RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 TSTD3H0UI37 97 aa7.92□□□□□ -1.14
LIG1-214ENST00000597146 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
LIG1-214ENST00000597146 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
LIG1-214ENST00000597146 RBM3P98179 157 aaKnown RBP7.92□□□□□ -1.14
LIG1-214ENST00000597146 DSCR8Q96T75 97 aa7.92□□□□□ -1.14
LIG1-214ENST00000597146 Q75L30 129 aa7.91□□□□□ -1.14
LIG1-214ENST00000597146 DSCR10P59022 87 aa7.88□□□□□ -1.15
LIG1-214ENST00000597146 LINC00313P59037 77 aa7.88□□□□□ -1.15
LIG1-214ENST00000597146 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
LIG1-214ENST00000597146 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
LIG1-214ENST00000597146 C9JAW5 83 aa7.87□□□□□ -1.15
LIG1-214ENST00000597146 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
LIG1-214ENST00000597146 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
LIG1-214ENST00000597146 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
LIG1-214ENST00000597146 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
LIG1-214ENST00000597146 BATFQ16520 125 aa7.85□□□□□ -1.15
LIG1-214ENST00000597146 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
LIG1-214ENST00000597146 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
LIG1-214ENST00000597146 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
LIG1-214ENST00000597146 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
LIG1-214ENST00000597146 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
LIG1-214ENST00000597146 A8MUU9 505 aa7.8□□□□□ -1.16
LIG1-214ENST00000597146 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
LIG1-214ENST00000597146 LINC00472Q9H8W2 130 aa7.8□□□□□ -1.16
LIG1-214ENST00000597146 MUC12Q9UKN1 5478 aa7.77□□□□□ -1.17
LIG1-214ENST00000597146 J3KT08 172 aa7.76□□□□□ -1.17
LIG1-214ENST00000597146 NDUFB1O75438 58 aa7.76□□□□□ -1.17
LIG1-214ENST00000597146 PDE6GP18545 87 aa7.75□□□□□ -1.17
LIG1-214ENST00000597146 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
LIG1-214ENST00000597146 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
LIG1-214ENST00000597146 KRTAP20-1Q3LI63 56 aa7.73□□□□□ -1.17
LIG1-214ENST00000597146 Q6ZQT0 140 aa7.73□□□□□ -1.17
LIG1-214ENST00000597146 A0A1B0GV90 55 aa7.72□□□□□ -1.17
LIG1-214ENST00000597146 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
LIG1-214ENST00000597146 A0A1B0GW54 56 aa7.71□□□□□ -1.18
LIG1-214ENST00000597146 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
LIG1-214ENST00000597146 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
LIG1-214ENST00000597146 C9orf118A6NHY6 69 aa7.69□□□□□ -1.18
LIG1-214ENST00000597146 FAM236DA0A1B0GTK5 79 aa7.68□□□□□ -1.18
LIG1-214ENST00000597146 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
LIG1-214ENST00000597146 FAM236CP0DP71 79 aa7.68□□□□□ -1.18
LIG1-214ENST00000597146 NREPQ16612 68 aa7.68□□□□□ -1.18
LIG1-214ENST00000597146 A0A1W2PPM0 123 aa7.64□□□□□ -1.19
LIG1-214ENST00000597146 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
LIG1-214ENST00000597146 A8MWP4 228 aa7.62□□□□□ -1.19
LIG1-214ENST00000597146 TAX1BP3O14907 124 aa7.62□□□□□ -1.19
LIG1-214ENST00000597146 COL5A1-AS1Q5SY13 56 aa7.62□□□□□ -1.19
LIG1-214ENST00000597146 H3BT86 120 aa7.61□□□□□ -1.19
LIG1-214ENST00000597146 MTURNQ8N3F0 131 aa7.6□□□□□ -1.19
LIG1-214ENST00000597146 C8orf17Q9NRJ1 99 aa7.59□□□□□ -1.19
LIG1-214ENST00000597146 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
LIG1-214ENST00000597146 IGKV3D-7A0A0C4DH55 119 aa7.57□□□□□ -1.2
LIG1-214ENST00000597146 SPCS1Q9Y6A9 102 aa7.57□□□□□ -1.2
LIG1-214ENST00000597146 Q6ZVQ6 151 aa7.55□□□□□ -1.2
LIG1-214ENST00000597146 PRR15Q8IV56 129 aa7.55□□□□□ -1.2
LIG1-214ENST00000597146 SPINK7P58062 85 aa7.53□□□□□ -1.2
LIG1-214ENST00000597146 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
LIG1-214ENST00000597146 BPY2O14599 106 aa7.52□□□□□ -1.21
LIG1-214ENST00000597146 NDUFS5O43920 106 aa7.52□□□□□ -1.21
LIG1-214ENST00000597146 MPLKIPQ8TAP9 179 aa7.52□□□□□ -1.21
LIG1-214ENST00000597146 HRES1P13985 223 aa7.5□□□□□ -1.21
LIG1-214ENST00000597146 MRPL34Q9BQ48 92 aaKnown RBP7.49□□□□□ -1.21
LIG1-214ENST00000597146 TMEM254Q8TBM7 123 aa7.48□□□□□ -1.21
LIG1-214ENST00000597146 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
LIG1-214ENST00000597146 K7EQZ3 153 aa7.45□□□□□ -1.22
LIG1-214ENST00000597146 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
LIG1-214ENST00000597146 MMP24-AS1A0A0U1RRL7 71 aa7.43□□□□□ -1.22
LIG1-214ENST00000597146 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
LIG1-214ENST00000597146 K7EP34 96 aa7.41□□□□□ -1.22
LIG1-214ENST00000597146 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
LIG1-214ENST00000597146 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
LIG1-214ENST00000597146 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
LIG1-214ENST00000597146 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
LIG1-214ENST00000597146 KMT2DO14686 5537 aa7.39□□□□□ -1.23
LIG1-214ENST00000597146 Q8N9L7 120 aa7.37□□□□□ -1.23
LIG1-214ENST00000597146 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
LIG1-214ENST00000597146 HCG22E2RYF7 251 aa7.34□□□□□ -1.23
LIG1-214ENST00000597146 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
LIG1-214ENST00000597146 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
LIG1-214ENST00000597146 F8W1H4 67 aa7.32□□□□□ -1.24
LIG1-214ENST00000597146 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
LIG1-214ENST00000597146 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
LIG1-214ENST00000597146 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
LIG1-214ENST00000597146 CXCL6P80162 114 aa7.29□□□□□ -1.24
LIG1-214ENST00000597146 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
LIG1-214ENST00000597146 A6NN06 94 aa7.27□□□□□ -1.25
LIG1-214ENST00000597146 Q5W150 140 aa7.27□□□□□ -1.25
LIG1-214ENST00000597146 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
LIG1-214ENST00000597146 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
LIG1-214ENST00000597146 K7ERU9 68 aa7.18□□□□□ -1.26
LIG1-214ENST00000597146 C4orf26Q17RF5 130 aa7.18□□□□□ -1.26
LIG1-214ENST00000597146 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
LIG1-214ENST00000597146 ACYP1P07311 99 aa7.14□□□□□ -1.27
LIG1-214ENST00000597146 MT1BP07438 61 aa7.11□□□□□ -1.27
LIG1-214ENST00000597146 HIST1H4AP62805 103 aaKnown RBP7.08□□□□□ -1.28
LIG1-214ENST00000597146 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
LIG1-214ENST00000597146 J3QR89 54 aa7.06□□□□□ -1.28
LIG1-214ENST00000597146 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
LIG1-214ENST00000597146 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
LIG1-214ENST00000597146 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms