RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
SMARCA4-219ENST00000592604 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
SMARCA4-219ENST00000592604 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
SMARCA4-219ENST00000592604 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
SMARCA4-219ENST00000592604 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
SMARCA4-219ENST00000592604 PLECQ15149 4684 aaKnown RBP8.89□□□□□ -0.99
SMARCA4-219ENST00000592604 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
SMARCA4-219ENST00000592604 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
SMARCA4-219ENST00000592604 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
SMARCA4-219ENST00000592604 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
SMARCA4-219ENST00000592604 IGLV5-52A0A0A0MRZ9 124 aa8.84□□□□□ -0.99
SMARCA4-219ENST00000592604 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
SMARCA4-219ENST00000592604 NUPR2A6NF83 97 aa8.83□□□□□ -1
SMARCA4-219ENST00000592604 A0A087X002 238 aa8.83□□□□□ -1
SMARCA4-219ENST00000592604 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
SMARCA4-219ENST00000592604 A0A087WTM6 91 aa8.82□□□□□ -1
SMARCA4-219ENST00000592604 ZNF861PO60384 105 aa8.82□□□□□ -1
SMARCA4-219ENST00000592604 HRES1P13985 223 aa8.82□□□□□ -1
SMARCA4-219ENST00000592604 ANAPC11Q9NYG5 84 aa8.8□□□□□ -1
SMARCA4-219ENST00000592604 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
SMARCA4-219ENST00000592604 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
SMARCA4-219ENST00000592604 VPS13DQ5THJ4 4388 aa8.79□□□□□ -1
SMARCA4-219ENST00000592604 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
SMARCA4-219ENST00000592604 A0A0A0MQY5 61 aa8.77□□□□□ -1.01
SMARCA4-219ENST00000592604 RTL8CO15255 209 aa8.77□□□□□ -1.01
SMARCA4-219ENST00000592604 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
SMARCA4-219ENST00000592604 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
SMARCA4-219ENST00000592604 SPINK7P58062 85 aa8.74□□□□□ -1.01
SMARCA4-219ENST00000592604 FRAS1Q86XX4 4008 aa8.74□□□□□ -1.01
SMARCA4-219ENST00000592604 Q5W150 140 aa8.74□□□□□ -1.01
SMARCA4-219ENST00000592604 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
SMARCA4-219ENST00000592604 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.01
SMARCA4-219ENST00000592604 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
SMARCA4-219ENST00000592604 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
SMARCA4-219ENST00000592604 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
SMARCA4-219ENST00000592604 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
SMARCA4-219ENST00000592604 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-219ENST00000592604 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
SMARCA4-219ENST00000592604 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
SMARCA4-219ENST00000592604 ACYP2P14621 99 aa8.65□□□□□ -1.03
SMARCA4-219ENST00000592604 DNAH2Q9P225 4427 aa8.63□□□□□ -1.03
SMARCA4-219ENST00000592604 KMT2AQ03164 3969 aa8.61□□□□□ -1.03
SMARCA4-219ENST00000592604 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
SMARCA4-219ENST00000592604 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
SMARCA4-219ENST00000592604 C1orf134Q5TEV5 83 aa8.59□□□□□ -1.03
SMARCA4-219ENST00000592604 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
SMARCA4-219ENST00000592604 FBN3Q75N90 2809 aa8.55□□□□□ -1.04
SMARCA4-219ENST00000592604 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
SMARCA4-219ENST00000592604 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
SMARCA4-219ENST00000592604 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
SMARCA4-219ENST00000592604 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
SMARCA4-219ENST00000592604 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
SMARCA4-219ENST00000592604 TGP01266 2768 aa8.48□□□□□ -1.05
SMARCA4-219ENST00000592604 A0A1B0GU69 56 aa8.45□□□□□ -1.06
SMARCA4-219ENST00000592604 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
SMARCA4-219ENST00000592604 DNAH5Q8TE73 4624 aa8.45□□□□□ -1.06
SMARCA4-219ENST00000592604 ROMO1P60602 79 aa8.44□□□□□ -1.06
SMARCA4-219ENST00000592604 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
SMARCA4-219ENST00000592604 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
SMARCA4-219ENST00000592604 Q6ZSA8 131 aa8.38□□□□□ -1.07
SMARCA4-219ENST00000592604 LY6G6CO95867 125 aa8.38□□□□□ -1.07
SMARCA4-219ENST00000592604 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
SMARCA4-219ENST00000592604 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
SMARCA4-219ENST00000592604 UQCR11O14957 56 aa8.34□□□□□ -1.07
SMARCA4-219ENST00000592604 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.07
SMARCA4-219ENST00000592604 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
SMARCA4-219ENST00000592604 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SMARCA4-219ENST00000592604 PKD1P98161 4303 aa8.28□□□□□ -1.08
SMARCA4-219ENST00000592604 SPINK1P00995 79 aa8.27□□□□□ -1.09
SMARCA4-219ENST00000592604 P0C880 135 aa8.27□□□□□ -1.09
SMARCA4-219ENST00000592604 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
SMARCA4-219ENST00000592604 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
SMARCA4-219ENST00000592604 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
SMARCA4-219ENST00000592604 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
SMARCA4-219ENST00000592604 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
SMARCA4-219ENST00000592604 Q8N1X5 172 aa8.17□□□□□ -1.1
SMARCA4-219ENST00000592604 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.1
SMARCA4-219ENST00000592604 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
SMARCA4-219ENST00000592604 HYDINQ4G0P3 5121 aa8.13□□□□□ -1.11
SMARCA4-219ENST00000592604 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
SMARCA4-219ENST00000592604 A8MUU9 505 aa8.06□□□□□ -1.12
SMARCA4-219ENST00000592604 C20orf166-AS1Q96NR2 134 aa8.06□□□□□ -1.12
SMARCA4-219ENST00000592604 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
SMARCA4-219ENST00000592604 H0YAA0 97 aa8.02□□□□□ -1.13
SMARCA4-219ENST00000592604 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
SMARCA4-219ENST00000592604 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
SMARCA4-219ENST00000592604 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
SMARCA4-219ENST00000592604 A0A1B0GU33 70 aa7.96□□□□□ -1.14
SMARCA4-219ENST00000592604 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
SMARCA4-219ENST00000592604 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
SMARCA4-219ENST00000592604 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
SMARCA4-219ENST00000592604 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
SMARCA4-219ENST00000592604 KRTAP21-3Q3LHN1 58 aa7.88□□□□□ -1.15
SMARCA4-219ENST00000592604 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-219ENST00000592604 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-219ENST00000592604 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SMARCA4-219ENST00000592604 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
SMARCA4-219ENST00000592604 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
SMARCA4-219ENST00000592604 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
SMARCA4-219ENST00000592604 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms