE5 110 aa1.61□□□□□ -2.15
HERC3-213ENST00000598772 J3QQQ9 107 aa1.6□□□□□ -2.15
HERC3-213ENST00000598772 SCGB1D1O95968 90 aa1.6□□□□□ -2.15
HERC3-213ENST00000598772 MT1EP04732 61 aa1.6□□□□□ -2.15
HERC3-213ENST00000598772 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
HERC3-213ENST00000598772 A0A1B0GVX0 72 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 hADV29S1A0JD25 119 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 C9JQL5 133 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 MT1GP13640 62 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 BLOC1S1P78537 153 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 VAMP3Q15836 100 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 Q5W150 140 aa1.59□□□□□ -2.15
HERC3-213ENST00000598772 LINC01546A6NGU7 62 aa1.58□□□□□ -2.16
HERC3-213ENST00000598772 TRAPPC1Q9Y5R8 145 aa1.58□□□□□ -2.16
HERC3-213ENST00000598772 A0A096LNJ9 63 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 LCE3AQ5TA76 89 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 LINC00575Q6W349 94 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 MT1MQ8N339 61 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 SMIM11BQ8TCY0 68 aa1.57□□□□□ -2.16
HERC3-213ENST00000598772 LINC00614P0C842 121 aa1.56□□□□□ -2.16
HERC3-213ENST00000598772 HERVK_113P61574 105 aa1.56□□□□□ -2.16
HERC3-213ENST00000598772 FABP9Q0Z7S8 132 aa1.56□□□□□ -2.16
HERC3-213ENST00000598772 LINC01554Q52M75 96 aa1.56□□□□□ -2.16
HERC3-213ENST00000598772 TCTE3Q8IZS6 198 aa1.56□□□□□ -2.16
HERC3-213ENST00000598772 TRAV12-1A0A0B4J245 112 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 A0A1B0GV72 72 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 H3BMG7 143 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 NDUFS5O43920 106 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 RAB37Q96AX2 223 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 IFI27L1Q96BM0 104 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 HSPB8Q9UJY1 196 aa1.55□□□□□ -2.16
HERC3-213ENST00000598772 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
HERC3-213ENST00000598772 C7orf65Q6ZTY9 151 aa1.54□□□□□ -2.16
HERC3-213ENST00000598772 SLC51BQ86UW2 128 aa1.54□□□□□ -2.16
HERC3-213ENST00000598772 C12orf57Q99622 126 aa1.54□□□□□ -2.16
HERC3-213ENST00000598772 MT-ND4LP03901 98 aa1.53□□□□□ -2.16
HERC3-213ENST00000598772 TRGC2P03986 189 aa1.53□□□□□ -2.16
HERC3-213ENST00000598772 NDUFV3P56181 108 aaKnown RBP1.53□□□□□ -2.16
HERC3-213ENST00000598772 C2orf91Q6ZV80 131 aa1.53□□□□□ -2.16
HERC3-213ENST00000598772 C1orf64Q8NEQ6 169 aa1.53□□□□□ -2.16
HERC3-213ENST00000598772 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
HERC3-213ENST00000598772 NDUFB1O75438 58 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 PEA15Q15121 130 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 ADM2Q7Z4H4 148 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 PPDPFLQ8WWR9 84 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 URB1-AS1Q96HZ7 61 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 PMCHL2Q9BQD1 86 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 SEC11CQ9BY50 192 aa1.52□□□□□ -2.17
HERC3-213ENST00000598772 FABP2P12104 132 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 Q6ZVQ6 151 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 MUSTN1Q8IVN3 82 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 ANKRD29Q8N6D5 301 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 C8orf17Q9NRJ1 99 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 R4GN34 69 aa1.51□□□□□ -2.17
HERC3-213ENST00000598772 K7EQZ3 153 aa1.5□□□□□ -2.17
HERC3-213ENST00000598772 TIMM17BO60830 172 aa1.49□□□□□ -2.17
HERC3-213ENST00000598772 DPM2O94777 84 aa1.49□□□□□ -2.17
HERC3-213ENST00000598772 TRACP01848 142 aa1.49□□□□□ -2.17
HERC3-213ENST00000598772 PLNP26678 52 aa1.49□□□□□ -2.17
HERC3-213ENST00000598772 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
HERC3-213ENST00000598772 VPS25Q9BRG1 176 aa1.49□□□□□ -2.17
HERC3-213ENST00000598772 TRBV7-4A0A0J9YYF1 115 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 hDV103S1A0JD37 113 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 M0QZ58 72 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 IGKCP01834 107 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 C18orf32Q8TCD1 76 aa1.48□□□□□ -2.17
HERC3-213ENST00000598772 CCKP06307 115 aa1.47□□□□□ -2.17
HERC3-213ENST00000598772 COPS9Q8WXC6 57 aa1.47□□□□□ -2.17
HERC3-213ENST00000598772 J3KT08 172 aa1.46□□□□□ -2.18
HERC3-213ENST00000598772 SNCGO76070 127 aa1.46□□□□□ -2.18
HERC3-213ENST00000598772 SCGB1D4Q6XE38 83 aa1.46□□□□□ -2.18
HERC3-213ENST00000598772 TTTY13Q9BZ97 58 aa1.46□□□□□ -2.18
HERC3-213ENST00000598772 A0A087WVE0 104 aa1.45□□□□□ -2.18
HERC3-213ENST00000598772 E9PLD3 99 aa1.45□□□□□ -2.18
HERC3-213ENST00000598772 S100PP25815 95 aa1.45□□□□□ -2.18
HERC3-213ENST00000598772 BATFQ16520 125 aa1.45□□□□□ -2.18
HERC3-213ENST00000598772 MT1LQ93083 61 aa1.45□□□□□ -2.18
HERC3-213ENST00000598772 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
HERC3-213ENST00000598772 IFITM1P13164 125 aa1.44□□□□□ -2.18
HERC3-213ENST00000598772 FABP4P15090 132 aa1.44□□□□□ -2.18
HERC3-213ENST00000598772 UQCC3Q6UW78 93 aa1.44□□□□□ -2.18
HERC3-213ENST00000598772 HCG22E2RYF7 251 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 NDUFC1O43677 76 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 HSBP1O75506 76 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 LEPROTL1O95214 131 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 COX19Q49B96 90 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 BVES-AS1Q5T3Y7 98 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 TMEM254Q8TBM7 123 aa1.42□□□□□ -2.18
HERC3-213ENST00000598772 A0A1W2PPM0 123 aa1.41□□□□□ -2.18
HERC3-213ENST00000598772 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
HERC3-213ENST00000598772 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
HERC3-213ENST00000598772 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
HERC3-213ENST00000598772 MT-ATP8P03928 68 aa1.4□□□□□ -2.19
HERC3-213ENST00000598772 RGS21Q2M5E4 152 aa1.4□□□□□ -2.19
HERC3-213ENST00000598772 P0C880 135 aa1.39□□□□□ -2.19
HERC3-213ENST00000598772 A0A0D9SG42 100 aa1.38□□□□□ -2.19
HERC3-213ENST00000598772 MMP24-AS1A0A0U1RRL7 71 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms