RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
VRK3-214ENST00000598553 DSCR8Q96T75 97 aa5.78□□□□□ -1.48
VRK3-214ENST00000598553 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
VRK3-214ENST00000598553 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
VRK3-214ENST00000598553 Q5XG85 94 aa5.77□□□□□ -1.49
VRK3-214ENST00000598553 Q6ZQY7 126 aa5.77□□□□□ -1.49
VRK3-214ENST00000598553 ATOX1O00244 68 aa5.76□□□□□ -1.49
VRK3-214ENST00000598553 C1orf195Q5TG92 126 aa5.76□□□□□ -1.49
VRK3-214ENST00000598553 Q6ZQT0 140 aa5.76□□□□□ -1.49
VRK3-214ENST00000598553 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
VRK3-214ENST00000598553 UQCRQO14949 82 aa5.73□□□□□ -1.49
VRK3-214ENST00000598553 IGLV8-61A0A075B6I0 122 aa5.72□□□□□ -1.49
VRK3-214ENST00000598553 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
VRK3-214ENST00000598553 F8WEM9 126 aa5.72□□□□□ -1.49
VRK3-214ENST00000598553 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
VRK3-214ENST00000598553 TRBV7-4A0A0J9YYF1 115 aa5.71□□□□□ -1.5
VRK3-214ENST00000598553 MT1HP80294 61 aa5.71□□□□□ -1.5
VRK3-214ENST00000598553 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
VRK3-214ENST00000598553 COX7CP15954 63 aa5.7□□□□□ -1.5
VRK3-214ENST00000598553 A0A1B0GW54 56 aa5.69□□□□□ -1.5
VRK3-214ENST00000598553 CXCL6P80162 114 aa5.69□□□□□ -1.5
VRK3-214ENST00000598553 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
VRK3-214ENST00000598553 SERP2Q8N6R1 65 aa5.68□□□□□ -1.5
VRK3-214ENST00000598553 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
VRK3-214ENST00000598553 Q6ZVQ6 151 aa5.67□□□□□ -1.5
VRK3-214ENST00000598553 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
VRK3-214ENST00000598553 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
VRK3-214ENST00000598553 A0A087WVE0 104 aa5.63□□□□□ -1.51
VRK3-214ENST00000598553 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
VRK3-214ENST00000598553 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
VRK3-214ENST00000598553 NREPQ16612 68 aa5.61□□□□□ -1.51
VRK3-214ENST00000598553 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
VRK3-214ENST00000598553 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.51
VRK3-214ENST00000598553 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
VRK3-214ENST00000598553 BPY2O14599 106 aa5.57□□□□□ -1.52
VRK3-214ENST00000598553 TMEM258P61165 79 aa5.57□□□□□ -1.52
VRK3-214ENST00000598553 Q75L30 129 aa5.56□□□□□ -1.52
VRK3-214ENST00000598553 Q96NJ1 140 aa5.56□□□□□ -1.52
VRK3-214ENST00000598553 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
VRK3-214ENST00000598553 A0A087WSZ3 146 aa5.53□□□□□ -1.52
VRK3-214ENST00000598553 A0A1W2PNM2 257 aa5.53□□□□□ -1.52
VRK3-214ENST00000598553 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
VRK3-214ENST00000598553 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
VRK3-214ENST00000598553 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
VRK3-214ENST00000598553 M0R2T5 61 aa5.51□□□□□ -1.53
VRK3-214ENST00000598553 NDUFC1O43677 76 aa5.51□□□□□ -1.53
VRK3-214ENST00000598553 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
VRK3-214ENST00000598553 J3KT08 172 aa5.5□□□□□ -1.53
VRK3-214ENST00000598553 DSCR10P59022 87 aa5.5□□□□□ -1.53
VRK3-214ENST00000598553 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
VRK3-214ENST00000598553 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
VRK3-214ENST00000598553 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
VRK3-214ENST00000598553 C20orf197Q8N268 126 aa5.49□□□□□ -1.53
VRK3-214ENST00000598553 A8MUU9 505 aa5.48□□□□□ -1.53
VRK3-214ENST00000598553 NOTCH2NLQ7Z3S9 236 aa5.48□□□□□ -1.53
VRK3-214ENST00000598553 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
VRK3-214ENST00000598553 ATP5EP56381 51 aaPredicted RBP5.46□□□□□ -1.54
VRK3-214ENST00000598553 DEFB116Q30KQ4 102 aa5.45□□□□□ -1.54
VRK3-214ENST00000598553 Q8N9L7 120 aa5.45□□□□□ -1.54
VRK3-214ENST00000598553 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
VRK3-214ENST00000598553 FAM236DA0A1B0GTK5 79 aa5.44□□□□□ -1.54
VRK3-214ENST00000598553 FAM236CP0DP71 79 aa5.44□□□□□ -1.54
VRK3-214ENST00000598553 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
VRK3-214ENST00000598553 H7BZZ5 65 aa5.43□□□□□ -1.54
VRK3-214ENST00000598553 TMEM254Q8TBM7 123 aa5.43□□□□□ -1.54
VRK3-214ENST00000598553 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
VRK3-214ENST00000598553 KRTAP9-8Q9BYQ0 159 aa5.41□□□□□ -1.54
VRK3-214ENST00000598553 K7EQZ3 153 aa5.4□□□□□ -1.54
VRK3-214ENST00000598553 LINC00313P59037 77 aa5.4□□□□□ -1.54
VRK3-214ENST00000598553 LINC00472Q9H8W2 130 aa5.4□□□□□ -1.54
VRK3-214ENST00000598553 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
VRK3-214ENST00000598553 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
VRK3-214ENST00000598553 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
VRK3-214ENST00000598553 HRES1P13985 223 aa5.37□□□□□ -1.55
VRK3-214ENST00000598553 IGHV6-1A0A0B4J1U7 121 aa5.36□□□□□ -1.55
VRK3-214ENST00000598553 A8MWP4 228 aa5.36□□□□□ -1.55
VRK3-214ENST00000598553 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
VRK3-214ENST00000598553 NDUFB1O75438 58 aa5.35□□□□□ -1.55
VRK3-214ENST00000598553 H3BPC8 53 aa5.34□□□□□ -1.55
VRK3-214ENST00000598553 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
VRK3-214ENST00000598553 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
VRK3-214ENST00000598553 MP68P56378 58 aa5.33□□□□□ -1.56
VRK3-214ENST00000598553 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
VRK3-214ENST00000598553 C8orf87E5RJ46 101 aa5.32□□□□□ -1.56
VRK3-214ENST00000598553 MT2AP02795 61 aa5.32□□□□□ -1.56
VRK3-214ENST00000598553 WFDC13Q8IUB5 93 aa5.31□□□□□ -1.56
VRK3-214ENST00000598553 ZCCHC13Q8WW36 166 aaKnown RBP5.31□□□□□ -1.56
VRK3-214ENST00000598553 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
VRK3-214ENST00000598553 MT1FP04733 61 aa5.3□□□□□ -1.56
VRK3-214ENST00000598553 KRTAP3-3Q9BYR6 98 aa5.3□□□□□ -1.56
VRK3-214ENST00000598553 KRTAP3-2Q9BYR7 98 aa5.3□□□□□ -1.56
VRK3-214ENST00000598553 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
VRK3-214ENST00000598553 RBM12B-AS1Q9P1G2 102 aa5.29□□□□□ -1.56
VRK3-214ENST00000598553 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
VRK3-214ENST00000598553 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
VRK3-214ENST00000598553 MMP24-AS1A0A0U1RRL7 71 aa5.26□□□□□ -1.57
VRK3-214ENST00000598553 LCE2BO14633 110 aa5.26□□□□□ -1.57
VRK3-214ENST00000598553 H0Y9P7 68 aa5.25□□□□□ -1.57
VRK3-214ENST00000598553 TRAV22A0A0B4J277 110 aa5.24□□□□□ -1.57
VRK3-214ENST00000598553 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms