RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
NOTCH3-202ENST00000595045 SCGB1C2P0DMR2 95 aa4.9□□□□□ -1.63
NOTCH3-202ENST00000595045 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
NOTCH3-202ENST00000595045 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
NOTCH3-202ENST00000595045 A0A087WSZ3 146 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 H0YGX0 51 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 SNCGO76070 127 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
NOTCH3-202ENST00000595045 A8MUU9 505 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 H3BT86 120 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 SMCPP49901 116 aaPredicted RBP4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 DSCR10P59022 87 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
NOTCH3-202ENST00000595045 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
NOTCH3-202ENST00000595045 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
NOTCH3-202ENST00000595045 ACYP1P07311 99 aa4.86□□□□□ -1.63
NOTCH3-202ENST00000595045 PSMB2P49721 201 aa4.86□□□□□ -1.63
NOTCH3-202ENST00000595045 ANKRD29Q8N6D5 301 aa4.85□□□□□ -1.63
NOTCH3-202ENST00000595045 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
NOTCH3-202ENST00000595045 A0A1W2PNM2 257 aa4.84□□□□□ -1.63
NOTCH3-202ENST00000595045 COX6CP09669 75 aa4.84□□□□□ -1.63
NOTCH3-202ENST00000595045 A0A1B0GX51 115 aa4.82□□□□□ -1.64
NOTCH3-202ENST00000595045 TRIAP1O43715 76 aa4.82□□□□□ -1.64
NOTCH3-202ENST00000595045 IGKV4-1P06312 121 aa4.82□□□□□ -1.64
NOTCH3-202ENST00000595045 DEFB116Q30KQ4 102 aa4.82□□□□□ -1.64
NOTCH3-202ENST00000595045 C9JAW5 83 aa4.81□□□□□ -1.64
NOTCH3-202ENST00000595045 GHRHP01286 108 aa4.81□□□□□ -1.64
NOTCH3-202ENST00000595045 HRES1P13985 223 aa4.81□□□□□ -1.64
NOTCH3-202ENST00000595045 LINC00313P59037 77 aa4.81□□□□□ -1.64
NOTCH3-202ENST00000595045 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
NOTCH3-202ENST00000595045 NEBP20929 6669 aa4.8□□□□□ -1.64
NOTCH3-202ENST00000595045 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
NOTCH3-202ENST00000595045 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
NOTCH3-202ENST00000595045 DNAL4O96015 105 aa4.79□□□□□ -1.64
NOTCH3-202ENST00000595045 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
NOTCH3-202ENST00000595045 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
NOTCH3-202ENST00000595045 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
NOTCH3-202ENST00000595045 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
NOTCH3-202ENST00000595045 CCKP06307 115 aa4.76□□□□□ -1.65
NOTCH3-202ENST00000595045 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
NOTCH3-202ENST00000595045 TMEM256-PLSCR3K7ERE1 68 aa4.75□□□□□ -1.65
NOTCH3-202ENST00000595045 UQCRQO14949 82 aa4.75□□□□□ -1.65
NOTCH3-202ENST00000595045 TRACP01848 142 aa4.75□□□□□ -1.65
NOTCH3-202ENST00000595045 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
NOTCH3-202ENST00000595045 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
NOTCH3-202ENST00000595045 ATOX1O00244 68 aa4.73□□□□□ -1.65
NOTCH3-202ENST00000595045 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
NOTCH3-202ENST00000595045 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
NOTCH3-202ENST00000595045 H3BQ85 93 aa4.72□□□□□ -1.65
NOTCH3-202ENST00000595045 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
NOTCH3-202ENST00000595045 J3KT08 172 aa4.71□□□□□ -1.66
NOTCH3-202ENST00000595045 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
NOTCH3-202ENST00000595045 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
NOTCH3-202ENST00000595045 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
NOTCH3-202ENST00000595045 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 COX7CP15954 63 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 TMEM258P61165 79 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
NOTCH3-202ENST00000595045 C8orf87E5RJ46 101 aa4.68□□□□□ -1.66
NOTCH3-202ENST00000595045 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
NOTCH3-202ENST00000595045 BAALC-AS2P0C853 105 aa4.67□□□□□ -1.66
NOTCH3-202ENST00000595045 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
NOTCH3-202ENST00000595045 ZCCHC13Q8WW36 166 aaKnown RBP4.66□□□□□ -1.66
NOTCH3-202ENST00000595045 SPINK7P58062 85 aa4.65□□□□□ -1.67
NOTCH3-202ENST00000595045 Q6ZQT0 140 aa4.63□□□□□ -1.67
NOTCH3-202ENST00000595045 SERP2Q8N6R1 65 aa4.63□□□□□ -1.67
NOTCH3-202ENST00000595045 Q8N9P0 234 aaPredicted RBP4.63□□□□□ -1.67
NOTCH3-202ENST00000595045 NDUFB1O75438 58 aa4.62□□□□□ -1.67
NOTCH3-202ENST00000595045 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
NOTCH3-202ENST00000595045 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
NOTCH3-202ENST00000595045 KMT2DO14686 5537 aa4.6□□□□□ -1.67
NOTCH3-202ENST00000595045 A8MWP4 228 aa4.59□□□□□ -1.67
NOTCH3-202ENST00000595045 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
NOTCH3-202ENST00000595045 IGKV3D-7A0A0C4DH55 119 aa4.58□□□□□ -1.68
NOTCH3-202ENST00000595045 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
NOTCH3-202ENST00000595045 C14orf132Q9NPU4 83 aa4.57□□□□□ -1.68
NOTCH3-202ENST00000595045 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
NOTCH3-202ENST00000595045 PDE6GP18545 87 aa4.56□□□□□ -1.68
NOTCH3-202ENST00000595045 Q6ZVQ6 151 aa4.56□□□□□ -1.68
NOTCH3-202ENST00000595045 NDUFC1O43677 76 aa4.54□□□□□ -1.68
NOTCH3-202ENST00000595045 NREPQ16612 68 aa4.54□□□□□ -1.68
NOTCH3-202ENST00000595045 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
NOTCH3-202ENST00000595045 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
NOTCH3-202ENST00000595045 A0A1B0GW54 56 aa4.52□□□□□ -1.69
NOTCH3-202ENST00000595045 NDUFS5O43920 106 aa4.52□□□□□ -1.69
NOTCH3-202ENST00000595045 MRPL34Q9BQ48 92 aaKnown RBP4.52□□□□□ -1.69
NOTCH3-202ENST00000595045 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
NOTCH3-202ENST00000595045 TRAV7A0A075B6U4 112 aa4.51□□□□□ -1.69
NOTCH3-202ENST00000595045 MMP24-AS1A0A0U1RRL7 71 aa4.51□□□□□ -1.69
NOTCH3-202ENST00000595045 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
NOTCH3-202ENST00000595045 KLKP1Q107X0 134 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms