RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 KRTAP15-1Q3LI76 137 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 LINC00308Q8TCZ7 52 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 RAB37Q96AX2 223 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 SNHG12Q9BXW3 62 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 LINC01546A6NGU7 62 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 LINC01549A6NIU2 74 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 M0QZ58 72 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 IFITM3Q01628 133 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 LCE3AQ5TA76 89 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 LINC00575Q6W349 94 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 ATP5L2Q7Z4Y8 100 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 C1orf64Q8NEQ6 169 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 R4GN34 69 aa0.89□□□□□ -2.27
VRK3-204ENST00000593912 hADV29S1A0JD25 119 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 A4D1N5 150 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 J3QQQ9 107 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 LEPROTO15243 131 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 SERF1AO75920 110 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 SCGB1D1O95968 90 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 C2orf91Q6ZV80 131 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 SMIM11BQ8TCY0 68 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 TRAPPC1Q9Y5R8 145 aa0.88□□□□□ -2.27
VRK3-204ENST00000593912 KANTRA0A1W2PQU2 76 aa0.87□□□□□ -2.27
VRK3-204ENST00000593912 A6NDN8 102 aa0.87□□□□□ -2.27
VRK3-204ENST00000593912 SRP19P09132 144 aaKnown RBP0.87□□□□□ -2.27
VRK3-204ENST00000593912 IFITM2Q01629 132 aa0.87□□□□□ -2.27
VRK3-204ENST00000593912 C8orf17Q9NRJ1 99 aa0.87□□□□□ -2.27
VRK3-204ENST00000593912 SMCO4Q9NRQ5 59 aa0.87□□□□□ -2.27
VRK3-204ENST00000593912 A0A0D9SG42 100 aa0.86□□□□□ -2.27
VRK3-204ENST00000593912 A0A1W2PPM0 123 aa0.86□□□□□ -2.27
VRK3-204ENST00000593912 C9JQL5 133 aa0.86□□□□□ -2.27
VRK3-204ENST00000593912 P0C880 135 aa0.86□□□□□ -2.27
VRK3-204ENST00000593912 Q6ZVQ6 151 aa0.86□□□□□ -2.27
VRK3-204ENST00000593912 A0A1B0GV72 72 aa0.85□□□□□ -2.27
VRK3-204ENST00000593912 NDUFV3P56181 108 aaKnown RBP0.85□□□□□ -2.27
VRK3-204ENST00000593912 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.85□□□□□ -2.27
VRK3-204ENST00000593912 URB1-AS1Q96HZ7 61 aa0.85□□□□□ -2.27
VRK3-204ENST00000593912 H3BMG7 143 aa0.84□□□□□ -2.27
VRK3-204ENST00000593912 NDUFS5O43920 106 aa0.84□□□□□ -2.27
VRK3-204ENST00000593912 LCE1BQ5T7P3 118 aa0.84□□□□□ -2.27
VRK3-204ENST00000593912 PPDPFLQ8WWR9 84 aa0.84□□□□□ -2.27
VRK3-204ENST00000593912 NAT8Q9UHE5 227 aa0.84□□□□□ -2.27
VRK3-204ENST00000593912 TRAV12-1A0A0B4J245 112 aa0.83□□□□□ -2.28
VRK3-204ENST00000593912 TRBV7-4A0A0J9YYF1 115 aa0.83□□□□□ -2.28
VRK3-204ENST00000593912 H0Y8G0 127 aa0.83□□□□□ -2.28
VRK3-204ENST00000593912 MT1AP04731 61 aa0.83□□□□□ -2.28
VRK3-204ENST00000593912 hDV103S1A0JD37 113 aa0.82□□□□□ -2.28
VRK3-204ENST00000593912 TIMM17BO60830 172 aa0.82□□□□□ -2.28
VRK3-204ENST00000593912 MUSTN1Q8IVN3 82 aa0.82□□□□□ -2.28
VRK3-204ENST00000593912 MRPL34Q9BQ48 92 aaKnown RBP0.82□□□□□ -2.28
VRK3-204ENST00000593912 TRACP01848 142 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 VAMP3Q15836 100 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 BATFQ16520 125 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 LCE1CQ5T751 118 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 TCTE3Q8IZS6 198 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 IFI27L1Q96BM0 104 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 PMCHL2Q9BQD1 86 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 HSPB8Q9UJY1 196 aa0.81□□□□□ -2.28
VRK3-204ENST00000593912 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 NDUFB1O75438 58 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 CCKP06307 115 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 LINC00614P0C842 121 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 HERVK_113P61574 105 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 TMEM254Q8TBM7 123 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 TTTY13Q9BZ97 58 aa0.8□□□□□ -2.28
VRK3-204ENST00000593912 HCG22E2RYF7 251 aa0.79□□□□□ -2.28
VRK3-204ENST00000593912 TRGC2P03986 189 aa0.79□□□□□ -2.28
VRK3-204ENST00000593912 ANKRD29Q8N6D5 301 aa0.79□□□□□ -2.28
VRK3-204ENST00000593912 C12orf57Q99622 126 aa0.79□□□□□ -2.28
VRK3-204ENST00000593912 J3KT08 172 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 NDUFC1O43677 76 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 FABP2P12104 132 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 BLOC1S1P78537 153 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 C18orf32Q8TCD1 76 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 VPS25Q9BRG1 176 aa0.78□□□□□ -2.28
VRK3-204ENST00000593912 MUC19Q7Z5P9 8384 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 MT-ATP8P03928 68 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 MT3P25713 68 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 FABP9Q0Z7S8 132 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 Q6ZQT0 140 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 S100ZQ8WXG8 99 aa0.77□□□□□ -2.29
VRK3-204ENST00000593912 E9PLD3 99 aa0.76□□□□□ -2.29
VRK3-204ENST00000593912 DPM2O94777 84 aa0.76□□□□□ -2.29
VRK3-204ENST00000593912 IGKCP01834 107 aa0.76□□□□□ -2.29
VRK3-204ENST00000593912 PLNP26678 52 aa0.76□□□□□ -2.29
VRK3-204ENST00000593912 CAMK2N1Q7Z7J9 78 aa0.76□□□□□ -2.29
VRK3-204ENST00000593912 A6NJY4 79 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 K7EP34 96 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 IFITM1P13164 125 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 LCE1FQ5T754 118 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 SLC51BQ86UW2 128 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 SEC11CQ9BY50 192 aa0.75□□□□□ -2.29
VRK3-204ENST00000593912 C20orf197Q8N268 126 aa0.74□□□□□ -2.29
VRK3-204ENST00000593912 MT-ND4LP03901 98 aa0.73□□□□□ -2.29
VRK3-204ENST00000593912 BVES-AS1Q5T3Y7 98 aa0.73□□□□□ -2.29
VRK3-204ENST00000593912 UQCC3Q6UW78 93 aa0.72□□□□□ -2.29
VRK3-204ENST00000593912 SCGB1D4Q6XE38 83 aa0.72□□□□□ -2.29
VRK3-204ENST00000593912 COPS9Q8WXC6 57 aa0.72□□□□□ -2.29
VRK3-204ENST00000593912 KRTAP12-3P60328 96 aa0.71□□□□□ -2.3
VRK3-204ENST00000593912 PEA15Q15121 130 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms